RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 ZNF816Q0VGE8 651 aaPredicted RBP7.85□□□□□ -1.15
CLK3-208ENST00000562626 GLDNQ6ZMI3 551 aaPredicted RBP7.85□□□□□ -1.15
CLK3-208ENST00000562626 ZNF833PQ6ZTB9 187 aa7.85□□□□□ -1.15
CLK3-208ENST00000562626 CCDC190Q86UF4 302 aa7.85□□□□□ -1.15
CLK3-208ENST00000562626 OR2AK2Q8NG84 335 aa7.85□□□□□ -1.15
CLK3-208ENST00000562626 OR6Q1Q8NGQ2 317 aa7.85□□□□□ -1.15
CLK3-208ENST00000562626 OR56B4Q8NH76 319 aa7.85□□□□□ -1.15
CLK3-208ENST00000562626 RTN4IP1Q8WWV3 396 aaPredicted RBP7.85□□□□□ -1.15
CLK3-208ENST00000562626 MRPL20Q9BYC9 149 aaKnown RBP7.85□□□□□ -1.15
CLK3-208ENST00000562626 MMP27Q9H306 513 aa7.85□□□□□ -1.15
CLK3-208ENST00000562626 RAB9BQ9NP90 201 aa7.85□□□□□ -1.15
CLK3-208ENST00000562626 KLK11Q9UBX7 282 aa7.85□□□□□ -1.15
CLK3-208ENST00000562626 VPREB3Q9UKI3 123 aa7.85□□□□□ -1.15
CLK3-208ENST00000562626 A6NDX4 124 aa7.84□□□□□ -1.15
CLK3-208ENST00000562626 FAM181BA6NEQ2 426 aa7.84□□□□□ -1.15
CLK3-208ENST00000562626 FAM90A9PA6NNJ1 464 aa7.84□□□□□ -1.15
CLK3-208ENST00000562626 CLDN34H7C241 214 aa7.84□□□□□ -1.15
CLK3-208ENST00000562626 ITGB1BP1O14713 200 aa7.84□□□□□ -1.15
CLK3-208ENST00000562626 GPR137BO60478 399 aa7.84□□□□□ -1.15
CLK3-208ENST00000562626 TUSC2O75896 110 aa7.84□□□□□ -1.15
CLK3-208ENST00000562626 IFNA2P01563 188 aa7.84□□□□□ -1.15
CLK3-208ENST00000562626 IGLV2-14P01704 120 aa7.84□□□□□ -1.15
CLK3-208ENST00000562626 PMP2P02689 132 aa7.84□□□□□ -1.15
CLK3-208ENST00000562626 OR8U9P0C7N5 309 aa7.84□□□□□ -1.15
CLK3-208ENST00000562626 AADACP22760 399 aa7.84□□□□□ -1.15
CLK3-208ENST00000562626 HLA-DMAP28067 261 aa7.84□□□□□ -1.15
CLK3-208ENST00000562626 RFX2P48378 723 aa7.84□□□□□ -1.15
CLK3-208ENST00000562626 SCGB2A2Q13296 93 aa7.84□□□□□ -1.15
CLK3-208ENST00000562626 IL18Q14116 193 aa7.84□□□□□ -1.15
CLK3-208ENST00000562626 HABP2Q14520 560 aaPredicted RBP7.84□□□□□ -1.15
CLK3-208ENST00000562626 ZNF660Q6AZW8 331 aaPredicted RBP7.84□□□□□ -1.15
CLK3-208ENST00000562626 RBMS3Q6XE24 437 aaKnown RBP7.84□□□□□ -1.15
CLK3-208ENST00000562626 OR8U1Q8NH10 309 aa7.84□□□□□ -1.15
CLK3-208ENST00000562626 OR10J5Q8NHC4 309 aa7.84□□□□□ -1.15
CLK3-208ENST00000562626 SSMEM1Q8WWF3 244 aa7.84□□□□□ -1.15
CLK3-208ENST00000562626 RPEQ96AT9 228 aa7.84□□□□□ -1.15
CLK3-208ENST00000562626 RITA1Q96K30 269 aa7.84□□□□□ -1.15
CLK3-208ENST00000562626 GPHA2Q96T91 129 aa7.84□□□□□ -1.15
CLK3-208ENST00000562626 SCPEP1Q9HB40 452 aa7.84□□□□□ -1.15
CLK3-208ENST00000562626 IFT46Q9NQC8 304 aa7.84□□□□□ -1.15
CLK3-208ENST00000562626 TCF19Q9Y242 345 aa7.84□□□□□ -1.15
CLK3-208ENST00000562626 AMMECR1Q9Y4X0 333 aaPredicted RBP7.84□□□□□ -1.15
CLK3-208ENST00000562626 A3GALT2U3KPV4 340 aa7.84□□□□□ -1.15
CLK3-208ENST00000562626 COL6A5A8TX70 2615 aa7.83□□□□□ -1.16
CLK3-208ENST00000562626 A0A0A6YYJ9 748 aa7.83□□□□□ -1.16
CLK3-208ENST00000562626 SH2D7A6NKC9 451 aaPredicted RBP7.83□□□□□ -1.16
CLK3-208ENST00000562626 M0QYG6 137 aa7.83□□□□□ -1.16
CLK3-208ENST00000562626 RGS11O94810 467 aa7.83□□□□□ -1.16
CLK3-208ENST00000562626 DIRAS3O95661 229 aa7.83□□□□□ -1.16
CLK3-208ENST00000562626 SNRNP70P08621 437 aaKnown RBP7.83□□□□□ -1.16
CLK3-208ENST00000562626 CT45A6P0DMU7 189 aa7.83□□□□□ -1.16
CLK3-208ENST00000562626 CT45A5P0DMU8 189 aa7.83□□□□□ -1.16
CLK3-208ENST00000562626 CT45A7P0DMV0 189 aa7.83□□□□□ -1.16
CLK3-208ENST00000562626 FCGR2CP31995 323 aa7.83□□□□□ -1.16
CLK3-208ENST00000562626 HRH1P35367 487 aa7.83□□□□□ -1.16
CLK3-208ENST00000562626 CEACAM3P40198 252 aa7.83□□□□□ -1.16
CLK3-208ENST00000562626 CBX5P45973 191 aa7.83□□□□□ -1.16
CLK3-208ENST00000562626 DYNLT3P51808 116 aa7.83□□□□□ -1.16
CLK3-208ENST00000562626 AANATQ16613 207 aa7.83□□□□□ -1.16
CLK3-208ENST00000562626 FAAP20Q6NZ36 180 aa7.83□□□□□ -1.16
CLK3-208ENST00000562626 Q6ZS46 218 aa7.83□□□□□ -1.16
CLK3-208ENST00000562626 MOB3BQ86TA1 216 aa7.83□□□□□ -1.16
CLK3-208ENST00000562626 TMEM86BQ8N661 226 aa7.83□□□□□ -1.16
CLK3-208ENST00000562626 DRAXINQ8NBI3 349 aaPredicted RBP7.83□□□□□ -1.16
CLK3-208ENST00000562626 OR5AP2Q8NGF4 316 aa7.83□□□□□ -1.16
CLK3-208ENST00000562626 OR4D10Q8NGI6 311 aa7.83□□□□□ -1.16
CLK3-208ENST00000562626 SMIM4Q8WVI0 70 aa7.83□□□□□ -1.16
CLK3-208ENST00000562626 SDHCQ99643 169 aaPredicted RBP7.83□□□□□ -1.16
CLK3-208ENST00000562626 NABP2Q9BQ15 211 aa7.83□□□□□ -1.16
CLK3-208ENST00000562626 GINS4Q9BRT9 223 aa7.83□□□□□ -1.16
CLK3-208ENST00000562626 TINAGL1Q9GZM7 467 aaPredicted RBP7.83□□□□□ -1.16
CLK3-208ENST00000562626 OR2D2Q9H210 308 aa7.83□□□□□ -1.16
CLK3-208ENST00000562626 SDHAF2Q9NX18 166 aa7.83□□□□□ -1.16
CLK3-208ENST00000562626 MTFP1Q9UDX5 166 aa7.83□□□□□ -1.16
CLK3-208ENST00000562626 RBMX2Q9Y388 322 aaKnown RBP7.83□□□□□ -1.16
CLK3-208ENST00000562626 POMT1Q9Y6A1 747 aa7.83□□□□□ -1.16
CLK3-208ENST00000562626 FABP12A6NFH5 140 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 OOSP1A8MZH6 123 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 GABARAPH6UMI1 98 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 SULT1C2O00338 296 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 IGKV1D-33P01593 117 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 IGKV1-33P01594 117 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 GAPDHP04406 335 aaKnown RBP7.82□□□□□ -1.16
CLK3-208ENST00000562626 AMY1AP04745 511 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 AMY2AP04746 511 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 OR5H8P0DN80 308 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 CNTFRP26992 372 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 RCVRNP35243 200 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 RAB7AP51149 207 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 ARPC4P59998 168 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 LSAMPQ13449 338 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 EIF4EBP1Q13541 118 aaPredicted RBP7.82□□□□□ -1.16
CLK3-208ENST00000562626 HNF4GQ14541 408 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 CDK10Q15131 360 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 PYHIN1Q6K0P9 492 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 C16orf87Q6PH81 154 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 FAM131AQ6UXB0 335 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 OVCH2Q7RTZ1 564 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 TGIF2LXQ8IUE1 241 aa7.82□□□□□ -1.16
CLK3-208ENST00000562626 OR8H3Q8N146 312 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms