RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 ST8SIA5O15466 376 aa9.26□□□□□ -0.93
SNX1-212ENST00000560861 RBP4P02753 201 aa9.26□□□□□ -0.93
SNX1-212ENST00000560861 OR5AC1P0C628 307 aa9.26□□□□□ -0.93
SNX1-212ENST00000560861 ERVFRD-1P60508 538 aa9.26□□□□□ -0.93
SNX1-212ENST00000560861 CD83Q01151 205 aa9.26□□□□□ -0.93
SNX1-212ENST00000560861 PAX2Q02962 417 aa9.26□□□□□ -0.93
SNX1-212ENST00000560861 LTC4SQ16873 150 aa9.26□□□□□ -0.93
SNX1-212ENST00000560861 CT45A1Q5HYN5 189 aa9.26□□□□□ -0.93
SNX1-212ENST00000560861 DCAF12L2Q5VW00 463 aa9.26□□□□□ -0.93
SNX1-212ENST00000560861 ZNF787Q6DD87 383 aa9.26□□□□□ -0.93
SNX1-212ENST00000560861 ZNF645Q8N7E2 425 aa9.26□□□□□ -0.93
SNX1-212ENST00000560861 C8orf31Q8N9H6 132 aa9.26□□□□□ -0.93
SNX1-212ENST00000560861 OR5M8Q8NGP6 311 aa9.26□□□□□ -0.93
SNX1-212ENST00000560861 CLDND2Q8NHS1 167 aa9.26□□□□□ -0.93
SNX1-212ENST00000560861 CT45A3Q8NHU0 189 aa9.26□□□□□ -0.93
SNX1-212ENST00000560861 CASTOR1Q8WTX7 329 aa9.26□□□□□ -0.93
SNX1-212ENST00000560861 GLYATL2Q8WU03 294 aa9.26□□□□□ -0.93
SNX1-212ENST00000560861 NINJ1Q92982 152 aa9.26□□□□□ -0.93
SNX1-212ENST00000560861 MSI2Q96DH6 328 aaKnown RBP9.26□□□□□ -0.93
SNX1-212ENST00000560861 WDR89Q96FK6 387 aaPredicted RBP9.26□□□□□ -0.93
SNX1-212ENST00000560861 TP53RKQ96S44 253 aa9.26□□□□□ -0.93
SNX1-212ENST00000560861 SUCNR1Q9BXA5 334 aa9.26□□□□□ -0.93
SNX1-212ENST00000560861 ZNF436Q9C0F3 470 aaPredicted RBP9.26□□□□□ -0.93
SNX1-212ENST00000560861 BPESC1Q9GZL8 116 aa9.26□□□□□ -0.93
SNX1-212ENST00000560861 CSMD2Q7Z408 3487 aa9.26□□□□□ -0.93
SNX1-212ENST00000560861 ITPR2Q14571 2701 aa9.25□□□□□ -0.93
SNX1-212ENST00000560861 WNK2Q9Y3S1 2297 aa9.25□□□□□ -0.93
SNX1-212ENST00000560861 TEX13DA0A0J9YY54 714 aaPredicted RBP9.25□□□□□ -0.93
SNX1-212ENST00000560861 C3orf85A0A1B0GTC6 90 aa9.25□□□□□ -0.93
SNX1-212ENST00000560861 H0Y980 276 aa9.25□□□□□ -0.93
SNX1-212ENST00000560861 NDUFS8O00217 210 aa9.25□□□□□ -0.93
SNX1-212ENST00000560861 RGS11O94810 467 aa9.25□□□□□ -0.93
SNX1-212ENST00000560861 IFNA2P01563 188 aa9.25□□□□□ -0.93
SNX1-212ENST00000560861 ANXA3P12429 323 aa9.25□□□□□ -0.93
SNX1-212ENST00000560861 UCP1P25874 307 aa9.25□□□□□ -0.93
SNX1-212ENST00000560861 ATP5J2P56134 94 aa9.25□□□□□ -0.93
SNX1-212ENST00000560861 H2BFSP57053 126 aa9.25□□□□□ -0.93
SNX1-212ENST00000560861 LIN54Q6MZP7 749 aa9.25□□□□□ -0.93
SNX1-212ENST00000560861 LIAT1Q6ZQX7 453 aa9.25□□□□□ -0.93
SNX1-212ENST00000560861 C1orf229Q6ZS94 237 aaPredicted RBP9.25□□□□□ -0.93
SNX1-212ENST00000560861 SLC25A48Q6ZT89 311 aaKnown RBP9.25□□□□□ -0.93
SNX1-212ENST00000560861 ODF3L1Q8IXM7 274 aa9.25□□□□□ -0.93
SNX1-212ENST00000560861 LINC00311Q8N616 119 aa9.25□□□□□ -0.93
SNX1-212ENST00000560861 LHFPL5Q8TAF8 219 aa9.25□□□□□ -0.93
SNX1-212ENST00000560861 LEAP2Q969E1 77 aa9.25□□□□□ -0.93
SNX1-212ENST00000560861 ABHD14BQ96IU4 210 aa9.25□□□□□ -0.93
SNX1-212ENST00000560861 C18orf12Q96KH6 178 aa9.25□□□□□ -0.93
SNX1-212ENST00000560861 DMRTB1Q96MA1 342 aa9.25□□□□□ -0.93
SNX1-212ENST00000560861 TMEM56Q96MV1 263 aa9.25□□□□□ -0.93
SNX1-212ENST00000560861 GPHA2Q96T91 129 aa9.25□□□□□ -0.93
SNX1-212ENST00000560861 PHB2Q99623 299 aa9.25□□□□□ -0.93
SNX1-212ENST00000560861 ZNF251Q9BRH9 671 aa9.25□□□□□ -0.93
SNX1-212ENST00000560861 SSBP3Q9BWW4 388 aaPredicted RBP9.25□□□□□ -0.93
SNX1-212ENST00000560861 TMEM222Q9H0R3 208 aa9.25□□□□□ -0.93
SNX1-212ENST00000560861 OR2D2Q9H210 308 aa9.25□□□□□ -0.93
SNX1-212ENST00000560861 SDHAF2Q9NX18 166 aa9.25□□□□□ -0.93
SNX1-212ENST00000560861 RNF150Q9ULK6 438 aa9.25□□□□□ -0.93
SNX1-212ENST00000560861 PSG11Q9UQ72 335 aa9.25□□□□□ -0.93
SNX1-212ENST00000560861 TMEM56-RWDD3S4R434 201 aa9.25□□□□□ -0.93
SNX1-212ENST00000560861 PPIAL4CA0A0B4J2A2 164 aa9.24□□□□□ -0.93
SNX1-212ENST00000560861 GOSR2O14653 212 aa9.24□□□□□ -0.93
SNX1-212ENST00000560861 PHF1O43189 567 aaPredicted RBP9.24□□□□□ -0.93
SNX1-212ENST00000560861 SLC22A5O76082 557 aa9.24□□□□□ -0.93
SNX1-212ENST00000560861 SIX6O95475 246 aa9.24□□□□□ -0.93
SNX1-212ENST00000560861 GIPP09681 153 aaPredicted RBP9.24□□□□□ -0.93
SNX1-212ENST00000560861 PPIAL4GP0DN37 164 aa9.24□□□□□ -0.93
SNX1-212ENST00000560861 IGHV1-8P0DP01 117 aa9.24□□□□□ -0.93
SNX1-212ENST00000560861 F2RP25116 425 aa9.24□□□□□ -0.93
SNX1-212ENST00000560861 ZFP36P26651 326 aaKnown RBP9.24□□□□□ -0.93
SNX1-212ENST00000560861 RAB7AP51149 207 aa9.24□□□□□ -0.93
SNX1-212ENST00000560861 BRWD1-AS2P59051 145 aa9.24□□□□□ -0.93
SNX1-212ENST00000560861 GNB2P62879 340 aa9.24□□□□□ -0.93
SNX1-212ENST00000560861 RPL30P62888 115 aaKnown RBP9.24□□□□□ -0.93
SNX1-212ENST00000560861 IL15RAQ13261 267 aa9.24□□□□□ -0.93
SNX1-212ENST00000560861 SP6Q3SY56 376 aa9.24□□□□□ -0.93
SNX1-212ENST00000560861 CMTM1Q8IZ96 169 aa9.24□□□□□ -0.93
SNX1-212ENST00000560861 Q8N7P7 452 aa9.24□□□□□ -0.93
SNX1-212ENST00000560861 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.24□□□□□ -0.93
SNX1-212ENST00000560861 COQ8AQ8NI60 647 aa9.24□□□□□ -0.93
SNX1-212ENST00000560861 ABHD14AQ9BUJ0 271 aa9.24□□□□□ -0.93
SNX1-212ENST00000560861 NARFLQ9H6Q4 476 aa9.24□□□□□ -0.93
SNX1-212ENST00000560861 RAB18Q9NP72 206 aa9.24□□□□□ -0.93
SNX1-212ENST00000560861 SESN1Q9Y6P5 492 aa9.24□□□□□ -0.93
SNX1-212ENST00000560861 A0A096LNT2 108 aa9.23□□□□□ -0.93
SNX1-212ENST00000560861 CCSO14618 274 aa9.23□□□□□ -0.93
SNX1-212ENST00000560861 TNFSF12O43508 249 aa9.23□□□□□ -0.93
SNX1-212ENST00000560861 ADAP1O75689 374 aa9.23□□□□□ -0.93
SNX1-212ENST00000560861 B3GALNT1O75752 331 aa9.23□□□□□ -0.93
SNX1-212ENST00000560861 CDS2O95674 445 aa9.23□□□□□ -0.93
SNX1-212ENST00000560861 IGHV3-7P01780 117 aa9.23□□□□□ -0.93
SNX1-212ENST00000560861 LIPFP07098 398 aa9.23□□□□□ -0.93
SNX1-212ENST00000560861 NFYBP25208 207 aa9.23□□□□□ -0.93
SNX1-212ENST00000560861 ZNF585BQ52M93 769 aa9.23□□□□□ -0.93
SNX1-212ENST00000560861 ESCO2Q56NI9 601 aa9.23□□□□□ -0.93
SNX1-212ENST00000560861 DMRTA1Q5VZB9 504 aa9.23□□□□□ -0.93
SNX1-212ENST00000560861 C11orf88Q6PI97 169 aa9.23□□□□□ -0.93
SNX1-212ENST00000560861 ZNF66Q6ZN08 573 aa9.23□□□□□ -0.93
SNX1-212ENST00000560861 ASB13Q8WXK3 278 aa9.23□□□□□ -0.93
SNX1-212ENST00000560861 FAM168AQ92567 244 aa9.23□□□□□ -0.93
SNX1-212ENST00000560861 IL22RA2Q969J5 263 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms