RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 MED22Q15528 200 aa12.62□□□□□ -0.39
SNX1-213ENST00000561026 MINDY2Q8NBR6 621 aa12.62□□□□□ -0.39
SNX1-213ENST00000561026 OR1N2Q8NGR9 330 aa12.62□□□□□ -0.39
SNX1-213ENST00000561026 GNB4Q9HAV0 340 aa12.62□□□□□ -0.39
SNX1-213ENST00000561026 CHMP1AQ9HD42 196 aaPredicted RBP12.62□□□□□ -0.39
SNX1-213ENST00000561026 KIAA1456Q9P272 454 aa12.62□□□□□ -0.39
SNX1-213ENST00000561026 SLC23A1Q9UHI7 598 aa12.62□□□□□ -0.39
SNX1-213ENST00000561026 VSIG4Q9Y279 399 aa12.62□□□□□ -0.39
SNX1-213ENST00000561026 A0A0A6YYD4 124 aa12.61□□□□□ -0.39
SNX1-213ENST00000561026 BPNT1O95861 308 aa12.61□□□□□ -0.39
SNX1-213ENST00000561026 ECI1P42126 302 aa12.61□□□□□ -0.39
SNX1-213ENST00000561026 RAB9AP51151 201 aa12.61□□□□□ -0.39
SNX1-213ENST00000561026 IRF3Q14653 427 aa12.61□□□□□ -0.39
SNX1-213ENST00000561026 ZNF260Q3ZCT1 412 aa12.61□□□□□ -0.39
SNX1-213ENST00000561026 OR6M1Q8NGM8 313 aa12.61□□□□□ -0.39
SNX1-213ENST00000561026 TMEM203Q969S6 136 aa12.61□□□□□ -0.39
SNX1-213ENST00000561026 WWC2-AS2Q96NR7 200 aa12.61□□□□□ -0.39
SNX1-213ENST00000561026 PRR25Q96S07 402 aa12.61□□□□□ -0.39
SNX1-213ENST00000561026 RIMS4Q9H426 269 aaPredicted RBP12.61□□□□□ -0.39
SNX1-213ENST00000561026 SCN3BQ9NY72 215 aa12.61□□□□□ -0.39
SNX1-213ENST00000561026 TRBV6-6A0A0A6YYG2 114 aa12.6□□□□□ -0.39
SNX1-213ENST00000561026 OR8U8P0C7N1 319 aa12.6□□□□□ -0.39
SNX1-213ENST00000561026 NHLRC4P0CG21 123 aaPredicted RBP12.6□□□□□ -0.39
SNX1-213ENST00000561026 CT45A6P0DMU7 189 aa12.6□□□□□ -0.39
SNX1-213ENST00000561026 CT45A5P0DMU8 189 aa12.6□□□□□ -0.39
SNX1-213ENST00000561026 CT45A7P0DMV0 189 aa12.6□□□□□ -0.39
SNX1-213ENST00000561026 RPL39P5Q59GN2 51 aa12.6□□□□□ -0.39
SNX1-213ENST00000561026 ASPHD1Q5U4P2 390 aa12.6□□□□□ -0.39
SNX1-213ENST00000561026 LIPKQ5VXJ0 399 aa12.6□□□□□ -0.39
SNX1-213ENST00000561026 FAM131AQ6UXB0 335 aa12.6□□□□□ -0.39
SNX1-213ENST00000561026 MOB1BQ7L9L4 216 aa12.6□□□□□ -0.39
SNX1-213ENST00000561026 FAM89BQ8N5H3 189 aa12.6□□□□□ -0.39
SNX1-213ENST00000561026 SETD6Q8TBK2 473 aa12.6□□□□□ -0.39
SNX1-213ENST00000561026 UFD1Q92890 307 aa12.6□□□□□ -0.39
SNX1-213ENST00000561026 OR5B12Q96R08 314 aa12.6□□□□□ -0.39
SNX1-213ENST00000561026 AGMATQ9BSE5 352 aa12.6□□□□□ -0.39
SNX1-213ENST00000561026 PARP12Q9H0J9 701 aaKnown RBP12.6□□□□□ -0.39
SNX1-213ENST00000561026 LPAR5Q9H1C0 372 aa12.6□□□□□ -0.39
SNX1-213ENST00000561026 GHITMQ9H3K2 345 aa12.6□□□□□ -0.39
SNX1-213ENST00000561026 ITGB1BP1O14713 200 aa12.59□□□□□ -0.39
SNX1-213ENST00000561026 RRHO14718 337 aa12.59□□□□□ -0.39
SNX1-213ENST00000561026 SOCS1O15524 211 aa12.59□□□□□ -0.39
SNX1-213ENST00000561026 ARSBP15848 533 aa12.59□□□□□ -0.39
SNX1-213ENST00000561026 MC5RP33032 325 aa12.59□□□□□ -0.39
SNX1-213ENST00000561026 INSL3P51460 131 aa12.59□□□□□ -0.39
SNX1-213ENST00000561026 GNB1P62873 340 aa12.59□□□□□ -0.39
SNX1-213ENST00000561026 CX3CL1P78423 397 aa12.59□□□□□ -0.39
SNX1-213ENST00000561026 NDPQ00604 133 aa12.59□□□□□ -0.39
SNX1-213ENST00000561026 ZNF616Q08AN1 781 aa12.59□□□□□ -0.39
SNX1-213ENST00000561026 C19orf54Q5BKX5 351 aa12.59□□□□□ -0.39
SNX1-213ENST00000561026 ZNF660Q6AZW8 331 aaPredicted RBP12.59□□□□□ -0.39
SNX1-213ENST00000561026 ABHD14BQ96IU4 210 aa12.59□□□□□ -0.39
SNX1-213ENST00000561026 GFI1Q99684 422 aa12.59□□□□□ -0.39
SNX1-213ENST00000561026 HDHD3Q9BSH5 251 aaPredicted RBP12.59□□□□□ -0.39
SNX1-213ENST00000561026 URM1Q9BTM9 101 aaKnown RBP12.59□□□□□ -0.39
SNX1-213ENST00000561026 FBXL15Q9H469 300 aa12.59□□□□□ -0.39
SNX1-213ENST00000561026 AK3Q9UIJ7 227 aa12.59□□□□□ -0.39
SNX1-213ENST00000561026 FBXO7Q9Y3I1 522 aa12.59□□□□□ -0.39
SNX1-213ENST00000561026 OR5H14A6NHG9 310 aa12.58□□□□□ -0.4
SNX1-213ENST00000561026 H0YJW9 148 aa12.58□□□□□ -0.4
SNX1-213ENST00000561026 SLC17A2O00624 439 aa12.58□□□□□ -0.4
SNX1-213ENST00000561026 ZBTB25P24278 435 aa12.58□□□□□ -0.4
SNX1-213ENST00000561026 CEACAM6P40199 344 aa12.58□□□□□ -0.4
SNX1-213ENST00000561026 CRIP2P52943 208 aaPredicted RBP12.58□□□□□ -0.4
SNX1-213ENST00000561026 TPBGQ13641 420 aa12.58□□□□□ -0.4
SNX1-213ENST00000561026 P2RY14Q15391 338 aa12.58□□□□□ -0.4
SNX1-213ENST00000561026 GLDNQ6ZMI3 551 aaPredicted RBP12.58□□□□□ -0.4
SNX1-213ENST00000561026 TMEM91Q6ZNR0 172 aa12.58□□□□□ -0.4
SNX1-213ENST00000561026 OR5AN1Q8NGI8 311 aa12.58□□□□□ -0.4
SNX1-213ENST00000561026 PLGRKTQ9HBL7 147 aa12.58□□□□□ -0.4
SNX1-213ENST00000561026 NKX1-2Q9UD57 310 aaPredicted RBP12.58□□□□□ -0.4
SNX1-213ENST00000561026 HSF4Q9ULV5 492 aa12.58□□□□□ -0.4
SNX1-213ENST00000561026 ZNF256Q9Y2P7 627 aaPredicted RBP12.58□□□□□ -0.4
SNX1-213ENST00000561026 FOXI3A8MTJ6 420 aaPredicted RBP12.57□□□□□ -0.4
SNX1-213ENST00000561026 ANKRD65E5RJM6 399 aa12.57□□□□□ -0.4
SNX1-213ENST00000561026 FCN1O00602 326 aa12.57□□□□□ -0.4
SNX1-213ENST00000561026 SOX15O60248 233 aa12.57□□□□□ -0.4
SNX1-213ENST00000561026 GSTP1P09211 210 aaKnown RBP12.57□□□□□ -0.4
SNX1-213ENST00000561026 EGR2P11161 476 aaPredicted RBP12.57□□□□□ -0.4
SNX1-213ENST00000561026 ECSCRQ19T08 205 aa12.57□□□□□ -0.4
SNX1-213ENST00000561026 EDARADDQ8WWZ3 215 aa12.57□□□□□ -0.4
SNX1-213ENST00000561026 RNF5Q99942 180 aa12.57□□□□□ -0.4
SNX1-213ENST00000561026 C11orf54Q9H0W9 315 aaPredicted RBP12.57□□□□□ -0.4
SNX1-213ENST00000561026 DUSP21Q9H596 190 aa12.57□□□□□ -0.4
SNX1-213ENST00000561026 OR1A1Q9P1Q5 309 aa12.57□□□□□ -0.4
SNX1-213ENST00000561026 MGAT4AQ9UM21 535 aa12.57□□□□□ -0.4
SNX1-213ENST00000561026 FOXA2Q9Y261 457 aaPredicted RBP12.57□□□□□ -0.4
SNX1-213ENST00000561026 WASHC3Q9Y3C0 194 aa12.57□□□□□ -0.4
SNX1-213ENST00000561026 TPRKBQ9Y3C4 175 aa12.57□□□□□ -0.4
SNX1-213ENST00000561026 NUBP2Q9Y5Y2 271 aa12.57□□□□□ -0.4
SNX1-213ENST00000561026 A0A1W2PN81 502 aa12.56□□□□□ -0.4
SNX1-213ENST00000561026 H7C2Y5 167 aa12.56□□□□□ -0.4
SNX1-213ENST00000561026 HSPA12AO43301 675 aa12.56□□□□□ -0.4
SNX1-213ENST00000561026 PROP1O75360 226 aa12.56□□□□□ -0.4
SNX1-213ENST00000561026 RBBP9O75884 186 aa12.56□□□□□ -0.4
SNX1-213ENST00000561026 ARL6IP5O75915 188 aa12.56□□□□□ -0.4
SNX1-213ENST00000561026 SCTP09683 121 aa12.56□□□□□ -0.4
SNX1-213ENST00000561026 HSMCR30P0CW71 290 aa12.56□□□□□ -0.4
SNX1-213ENST00000561026 CHRNA7P36544 502 aa12.56□□□□□ -0.4
SNX1-213ENST00000561026 TMEM50BP56557 158 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms