RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 ZC4H2Q9NQZ6 224 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 DIABLOQ9NR28 239 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 FGFR1OP2Q9NVK5 253 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 FAM206AQ9NX38 181 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 TECRQ9NZ01 308 aaKnown RBP3.89□□□□□ -1.79
HERC1-213ENST00000561359 FAM30AQ9NZY2 134 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 RSL24D1Q9UHA3 163 aaKnown RBP3.89□□□□□ -1.79
HERC1-213ENST00000561359 KIF25Q9UIL4 384 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 GTF2A1LQ9UNN4 478 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 DHDHQ9UQ10 334 aa3.89□□□□□ -1.79
HERC1-213ENST00000561359 TRAV39A0A0B4J263 110 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 KIR2DL5BA0A0G2JN68 375 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 KIR2DL5BA0A0G2JPC4 375 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 NPIPB11E5RHQ5 1161 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 LGALS9O00182 355 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 SLC33A1O00400 549 aaPredicted RBP3.88□□□□□ -1.79
HERC1-213ENST00000561359 CASQ2O14958 399 aaPredicted RBP3.88□□□□□ -1.79
HERC1-213ENST00000561359 DEGS1O15121 323 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 SULT1B1O43704 296 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 SELENOFO60613 162 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 DIRAS1O95057 198 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 FOLR2P14207 255 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 RPL35AP18077 110 aaKnown RBP3.88□□□□□ -1.79
HERC1-213ENST00000561359 PRDX6P30041 224 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 FUT6P51993 359 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 ELLP55199 621 aaPredicted RBP3.88□□□□□ -1.79
HERC1-213ENST00000561359 S100A12P80511 92 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 IFITM2Q01629 132 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 AKIRIN2Q53H80 203 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 LINC01590Q5TEZ4 76 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 CGB2Q6NT52 195 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 GPR141Q7Z602 305 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 TMEM179BQ7Z7N9 219 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 LINC00596Q86U02 117 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 UBE2DNLQ8IWF7 75 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 KIR2DL5AQ8N109 375 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 LINC00311Q8N616 119 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 POC5Q8NA72 575 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 CHST4Q8NCG5 386 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 OR10A7Q8NGE5 316 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 OR8J3Q8NGG0 315 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 KIR2DL5BQ8NHK3 375 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 FRZBQ92765 325 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 SNAPC3Q92966 411 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 TRIM63Q969Q1 353 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 BORCS8Q96FH0 119 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 RITA1Q96K30 269 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 EBF4Q9BQW3 602 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 RNF126Q9BV68 326 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 MROQ9BYG7 248 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 NMNAT2Q9BZQ4 307 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 C11orf68Q9H3H3 251 aaKnown RBP3.88□□□□□ -1.79
HERC1-213ENST00000561359 FBXL15Q9H469 300 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 Q9H521 79 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 LINC00574Q9H8X3 128 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 MED20Q9H944 212 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 HMG20AQ9NP66 347 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 C8orf4Q9NR00 106 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 MRGBPQ9NV56 204 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 FAM118AQ9NWS6 357 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 CDH10Q9Y6N8 788 aa3.88□□□□□ -1.79
HERC1-213ENST00000561359 IGHV3-43A0A0B4J1X8 118 aa3.87□□□□□ -1.79
HERC1-213ENST00000561359 TRAV10A0A0B4J240 114 aa3.87□□□□□ -1.79
HERC1-213ENST00000561359 CCDC160A6NGH7 325 aa3.87□□□□□ -1.79
HERC1-213ENST00000561359 RIIAD1A6NNX1 92 aa3.87□□□□□ -1.79
HERC1-213ENST00000561359 FAM220BPB1ANY3 271 aa3.87□□□□□ -1.79
HERC1-213ENST00000561359 LOC110117498-PIK3R3F6TDL0 507 aa3.87□□□□□ -1.79
HERC1-213ENST00000561359 SDCBPO00560 298 aaPredicted RBP3.87□□□□□ -1.79
HERC1-213ENST00000561359 GATBO75879 557 aaKnown RBP3.87□□□□□ -1.79
HERC1-213ENST00000561359 IFNA21P01568 189 aa3.87□□□□□ -1.79
HERC1-213ENST00000561359 IFNA17P01571 189 aa3.87□□□□□ -1.79
HERC1-213ENST00000561359 IFNGP01579 166 aa3.87□□□□□ -1.79
HERC1-213ENST00000561359 IGLV3-1P01715 115 aa3.87□□□□□ -1.79
HERC1-213ENST00000561359 TTRP02766 147 aa3.87□□□□□ -1.79
HERC1-213ENST00000561359 IGHV3-43DP0DP04 118 aa3.87□□□□□ -1.79
HERC1-213ENST00000561359 ZNF3P17036 446 aa3.87□□□□□ -1.79
HERC1-213ENST00000561359 AADACP22760 399 aa3.87□□□□□ -1.79
HERC1-213ENST00000561359 FCGR2BP31994 310 aaPredicted RBP3.87□□□□□ -1.79
HERC1-213ENST00000561359 IFNGR2P38484 337 aa3.87□□□□□ -1.79
HERC1-213ENST00000561359 AP2S1P53680 142 aaPredicted RBP3.87□□□□□ -1.79
HERC1-213ENST00000561359 ATP1B3P54709 279 aa3.87□□□□□ -1.79
HERC1-213ENST00000561359 DEFA5Q01523 94 aa3.87□□□□□ -1.79
HERC1-213ENST00000561359 TSPAN31Q12999 210 aa3.87□□□□□ -1.79
HERC1-213ENST00000561359 OXA1LQ15070 435 aa3.87□□□□□ -1.79
HERC1-213ENST00000561359 MED22Q15528 200 aa3.87□□□□□ -1.79
HERC1-213ENST00000561359 UBE2V2Q15819 145 aa3.87□□□□□ -1.79
HERC1-213ENST00000561359 KCTD21Q4G0X4 260 aa3.87□□□□□ -1.79
HERC1-213ENST00000561359 CCDC58Q4VC31 144 aa3.87□□□□□ -1.79
HERC1-213ENST00000561359 PAN3Q58A45 887 aaKnown RBP3.87□□□□□ -1.79
HERC1-213ENST00000561359 SAMD4BQ5PRF9 694 aaKnown RBP3.87□□□□□ -1.79
HERC1-213ENST00000561359 ZNF57Q68EA5 555 aaPredicted RBP3.87□□□□□ -1.79
HERC1-213ENST00000561359 RPL13AP3Q6NVV1 102 aa3.87□□□□□ -1.79
HERC1-213ENST00000561359 ZNF600Q6ZNG1 722 aa3.87□□□□□ -1.79
HERC1-213ENST00000561359 LINC00299Q6ZSB3 139 aa3.87□□□□□ -1.79
HERC1-213ENST00000561359 SLC25A48Q6ZT89 311 aaKnown RBP3.87□□□□□ -1.79
HERC1-213ENST00000561359 KCTD20Q7Z5Y7 419 aa3.87□□□□□ -1.79
HERC1-213ENST00000561359 SPATA12Q7Z6I5 190 aa3.87□□□□□ -1.79
HERC1-213ENST00000561359 ARPINQ7Z6K5 226 aa3.87□□□□□ -1.79
HERC1-213ENST00000561359 CCDC28AQ8IWP9 274 aa3.87□□□□□ -1.79
HERC1-213ENST00000561359 TMEM61Q8N0U2 210 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms