RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 FAM106CPP0CH98 169 aa13.18□□□□□ -0.3
USB1-206ENST00000562534 OR3A3P47888 321 aa13.18□□□□□ -0.3
USB1-206ENST00000562534 RPL15P61313 204 aaKnown RBP13.18□□□□□ -0.3
USB1-206ENST00000562534 IL18Q14116 193 aa13.18□□□□□ -0.3
USB1-206ENST00000562534 PLA1AQ53H76 456 aa13.18□□□□□ -0.3
USB1-206ENST00000562534 TGIF2LXQ8IUE1 241 aa13.18□□□□□ -0.3
USB1-206ENST00000562534 ODF3L1Q8IXM7 274 aa13.18□□□□□ -0.3
USB1-206ENST00000562534 H1FOOQ8IZA3 346 aaPredicted RBP13.18□□□□□ -0.3
USB1-206ENST00000562534 RTN4IP1Q8WWV3 396 aaPredicted RBP13.18□□□□□ -0.3
USB1-206ENST00000562534 GCDHQ92947 438 aaPredicted RBP13.18□□□□□ -0.3
USB1-206ENST00000562534 CHIAQ9BZP6 476 aa13.18□□□□□ -0.3
USB1-206ENST00000562534 VPREB3Q9UKI3 123 aa13.18□□□□□ -0.3
USB1-206ENST00000562534 RBM7Q9Y580 266 aaKnown RBP13.18□□□□□ -0.3
USB1-206ENST00000562534 IGHV1-3A0A0C4DH29 117 aa13.17□□□□□ -0.3
USB1-206ENST00000562534 GABARAPH6UMI1 98 aa13.17□□□□□ -0.3
USB1-206ENST00000562534 CTDSPLO15194 276 aa13.17□□□□□ -0.3
USB1-206ENST00000562534 ST8SIA5O15466 376 aa13.17□□□□□ -0.3
USB1-206ENST00000562534 CRYBA1P05813 215 aa13.17□□□□□ -0.3
USB1-206ENST00000562534 OR8U9P0C7N5 309 aa13.17□□□□□ -0.3
USB1-206ENST00000562534 RCVRNP35243 200 aa13.17□□□□□ -0.3
USB1-206ENST00000562534 TAS2R46P59540 309 aa13.17□□□□□ -0.3
USB1-206ENST00000562534 DIAPH2-AS1Q14236 149 aa13.17□□□□□ -0.3
USB1-206ENST00000562534 CDK10Q15131 360 aa13.17□□□□□ -0.3
USB1-206ENST00000562534 FAM71F2Q6NXP2 309 aa13.17□□□□□ -0.3
USB1-206ENST00000562534 LIAT1Q6ZQX7 453 aa13.17□□□□□ -0.3
USB1-206ENST00000562534 MOB3BQ86TA1 216 aa13.17□□□□□ -0.3
USB1-206ENST00000562534 LYSMD2Q8IV50 215 aa13.17□□□□□ -0.3
USB1-206ENST00000562534 OR8U1Q8NH10 309 aa13.17□□□□□ -0.3
USB1-206ENST00000562534 TMEM158Q8WZ71 300 aa13.17□□□□□ -0.3
USB1-206ENST00000562534 SNAPC3Q92966 411 aa13.17□□□□□ -0.3
USB1-206ENST00000562534 SOSTQ9BQB4 213 aa13.17□□□□□ -0.3
USB1-206ENST00000562534 IFI27L2Q9H2X8 130 aa13.17□□□□□ -0.3
USB1-206ENST00000562534 RAB18Q9NP72 206 aa13.17□□□□□ -0.3
USB1-206ENST00000562534 RNF150Q9ULK6 438 aa13.17□□□□□ -0.3
USB1-206ENST00000562534 OR2W1Q9Y3N9 320 aa13.17□□□□□ -0.3
USB1-206ENST00000562534 FAM90A9PA6NNJ1 464 aa13.16□□□□□ -0.3
USB1-206ENST00000562534 TIMM23O14925 209 aa13.16□□□□□ -0.3
USB1-206ENST00000562534 SLC22A5O76082 557 aa13.16□□□□□ -0.3
USB1-206ENST00000562534 FCER2P06734 321 aa13.16□□□□□ -0.3
USB1-206ENST00000562534 OR5H8P0DN80 308 aa13.16□□□□□ -0.3
USB1-206ENST00000562534 PTBP1P26599 531 aaKnown RBP eCLIP13.16□□□□□ -0.3
USB1-206ENST00000562534 GPR12P47775 334 aa13.16□□□□□ -0.3
USB1-206ENST00000562534 REG1BP48304 166 aa13.16□□□□□ -0.3
USB1-206ENST00000562534 ACTBP60709 375 aa13.16□□□□□ -0.3
USB1-206ENST00000562534 ACTG1P63261 375 aa13.16□□□□□ -0.3
USB1-206ENST00000562534 SSBP1Q04837 148 aaKnown RBP13.16□□□□□ -0.3
USB1-206ENST00000562534 HABP2Q14520 560 aaPredicted RBP13.16□□□□□ -0.3
USB1-206ENST00000562534 KRTAP21-3Q3LHN1 58 aa13.16□□□□□ -0.3
USB1-206ENST00000562534 DHRS11Q6UWP2 260 aa13.16□□□□□ -0.3
USB1-206ENST00000562534 FAM131AQ6UXB0 335 aa13.16□□□□□ -0.3
USB1-206ENST00000562534 ZNF833PQ6ZTB9 187 aa13.16□□□□□ -0.3
USB1-206ENST00000562534 DRAM1Q8N682 238 aa13.16□□□□□ -0.3
USB1-206ENST00000562534 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.16□□□□□ -0.3
USB1-206ENST00000562534 OR52I2Q8NH67 350 aa13.16□□□□□ -0.3
USB1-206ENST00000562534 CAPSLQ8WWF8 208 aa13.16□□□□□ -0.3
USB1-206ENST00000562534 GIMAP1Q8WWP7 306 aa13.16□□□□□ -0.3
USB1-206ENST00000562534 ABHD14BQ96IU4 210 aa13.16□□□□□ -0.3
USB1-206ENST00000562534 PARP12Q9H0J9 701 aaKnown RBP13.16□□□□□ -0.3
USB1-206ENST00000562534 KLK11Q9UBX7 282 aa13.16□□□□□ -0.3
USB1-206ENST00000562534 MTFP1Q9UDX5 166 aa13.16□□□□□ -0.3
USB1-206ENST00000562534 TCF19Q9Y242 345 aa13.16□□□□□ -0.3
USB1-206ENST00000562534 SAA2-SAA4A0A096LPE2 208 aa13.15□□□□□ -0.3
USB1-206ENST00000562534 A0A1W2PPI3 338 aa13.15□□□□□ -0.3
USB1-206ENST00000562534 FAM181BA6NEQ2 426 aa13.15□□□□□ -0.3
USB1-206ENST00000562534 GPR137BO60478 399 aa13.15□□□□□ -0.3
USB1-206ENST00000562534 SAA2P0DJI9 122 aaPredicted RBP13.15□□□□□ -0.3
USB1-206ENST00000562534 NFYAP23511 347 aaPredicted RBP13.15□□□□□ -0.3
USB1-206ENST00000562534 CD1BP29016 333 aa13.15□□□□□ -0.3
USB1-206ENST00000562534 FCGR2CP31995 323 aa13.15□□□□□ -0.3
USB1-206ENST00000562534 LUMP51884 338 aaPredicted RBP13.15□□□□□ -0.3
USB1-206ENST00000562534 SRSF2Q01130 221 aaKnown RBP13.15□□□□□ -0.3
USB1-206ENST00000562534 LY6EQ16553 131 aa13.15□□□□□ -0.3
USB1-206ENST00000562534 OVCH2Q7RTZ1 564 aa13.15□□□□□ -0.3
USB1-206ENST00000562534 OR5H2Q8NGV7 314 aa13.15□□□□□ -0.3
USB1-206ENST00000562534 C2CD3Q4AC94 2353 aa13.15□□□□□ -0.3
USB1-206ENST00000562534 A6NDX4 124 aa13.14□□□□□ -0.31
USB1-206ENST00000562534 TUSC2O75896 110 aa13.14□□□□□ -0.31
USB1-206ENST00000562534 PMP2P02689 132 aa13.14□□□□□ -0.31
USB1-206ENST00000562534 HLA-DMAP28067 261 aa13.14□□□□□ -0.31
USB1-206ENST00000562534 RFX2P48378 723 aa13.14□□□□□ -0.31
USB1-206ENST00000562534 DYRK1AQ13627 763 aa13.14□□□□□ -0.31
USB1-206ENST00000562534 SPANXN2Q5MJ10 180 aa13.14□□□□□ -0.31
USB1-206ENST00000562534 CCDC190Q86UF4 302 aa13.14□□□□□ -0.31
USB1-206ENST00000562534 OR6Q1Q8NGQ2 317 aa13.14□□□□□ -0.31
USB1-206ENST00000562534 OR56B4Q8NH76 319 aa13.14□□□□□ -0.31
USB1-206ENST00000562534 CFHR4Q92496 578 aa13.14□□□□□ -0.31
USB1-206ENST00000562534 ZNF251Q9BRH9 671 aa13.14□□□□□ -0.31
USB1-206ENST00000562534 TAS2R8Q9NYW2 309 aa13.14□□□□□ -0.31
USB1-206ENST00000562534 ZNF107Q9UII5 783 aaPredicted RBP13.14□□□□□ -0.31
USB1-206ENST00000562534 ZNF736B4DX44 427 aaPredicted RBP13.13□□□□□ -0.31
USB1-206ENST00000562534 GSTZ1O43708 216 aaPredicted RBP13.13□□□□□ -0.31
USB1-206ENST00000562534 CD24P25063 80 aa13.13□□□□□ -0.31
USB1-206ENST00000562534 MC5RP33032 325 aa13.13□□□□□ -0.31
USB1-206ENST00000562534 ETV6P41212 452 aa13.13□□□□□ -0.31
USB1-206ENST00000562534 EBI3Q14213 229 aa13.13□□□□□ -0.31
USB1-206ENST00000562534 ACTBL2Q562R1 376 aa13.13□□□□□ -0.31
USB1-206ENST00000562534 CCBE1Q6UXH8 406 aaPredicted RBP13.13□□□□□ -0.31
USB1-206ENST00000562534 C16orf82Q7Z2V1 217 aa13.13□□□□□ -0.31
USB1-206ENST00000562534 OR6F1Q8NGZ6 308 aa13.13□□□□□ -0.31
USB1-206ENST00000562534 OR2T10Q8NGZ9 312 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms