RNA–Protein interactions for RNA: ENST00000561400.1

HERC1-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-214ENST00000561400 VPS13CQ709C8 3753 aa9.8□□□□□ -0.84
HERC1-214ENST00000561400 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.8□□□□□ -0.84
HERC1-214ENST00000561400 ANKRD20A5PA0PJZ0 165 aa9.8□□□□□ -0.84
HERC1-214ENST00000561400 ADAP1O75689 374 aa9.8□□□□□ -0.84
HERC1-214ENST00000561400 GRPP07492 148 aa9.8□□□□□ -0.84
HERC1-214ENST00000561400 SCGB1A1P11684 91 aa9.8□□□□□ -0.84
HERC1-214ENST00000561400 FABP4P15090 132 aa9.8□□□□□ -0.84
HERC1-214ENST00000561400 TNFSF4P23510 183 aa9.8□□□□□ -0.84
HERC1-214ENST00000561400 RAB7AP51149 207 aa9.8□□□□□ -0.84
HERC1-214ENST00000561400 FUT6P51993 359 aa9.8□□□□□ -0.84
HERC1-214ENST00000561400 GNG3P63215 75 aa9.8□□□□□ -0.84
HERC1-214ENST00000561400 CNIH2Q6PI25 160 aa9.8□□□□□ -0.84
HERC1-214ENST00000561400 SPICQ8N5J4 248 aa9.8□□□□□ -0.84
HERC1-214ENST00000561400 SPSB1Q96BD6 273 aa9.8□□□□□ -0.84
HERC1-214ENST00000561400 TECTBQ96PL2 329 aa9.8□□□□□ -0.84
HERC1-214ENST00000561400 TP53RKQ96S44 253 aa9.8□□□□□ -0.84
HERC1-214ENST00000561400 RAB1BQ9H0U4 201 aa9.8□□□□□ -0.84
HERC1-214ENST00000561400 GSTK1Q9Y2Q3 226 aa9.8□□□□□ -0.84
HERC1-214ENST00000561400 OR5B21A6NL26 309 aa9.79□□□□□ -0.84
HERC1-214ENST00000561400 MGMTP16455 207 aa9.79□□□□□ -0.84
HERC1-214ENST00000561400 PDLIM4P50479 330 aa9.79□□□□□ -0.84
HERC1-214ENST00000561400 IL18Q14116 193 aa9.79□□□□□ -0.84
HERC1-214ENST00000561400 CALHM1Q8IU99 346 aa9.79□□□□□ -0.84
HERC1-214ENST00000561400 C11orf53Q8IXP5 236 aa9.79□□□□□ -0.84
HERC1-214ENST00000561400 PHYHIPLQ96FC7 376 aa9.79□□□□□ -0.84
HERC1-214ENST00000561400 BORCS8Q96FH0 119 aa9.79□□□□□ -0.84
HERC1-214ENST00000561400 GFI1Q99684 422 aa9.79□□□□□ -0.84
HERC1-214ENST00000561400 HINT2Q9BX68 163 aa9.79□□□□□ -0.84
HERC1-214ENST00000561400 OR51I2Q9H344 312 aa9.79□□□□□ -0.84
HERC1-214ENST00000561400 SAP30LQ9HAJ7 183 aa9.79□□□□□ -0.84
HERC1-214ENST00000561400 ZNF701Q9NV72 531 aaPredicted RBP9.79□□□□□ -0.84
HERC1-214ENST00000561400 OR2A4O95047 310 aa9.79□□□□□ -0.84
HERC1-214ENST00000561400 MTCP1P56278 107 aa9.79□□□□□ -0.84
HERC1-214ENST00000561400 KISS1Q15726 138 aa9.79□□□□□ -0.84
HERC1-214ENST00000561400 TAF9Q16594 264 aa9.79□□□□□ -0.84
HERC1-214ENST00000561400 ZNF826PQ6ZT77 177 aa9.79□□□□□ -0.84
HERC1-214ENST00000561400 TMEM144Q7Z5S9 345 aa9.79□□□□□ -0.84
HERC1-214ENST00000561400 LYPD6Q86Y78 171 aa9.79□□□□□ -0.84
HERC1-214ENST00000561400 RPUSD4Q96CM3 377 aaKnown RBP9.79□□□□□ -0.84
HERC1-214ENST00000561400 KCTD7Q96MP8 289 aa9.79□□□□□ -0.84
HERC1-214ENST00000561400 OR2A7Q96R45 310 aa9.79□□□□□ -0.84
HERC1-214ENST00000561400 CITED1Q99966 193 aa9.79□□□□□ -0.84
HERC1-214ENST00000561400 GCM1Q9NP62 436 aa9.79□□□□□ -0.84
HERC1-214ENST00000561400 TMED3Q9Y3Q3 217 aa9.79□□□□□ -0.84
HERC1-214ENST00000561400 TRAV1-2A0A0B4J238 106 aa9.78□□□□□ -0.84
HERC1-214ENST00000561400 LYNX1G3V0Z9 82 aa9.78□□□□□ -0.84
HERC1-214ENST00000561400 TOMM40O96008 361 aa9.78□□□□□ -0.84
HERC1-214ENST00000561400 LYNX1P0DP58 116 aa9.78□□□□□ -0.84
HERC1-214ENST00000561400 GNRHRP30968 328 aa9.78□□□□□ -0.84
HERC1-214ENST00000561400 GATA4P43694 442 aa9.78□□□□□ -0.84
HERC1-214ENST00000561400 RPS20P60866 119 aaKnown RBP9.78□□□□□ -0.84
HERC1-214ENST00000561400 TESK1Q15569 626 aa9.78□□□□□ -0.84
HERC1-214ENST00000561400 OR10K2Q6IF99 312 aa9.78□□□□□ -0.84
HERC1-214ENST00000561400 MOGAT3Q86VF5 341 aa9.78□□□□□ -0.84
HERC1-214ENST00000561400 NR2C2APQ86WQ0 139 aa9.78□□□□□ -0.84
HERC1-214ENST00000561400 BOLLQ8N9W6 283 aaKnown RBP9.78□□□□□ -0.84
HERC1-214ENST00000561400 SCCPDHQ8NBX0 429 aa9.78□□□□□ -0.84
HERC1-214ENST00000561400 NEU4Q8WWR8 484 aaPredicted RBP9.78□□□□□ -0.84
HERC1-214ENST00000561400 GALNT14Q96FL9 552 aa9.78□□□□□ -0.84
HERC1-214ENST00000561400 NRIP2Q9BQI9 281 aa9.78□□□□□ -0.84
HERC1-214ENST00000561400 CHIAQ9BZP6 476 aa9.78□□□□□ -0.84
HERC1-214ENST00000561400 SELENOIQ9C0D9 397 aa9.78□□□□□ -0.84
HERC1-214ENST00000561400 AK6Q9Y3D8 172 aaKnown RBP9.78□□□□□ -0.84
HERC1-214ENST00000561400 SETXQ7Z333 2677 aaKnown RBP9.78□□□□□ -0.84
HERC1-214ENST00000561400 SMIM30A4D0T7 59 aa9.78□□□□□ -0.84
HERC1-214ENST00000561400 LRP5LA4QPB2 252 aa9.78□□□□□ -0.84
HERC1-214ENST00000561400 CDIPTO14735 213 aa9.78□□□□□ -0.84
HERC1-214ENST00000561400 CDRT1O95170 752 aa9.78□□□□□ -0.84
HERC1-214ENST00000561400 IGHV4-39P01824 125 aa9.78□□□□□ -0.84
HERC1-214ENST00000561400 TNFRSF1AP19438 455 aa9.78□□□□□ -0.84
HERC1-214ENST00000561400 COL8A2P25067 703 aa9.78□□□□□ -0.84
HERC1-214ENST00000561400 ATP1B3P54709 279 aa9.78□□□□□ -0.84
HERC1-214ENST00000561400 HOXA4Q00056 320 aaPredicted RBP9.78□□□□□ -0.84
HERC1-214ENST00000561400 MZT1Q08AG7 82 aa9.78□□□□□ -0.84
HERC1-214ENST00000561400 OR10R2Q8NGX6 335 aa9.78□□□□□ -0.84
HERC1-214ENST00000561400 ARL11Q969Q4 196 aa9.78□□□□□ -0.84
HERC1-214ENST00000561400 CITED2Q99967 270 aaPredicted RBP9.78□□□□□ -0.84
HERC1-214ENST00000561400 ARV1Q9H2C2 271 aa9.78□□□□□ -0.84
HERC1-214ENST00000561400 ZNF230Q9UIE0 474 aaPredicted RBP9.78□□□□□ -0.84
HERC1-214ENST00000561400 PPP1R3CQ9UQK1 317 aa9.78□□□□□ -0.84
HERC1-214ENST00000561400 TNFRSF18Q9Y5U5 241 aa9.78□□□□□ -0.84
HERC1-214ENST00000561400 IGHV1-69-2A0A0G2JMI3 117 aa9.77□□□□□ -0.85
HERC1-214ENST00000561400 KIR2DL5BA0A0G2JN68 375 aa9.77□□□□□ -0.85
HERC1-214ENST00000561400 KIR2DL5BA0A0G2JPC4 375 aa9.77□□□□□ -0.85
HERC1-214ENST00000561400 C3orf80F5H4A9 247 aa9.77□□□□□ -0.85
HERC1-214ENST00000561400 GCGP01275 180 aa9.77□□□□□ -0.85
HERC1-214ENST00000561400 ZNF93P35789 620 aaPredicted RBP9.77□□□□□ -0.85
HERC1-214ENST00000561400 PTH2RP49190 550 aa9.77□□□□□ -0.85
HERC1-214ENST00000561400 MTNR1BP49286 362 aa9.77□□□□□ -0.85
HERC1-214ENST00000561400 EFNA4P52798 201 aa9.77□□□□□ -0.85
HERC1-214ENST00000561400 OR10A3P58181 314 aa9.77□□□□□ -0.85
HERC1-214ENST00000561400 DLK1P80370 383 aa9.77□□□□□ -0.85
HERC1-214ENST00000561400 SRSF3P84103 164 aaKnown RBP9.77□□□□□ -0.85
HERC1-214ENST00000561400 TRAT1Q6PIZ9 186 aa9.77□□□□□ -0.85
HERC1-214ENST00000561400 OR2W3Q7Z3T1 314 aa9.77□□□□□ -0.85
HERC1-214ENST00000561400 KIR2DL5AQ8N109 375 aa9.77□□□□□ -0.85
HERC1-214ENST00000561400 AQP3Q92482 292 aa9.77□□□□□ -0.85
HERC1-214ENST00000561400 FAM110AQ9BQ89 295 aa9.77□□□□□ -0.85
HERC1-214ENST00000561400 PLEKHA2Q9HB19 425 aa9.77□□□□□ -0.85
HERC1-214ENST00000561400 RHOFQ9HBH0 211 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms