RNA–Protein interactions for RNA: ENST00000562199.1

CAPN3-211, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 385 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-211ENST00000562199 BEST3Q8N1M1 668 aa4.62□□□□□ -1.67
CAPN3-211ENST00000562199 TMEM99Q8N816 258 aa4.62□□□□□ -1.67
CAPN3-211ENST00000562199 DCAF4L2Q8NA75 395 aa4.62□□□□□ -1.67
CAPN3-211ENST00000562199 THAP8Q8NA92 274 aa4.62□□□□□ -1.67
CAPN3-211ENST00000562199 C5orf17Q8NAS9 161 aa4.62□□□□□ -1.67
CAPN3-211ENST00000562199 PLPP5Q8NEB5 264 aa4.62□□□□□ -1.67
CAPN3-211ENST00000562199 CD99L2Q8TCZ2 262 aa4.62□□□□□ -1.67
CAPN3-211ENST00000562199 THEM6Q8WUY1 208 aa4.62□□□□□ -1.67
CAPN3-211ENST00000562199 BLNKQ8WV28 456 aa4.62□□□□□ -1.67
CAPN3-211ENST00000562199 APOBEC4Q8WW27 367 aaKnown RBP4.62□□□□□ -1.67
CAPN3-211ENST00000562199 MAL2Q969L2 176 aa4.62□□□□□ -1.67
CAPN3-211ENST00000562199 SARAFQ96BY9 339 aa4.62□□□□□ -1.67
CAPN3-211ENST00000562199 PPCDCQ96CD2 204 aa4.62□□□□□ -1.67
CAPN3-211ENST00000562199 WDYHV1Q96HA8 205 aa4.62□□□□□ -1.67
CAPN3-211ENST00000562199 ZNF681Q96N22 645 aa4.62□□□□□ -1.67
CAPN3-211ENST00000562199 GINS4Q9BRT9 223 aa4.62□□□□□ -1.67
CAPN3-211ENST00000562199 DPCDQ9BVM2 203 aaPredicted RBP4.62□□□□□ -1.67
CAPN3-211ENST00000562199 POLR2J2Q9GZM3 115 aaKnown RBP4.62□□□□□ -1.67
CAPN3-211ENST00000562199 OR2D2Q9H210 308 aa4.62□□□□□ -1.67
CAPN3-211ENST00000562199 VSIRQ9H7M9 311 aa4.62□□□□□ -1.67
CAPN3-211ENST00000562199 PELI2Q9HAT8 420 aa4.62□□□□□ -1.67
CAPN3-211ENST00000562199 NOX3Q9HBY0 568 aa4.62□□□□□ -1.67
CAPN3-211ENST00000562199 SH2D2AQ9NP31 389 aa4.62□□□□□ -1.67
CAPN3-211ENST00000562199 DNAJC27Q9NZQ0 273 aa4.62□□□□□ -1.67
CAPN3-211ENST00000562199 ZNF319Q9P2F9 582 aa4.62□□□□□ -1.67
CAPN3-211ENST00000562199 NSG2Q9Y328 171 aa4.62□□□□□ -1.67
CAPN3-211ENST00000562199 KIAA1671Q9BY89 1806 aa4.62□□□□□ -1.67
CAPN3-211ENST00000562199 A0A0A0MQY5 61 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 GAGE12BA1L429 117 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 C7orf66A4D0T2 115 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 GAGE12HA6NDE8 117 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 ZNF207O43670 478 aaKnown RBP4.61□□□□□ -1.67
CAPN3-211ENST00000562199 AIFM1O95831 613 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 CLDN1O95832 211 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 ZNF20P17024 532 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 SRD5A1P18405 259 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 CD52P31358 61 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 G6PCP35575 357 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 SSR4P51571 173 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 DLX1P56177 255 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 RPS24P62847 133 aaKnown RBP4.61□□□□□ -1.67
CAPN3-211ENST00000562199 DGCR2P98153 550 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 MEF2CQ06413 473 aaPredicted RBP4.61□□□□□ -1.67
CAPN3-211ENST00000562199 UNC119Q13432 240 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 GGTLC2Q14390 218 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 IQCJQ1A5X6 159 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 PLK5Q496M5 336 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 KHDC3LQ587J8 217 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 AWAT1Q58HT5 328 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 ZNF542PQ5EBM4 170 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 CD276Q5ZPR3 534 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 CNIH2Q6PI25 160 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 GLIPR1L1Q6UWM5 242 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 ZNF705AQ6ZN79 300 aaPredicted RBP4.61□□□□□ -1.67
CAPN3-211ENST00000562199 Q71RC1 249 aaPredicted RBP4.61□□□□□ -1.67
CAPN3-211ENST00000562199 BCDIN3DQ7Z5W3 292 aaKnown RBP4.61□□□□□ -1.67
CAPN3-211ENST00000562199 GKN2Q86XP6 184 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 VKORC1L1Q8N0U8 176 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 BCL6BQ8N143 479 aaPredicted RBP4.61□□□□□ -1.67
CAPN3-211ENST00000562199 GBGT1Q8N5D6 347 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 PRR26Q8N8Z3 221 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 OR51A2Q8NGJ7 313 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 OR10G7Q8NGN6 311 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 SLC37A2Q8TED4 501 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 C2orf15Q8WU43 125 aaKnown RBP4.61□□□□□ -1.67
CAPN3-211ENST00000562199 MBD3L1Q8WWY6 194 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 PP6455Q8WZ26 134 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 LYSMD1Q96S90 227 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 TBX15Q96SF7 602 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 FAM173AQ9BQD7 235 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 NIPSNAP3BQ9BS92 247 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 C1QTNF6Q9BXI9 259 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 NPFFR1Q9GZQ6 430 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 IFI27L2Q9H2X8 130 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 FBXL15Q9H469 300 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 HES4Q9HCC6 221 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 GALNT9Q9HCQ5 603 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 MMP26Q9NRE1 261 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 OR5AC2Q9NZP5 309 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 NTNG1Q9Y2I2 539 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.61□□□□□ -1.67
CAPN3-211ENST00000562199 SIRT4Q9Y6E7 314 aaPredicted RBP4.61□□□□□ -1.67
CAPN3-211ENST00000562199 ALPK3Q96L96 1907 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 POLR2AP24928 1970 aaKnown RBP4.61□□□□□ -1.67
CAPN3-211ENST00000562199 MICAL3Q7RTP6 2002 aa4.61□□□□□ -1.67
CAPN3-211ENST00000562199 PLXNB3Q9ULL4 1909 aa4.6□□□□□ -1.67
CAPN3-211ENST00000562199 TRIP12Q14669 1992 aaPredicted RBP4.6□□□□□ -1.67
CAPN3-211ENST00000562199 SCN10AQ9Y5Y9 1956 aa4.6□□□□□ -1.67
CAPN3-211ENST00000562199 CCL15-CCL14A0A0B4J2E2 113 aa4.6□□□□□ -1.67
CAPN3-211ENST00000562199 TRDV1A0A1B0GX56 115 aa4.6□□□□□ -1.67
CAPN3-211ENST00000562199 TMEM202A6NGA9 273 aa4.6□□□□□ -1.67
CAPN3-211ENST00000562199 C9JAW5 83 aa4.6□□□□□ -1.67
CAPN3-211ENST00000562199 FAM157AC9JC47 383 aa4.6□□□□□ -1.67
CAPN3-211ENST00000562199 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.6□□□□□ -1.67
CAPN3-211ENST00000562199 J3QR89 54 aa4.6□□□□□ -1.67
CAPN3-211ENST00000562199 HSPB6O14558 160 aa4.6□□□□□ -1.67
CAPN3-211ENST00000562199 SH2D1BO14796 132 aa4.6□□□□□ -1.67
CAPN3-211ENST00000562199 MPPED1O15442 326 aa4.6□□□□□ -1.67
CAPN3-211ENST00000562199 C1QL1O75973 258 aa4.6□□□□□ -1.67
CAPN3-211ENST00000562199 YIF1AO95070 293 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms