RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 S100A11P31949 105 aa14.14□□□□□ -0.15
HDDC3-206ENST00000561036 OPCMLQ14982 345 aa14.14□□□□□ -0.15
HDDC3-206ENST00000561036 TMEM155Q4W5P6 130 aa14.14□□□□□ -0.15
HDDC3-206ENST00000561036 ACOT7LQ6ZUV0 252 aa14.14□□□□□ -0.15
HDDC3-206ENST00000561036 TMUB2Q71RG4 321 aa14.14□□□□□ -0.15
HDDC3-206ENST00000561036 INO80EQ8NBZ0 244 aaPredicted RBP14.14□□□□□ -0.15
HDDC3-206ENST00000561036 ZNF436-AS1Q8NC38 126 aaPredicted RBP14.14□□□□□ -0.15
HDDC3-206ENST00000561036 CLEC18CQ8NCF0 446 aa14.14□□□□□ -0.15
HDDC3-206ENST00000561036 LSM10Q969L4 123 aaKnown RBP14.14□□□□□ -0.15
HDDC3-206ENST00000561036 RAB39BQ96DA2 213 aa14.14□□□□□ -0.15
HDDC3-206ENST00000561036 ABHD14BQ96IU4 210 aa14.14□□□□□ -0.15
HDDC3-206ENST00000561036 UBTD1Q9HAC8 227 aa14.14□□□□□ -0.15
HDDC3-206ENST00000561036 C19orf12Q9NSK7 152 aa14.14□□□□□ -0.15
HDDC3-206ENST00000561036 MBD2Q9UBB5 411 aa14.14□□□□□ -0.15
HDDC3-206ENST00000561036 CTSZQ9UBR2 303 aa14.14□□□□□ -0.15
HDDC3-206ENST00000561036 MEX3AA1L020 520 aaKnown RBP14.13□□□□□ -0.15
HDDC3-206ENST00000561036 LYNX1G3V0Z9 82 aa14.13□□□□□ -0.15
HDDC3-206ENST00000561036 ST8SIA5O15466 376 aa14.13□□□□□ -0.15
HDDC3-206ENST00000561036 FCN3O75636 299 aa14.13□□□□□ -0.15
HDDC3-206ENST00000561036 RLN2P04090 185 aa14.13□□□□□ -0.15
HDDC3-206ENST00000561036 LYNX1P0DP58 116 aa14.13□□□□□ -0.15
HDDC3-206ENST00000561036 GPR12P47775 334 aa14.13□□□□□ -0.15
HDDC3-206ENST00000561036 TMEM33P57088 247 aa14.13□□□□□ -0.15
HDDC3-206ENST00000561036 RAB32Q13637 225 aa14.13□□□□□ -0.15
HDDC3-206ENST00000561036 SMCO1Q147U7 214 aa14.13□□□□□ -0.15
HDDC3-206ENST00000561036 LTC4SQ16873 150 aa14.13□□□□□ -0.15
HDDC3-206ENST00000561036 NMSQ5H8A3 153 aa14.13□□□□□ -0.15
HDDC3-206ENST00000561036 TMEM200BQ69YZ2 307 aa14.13□□□□□ -0.15
HDDC3-206ENST00000561036 FAM53AQ6NSI3 398 aaPredicted RBP14.13□□□□□ -0.15
HDDC3-206ENST00000561036 HEPN1Q6WQI6 88 aa14.13□□□□□ -0.15
HDDC3-206ENST00000561036 ZNF767PQ75MW2 155 aa14.13□□□□□ -0.15
HDDC3-206ENST00000561036 KCNRGQ8N5I3 272 aa14.13□□□□□ -0.15
HDDC3-206ENST00000561036 ZNF714Q96N38 554 aa14.13□□□□□ -0.15
HDDC3-206ENST00000561036 GPHA2Q96T91 129 aa14.13□□□□□ -0.15
HDDC3-206ENST00000561036 HEXA-AS1Q9H8Q6 139 aa14.13□□□□□ -0.15
HDDC3-206ENST00000561036 SDHAF2Q9NX18 166 aa14.13□□□□□ -0.15
HDDC3-206ENST00000561036 MIOXQ9UGB7 285 aa14.13□□□□□ -0.15
HDDC3-206ENST00000561036 RPUSD1Q9UJJ7 312 aaKnown RBP14.13□□□□□ -0.15
HDDC3-206ENST00000561036 LAMP3Q9UQV4 416 aa14.13□□□□□ -0.15
HDDC3-206ENST00000561036 IGSF10Q6WRI0 2623 aa14.13□□□□□ -0.15
HDDC3-206ENST00000561036 PKDREJQ9NTG1 2253 aa14.12□□□□□ -0.15
HDDC3-206ENST00000561036 DSCAML1Q8TD84 2053 aa14.12□□□□□ -0.15
HDDC3-206ENST00000561036 H0YIZ8 118 aa14.12□□□□□ -0.15
HDDC3-206ENST00000561036 SSTR2P30874 369 aa14.12□□□□□ -0.15
HDDC3-206ENST00000561036 NUP62P37198 522 aaPredicted RBP14.12□□□□□ -0.15
HDDC3-206ENST00000561036 TLE4Q04727 773 aa14.12□□□□□ -0.15
HDDC3-206ENST00000561036 FGFRL1Q8N441 504 aa14.12□□□□□ -0.15
HDDC3-206ENST00000561036 H1FXQ92522 213 aaKnown RBP14.12□□□□□ -0.15
HDDC3-206ENST00000561036 C5orf30Q96GV9 206 aa14.12□□□□□ -0.15
HDDC3-206ENST00000561036 ABHD14AQ9BUJ0 271 aa14.12□□□□□ -0.15
HDDC3-206ENST00000561036 CHODLQ9H9P2 273 aa14.12□□□□□ -0.15
HDDC3-206ENST00000561036 RALYQ9UKM9 306 aaKnown RBP14.12□□□□□ -0.15
HDDC3-206ENST00000561036 A0A1B0GU03 582 aa14.11□□□□□ -0.15
HDDC3-206ENST00000561036 ATG12O94817 140 aa14.11□□□□□ -0.15
HDDC3-206ENST00000561036 CLDN1O95832 211 aa14.11□□□□□ -0.15
HDDC3-206ENST00000561036 F12P00748 615 aaPredicted RBP14.11□□□□□ -0.15
HDDC3-206ENST00000561036 OMGP23515 440 aa14.11□□□□□ -0.15
HDDC3-206ENST00000561036 ZNF273Q14593 569 aa14.11□□□□□ -0.15
HDDC3-206ENST00000561036 ZNF585BQ52M93 769 aa14.11□□□□□ -0.15
HDDC3-206ENST00000561036 THOC7Q6I9Y2 204 aaKnown RBP14.11□□□□□ -0.15
HDDC3-206ENST00000561036 ZNF439Q8NDP4 499 aa14.11□□□□□ -0.15
HDDC3-206ENST00000561036 OR4D5Q8NGN0 318 aa14.11□□□□□ -0.15
HDDC3-206ENST00000561036 CD300LFQ8TDQ1 290 aa14.11□□□□□ -0.15
HDDC3-206ENST00000561036 DCUN1D4Q92564 292 aa14.11□□□□□ -0.15
HDDC3-206ENST00000561036 ARL6Q9H0F7 186 aa14.11□□□□□ -0.15
HDDC3-206ENST00000561036 IFI27L2Q9H2X8 130 aa14.11□□□□□ -0.15
HDDC3-206ENST00000561036 RNF222A6NCQ9 220 aa14.1□□□□□ -0.15
HDDC3-206ENST00000561036 ST8SIA3O43173 380 aa14.1□□□□□ -0.15
HDDC3-206ENST00000561036 TSC22D2O75157 780 aa14.1□□□□□ -0.15
HDDC3-206ENST00000561036 DEDDO75618 318 aa14.1□□□□□ -0.15
HDDC3-206ENST00000561036 ZNF16P17020 682 aaPredicted RBP14.1□□□□□ -0.15
HDDC3-206ENST00000561036 EFNA4P52798 201 aa14.1□□□□□ -0.15
HDDC3-206ENST00000561036 S100A10P60903 97 aa14.1□□□□□ -0.15
HDDC3-206ENST00000561036 CT45A1Q5HYN5 189 aa14.1□□□□□ -0.15
HDDC3-206ENST00000561036 PRAMEF5Q5TYX0 476 aa14.1□□□□□ -0.15
HDDC3-206ENST00000561036 ZNF841Q6ZN19 808 aa14.1□□□□□ -0.15
HDDC3-206ENST00000561036 C8orf31Q8N9H6 132 aa14.1□□□□□ -0.15
HDDC3-206ENST00000561036 OR1S1Q8NH92 325 aa14.1□□□□□ -0.15
HDDC3-206ENST00000561036 CT45A3Q8NHU0 189 aa14.1□□□□□ -0.15
HDDC3-206ENST00000561036 TCTEX1D2Q8WW35 142 aa14.1□□□□□ -0.15
HDDC3-206ENST00000561036 NEIL1Q96FI4 390 aaPredicted RBP14.1□□□□□ -0.15
HDDC3-206ENST00000561036 ADGRG4Q8IZF6 3080 aa14.1□□□□□ -0.15
HDDC3-206ENST00000561036 A0A1W2PPH5 198 aa14.09□□□□□ -0.15
HDDC3-206ENST00000561036 RAB29O14966 203 aa14.09□□□□□ -0.15
HDDC3-206ENST00000561036 PPIHO43447 177 aaKnown RBP14.09□□□□□ -0.15
HDDC3-206ENST00000561036 IGKV1-39P01597 117 aa14.09□□□□□ -0.15
HDDC3-206ENST00000561036 MBPP02686 304 aaPredicted RBP14.09□□□□□ -0.15
HDDC3-206ENST00000561036 IGKV1D-39P04432 117 aa14.09□□□□□ -0.15
HDDC3-206ENST00000561036 NFYBP25208 207 aa14.09□□□□□ -0.15
HDDC3-206ENST00000561036 KIR2DS2P43631 304 aa14.09□□□□□ -0.15
HDDC3-206ENST00000561036 LPAR6P43657 344 aa14.09□□□□□ -0.15
HDDC3-206ENST00000561036 ZNF134P52741 427 aa14.09□□□□□ -0.15
HDDC3-206ENST00000561036 DLX6P56179 175 aa14.09□□□□□ -0.15
HDDC3-206ENST00000561036 RPL30P62888 115 aaKnown RBP14.09□□□□□ -0.15
HDDC3-206ENST00000561036 TEX261Q6UWH6 196 aa14.09□□□□□ -0.15
HDDC3-206ENST00000561036 SLC25A48Q6ZT89 311 aaKnown RBP14.09□□□□□ -0.15
HDDC3-206ENST00000561036 FAM219AQ8IW50 185 aa14.09□□□□□ -0.15
HDDC3-206ENST00000561036 OR8B3Q8NGG8 313 aa14.09□□□□□ -0.15
HDDC3-206ENST00000561036 AQP10Q96PS8 301 aa14.09□□□□□ -0.15
HDDC3-206ENST00000561036 OR8B2Q96RD0 313 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms