RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 OR56B2PQ8NGI1 322 aa14□□□□□ -0.17
TPM1-228ENST00000560975 SGMS2Q8NHU3 365 aa14□□□□□ -0.17
TPM1-228ENST00000560975 TMEM38BQ9NVV0 291 aa14□□□□□ -0.17
TPM1-228ENST00000560975 TNFSF13O75888 250 aa13.99□□□□□ -0.17
TPM1-228ENST00000560975 CTXN2P0C2S0 81 aa13.99□□□□□ -0.17
TPM1-228ENST00000560975 HNRNPKP61978 463 aaKnown RBP eCLIP13.99□□□□□ -0.17
TPM1-228ENST00000560975 LCN2P80188 198 aa13.99□□□□□ -0.17
TPM1-228ENST00000560975 TFF3Q07654 80 aa13.99□□□□□ -0.17
TPM1-228ENST00000560975 LINC01551Q86U37 167 aa13.99□□□□□ -0.17
TPM1-228ENST00000560975 C7orf61Q8IZ16 206 aa13.99□□□□□ -0.17
TPM1-228ENST00000560975 ZNF114Q8NC26 417 aa13.99□□□□□ -0.17
TPM1-228ENST00000560975 REPIN1Q9BWE0 567 aaKnown RBP13.99□□□□□ -0.17
TPM1-228ENST00000560975 FGF23Q9GZV9 251 aaPredicted RBP13.99□□□□□ -0.17
TPM1-228ENST00000560975 ZDHHC11Q9H8X9 412 aa13.99□□□□□ -0.17
TPM1-228ENST00000560975 MTCH1Q9NZJ7 389 aa13.99□□□□□ -0.17
TPM1-228ENST00000560975 CHCHD2Q9Y6H1 151 aaPredicted RBP13.99□□□□□ -0.17
TPM1-228ENST00000560975 EPOPA6NHQ4 379 aa13.99□□□□□ -0.17
TPM1-228ENST00000560975 PIAS2O75928 621 aa13.99□□□□□ -0.17
TPM1-228ENST00000560975 VAMP5O95183 116 aa13.99□□□□□ -0.17
TPM1-228ENST00000560975 SLC25A6P12236 298 aa13.99□□□□□ -0.17
TPM1-228ENST00000560975 GNG10P50151 68 aa13.99□□□□□ -0.17
TPM1-228ENST00000560975 OR5P3Q8WZ94 311 aa13.99□□□□□ -0.17
TPM1-228ENST00000560975 VAMP8Q9BV40 100 aa13.99□□□□□ -0.17
TPM1-228ENST00000560975 WDR1O75083 606 aa13.98□□□□□ -0.17
TPM1-228ENST00000560975 IGHV3-9P01782 118 aa13.98□□□□□ -0.17
TPM1-228ENST00000560975 CCL2P13500 99 aa13.98□□□□□ -0.17
TPM1-228ENST00000560975 FGF12P61328 243 aa13.98□□□□□ -0.17
TPM1-228ENST00000560975 TPTE2P1Q5T6R2 138 aa13.98□□□□□ -0.17
TPM1-228ENST00000560975 C11orf42Q8N5U0 333 aa13.98□□□□□ -0.17
TPM1-228ENST00000560975 OR2H1Q9GZK4 316 aa13.98□□□□□ -0.17
TPM1-228ENST00000560975 NDUFB4O95168 129 aa13.98□□□□□ -0.17
TPM1-228ENST00000560975 CD82P27701 267 aa13.98□□□□□ -0.17
TPM1-228ENST00000560975 PRDX4Q13162 271 aa13.98□□□□□ -0.17
TPM1-228ENST00000560975 TMPRSS7Q7RTY8 843 aa13.98□□□□□ -0.17
TPM1-228ENST00000560975 SYNGR1O43759 233 aa13.97□□□□□ -0.17
TPM1-228ENST00000560975 ATP5G3P48201 142 aa13.97□□□□□ -0.17
TPM1-228ENST00000560975 SOX8P57073 446 aa13.97□□□□□ -0.17
TPM1-228ENST00000560975 CEACAM16Q2WEN9 425 aa13.97□□□□□ -0.17
TPM1-228ENST00000560975 C20orf144Q9BQM9 153 aa13.97□□□□□ -0.17
TPM1-228ENST00000560975 TMEM204Q9BSN7 226 aa13.97□□□□□ -0.17
TPM1-228ENST00000560975 DNAJC4Q9NNZ3 241 aa13.97□□□□□ -0.17
TPM1-228ENST00000560975 RYDENQ9NUL5 291 aaKnown RBP13.97□□□□□ -0.17
TPM1-228ENST00000560975 TRAPPC2LH3BP13 241 aa13.97□□□□□ -0.17
TPM1-228ENST00000560975 YPEL1O60688 119 aa13.97□□□□□ -0.17
TPM1-228ENST00000560975 VENTXO95231 258 aa13.97□□□□□ -0.17
TPM1-228ENST00000560975 IL6RP08887 468 aaPredicted RBP13.97□□□□□ -0.17
TPM1-228ENST00000560975 CBLN1P23435 193 aa13.97□□□□□ -0.17
TPM1-228ENST00000560975 GNB1P62873 340 aa13.97□□□□□ -0.17
TPM1-228ENST00000560975 HYAL1Q12794 435 aa13.97□□□□□ -0.17
TPM1-228ENST00000560975 TMEM183BQ1AE95 376 aa13.97□□□□□ -0.17
TPM1-228ENST00000560975 ZNF585BQ52M93 769 aa13.97□□□□□ -0.17
TPM1-228ENST00000560975 SLC23A3Q6PIS1 610 aa13.97□□□□□ -0.17
TPM1-228ENST00000560975 LSM10Q969L4 123 aaKnown RBP13.97□□□□□ -0.17
TPM1-228ENST00000560975 YPEL2Q96QA6 119 aa13.97□□□□□ -0.17
TPM1-228ENST00000560975 TMEM9BQ9NQ34 198 aa13.97□□□□□ -0.17
TPM1-228ENST00000560975 CLN8Q9UBY8 286 aa13.97□□□□□ -0.17
TPM1-228ENST00000560975 TP53TG3Q9ULZ0 132 aa13.97□□□□□ -0.17
TPM1-228ENST00000560975 SERF1AO75920 110 aa13.97□□□□□ -0.17
TPM1-228ENST00000560975 CRYABP02511 175 aaKnown RBP13.97□□□□□ -0.17
TPM1-228ENST00000560975 TPPP2P59282 170 aa13.97□□□□□ -0.17
TPM1-228ENST00000560975 TMEM144Q7Z5S9 345 aa13.97□□□□□ -0.17
TPM1-228ENST00000560975 PSMF1Q92530 271 aa13.97□□□□□ -0.17
TPM1-228ENST00000560975 OR6C1Q96RD1 312 aa13.97□□□□□ -0.17
TPM1-228ENST00000560975 OR51B6Q9H340 312 aa13.97□□□□□ -0.17
TPM1-228ENST00000560975 RIMS4Q9H426 269 aaPredicted RBP13.97□□□□□ -0.17
TPM1-228ENST00000560975 UMODP07911 640 aa13.96□□□□□ -0.17
TPM1-228ENST00000560975 CCL3P10147 92 aa13.96□□□□□ -0.17
TPM1-228ENST00000560975 TEX43Q6ZNM6 134 aa13.96□□□□□ -0.17
TPM1-228ENST00000560975 FOXB1Q99853 325 aa13.96□□□□□ -0.17
TPM1-228ENST00000560975 FAM103A1Q9BTL3 118 aaKnown RBP13.96□□□□□ -0.17
TPM1-228ENST00000560975 AKIRIN1Q9H9L7 192 aaPredicted RBP13.96□□□□□ -0.17
TPM1-228ENST00000560975 ELOVL5Q9NYP7 299 aa13.96□□□□□ -0.17
TPM1-228ENST00000560975 A0A1W2PR77 199 aa13.96□□□□□ -0.18
TPM1-228ENST00000560975 F2Z2F3 143 aa13.96□□□□□ -0.18
TPM1-228ENST00000560975 MLNRO43193 412 aa13.96□□□□□ -0.18
TPM1-228ENST00000560975 RBFOX2O43251 390 aaKnown RBP eCLIP13.96□□□□□ -0.18
TPM1-228ENST00000560975 ZIC3O60481 467 aa13.96□□□□□ -0.18
TPM1-228ENST00000560975 FKBP2P26885 142 aaKnown RBP13.96□□□□□ -0.18
TPM1-228ENST00000560975 THBS3P49746 956 aa13.96□□□□□ -0.18
TPM1-228ENST00000560975 RAB7AP51149 207 aa13.96□□□□□ -0.18
TPM1-228ENST00000560975 SPINK9Q5DT21 86 aa13.96□□□□□ -0.18
TPM1-228ENST00000560975 HLA-CQ95604 372 aa13.96□□□□□ -0.18
TPM1-228ENST00000560975 UBE2ZQ9H832 354 aaPredicted RBP13.96□□□□□ -0.18
TPM1-228ENST00000560975 IGLV2-14P01704 120 aa13.95□□□□□ -0.18
TPM1-228ENST00000560975 WNT2P09544 360 aa13.95□□□□□ -0.18
TPM1-228ENST00000560975 COX5AP20674 150 aa13.95□□□□□ -0.18
TPM1-228ENST00000560975 LINC00310P59036 64 aa13.95□□□□□ -0.18
TPM1-228ENST00000560975 GCSAMLQ5JQS6 135 aa13.95□□□□□ -0.18
TPM1-228ENST00000560975 C9orf135Q5VTT2 229 aa13.95□□□□□ -0.18
TPM1-228ENST00000560975 AAED1Q7RTV5 226 aa13.95□□□□□ -0.18
TPM1-228ENST00000560975 MKXQ8IYA7 352 aa13.95□□□□□ -0.18
TPM1-228ENST00000560975 SAMD10Q9BYL1 202 aa13.95□□□□□ -0.18
TPM1-228ENST00000560975 FOXJ2Q9P0K8 574 aa13.95□□□□□ -0.18
TPM1-228ENST00000560975 TIMM9Q9Y5J7 89 aa13.95□□□□□ -0.18
TPM1-228ENST00000560975 IGLV3-12A0A075B6K2 115 aa13.95□□□□□ -0.18
TPM1-228ENST00000560975 FAM90A10PA6NDY2 464 aa13.95□□□□□ -0.18
TPM1-228ENST00000560975 FAM90A18PA6NE21 464 aa13.95□□□□□ -0.18
TPM1-228ENST00000560975 FAM90A16PA6NEW6 464 aa13.95□□□□□ -0.18
TPM1-228ENST00000560975 FAM90A20PA6NIJ5 464 aa13.95□□□□□ -0.18
TPM1-228ENST00000560975 FAM90A8PA6NJQ4 464 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms