RNA–Protein interactions for RNA: ENST00000560427.1

NEDD8-208, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-208ENST00000560427 ODF3L1Q8IXM7 274 aa10.43□□□□□ -0.74
NEDD8-208ENST00000560427 DRAM1Q8N682 238 aa10.43□□□□□ -0.74
NEDD8-208ENST00000560427 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.43□□□□□ -0.74
NEDD8-208ENST00000560427 DYNC2LI1Q8TCX1 351 aa10.43□□□□□ -0.74
NEDD8-208ENST00000560427 C15orf40Q8WUR7 153 aa10.43□□□□□ -0.74
NEDD8-208ENST00000560427 CAPSLQ8WWF8 208 aa10.43□□□□□ -0.74
NEDD8-208ENST00000560427 S1PR3Q99500 378 aa10.43□□□□□ -0.74
NEDD8-208ENST00000560427 GINS4Q9BRT9 223 aa10.43□□□□□ -0.74
NEDD8-208ENST00000560427 AGMATQ9BSE5 352 aa10.43□□□□□ -0.74
NEDD8-208ENST00000560427 ST6GALNAC5Q9BVH7 336 aa10.43□□□□□ -0.74
NEDD8-208ENST00000560427 RDH8Q9NYR8 311 aa10.43□□□□□ -0.74
NEDD8-208ENST00000560427 ANXA10Q9UJ72 324 aa10.43□□□□□ -0.74
NEDD8-208ENST00000560427 ADAM30Q9UKF2 790 aa10.43□□□□□ -0.74
NEDD8-208ENST00000560427 SAA2-SAA4A0A096LPE2 208 aa10.42□□□□□ -0.74
NEDD8-208ENST00000560427 BET1O15155 118 aa10.42□□□□□ -0.74
NEDD8-208ENST00000560427 ST8SIA5O15466 376 aa10.42□□□□□ -0.74
NEDD8-208ENST00000560427 HPGDSO60760 199 aa10.42□□□□□ -0.74
NEDD8-208ENST00000560427 SNRNP70P08621 437 aaKnown RBP10.42□□□□□ -0.74
NEDD8-208ENST00000560427 SAA2P0DJI9 122 aaPredicted RBP10.42□□□□□ -0.74
NEDD8-208ENST00000560427 EBI3Q14213 229 aa10.42□□□□□ -0.74
NEDD8-208ENST00000560427 IGSF11Q5DX21 431 aa10.42□□□□□ -0.74
NEDD8-208ENST00000560427 MOB3BQ86TA1 216 aa10.42□□□□□ -0.74
NEDD8-208ENST00000560427 MAFIPQ8WZ33 124 aa10.42□□□□□ -0.74
NEDD8-208ENST00000560427 RBM14Q96PK6 669 aaKnown RBP10.42□□□□□ -0.74
NEDD8-208ENST00000560427 C11orf54Q9H0W9 315 aaPredicted RBP10.42□□□□□ -0.74
NEDD8-208ENST00000560427 RBM38Q9H0Z9 239 aaKnown RBP10.42□□□□□ -0.74
NEDD8-208ENST00000560427 SCPEP1Q9HB40 452 aa10.42□□□□□ -0.74
NEDD8-208ENST00000560427 CLPSL1A2RUU4 121 aa10.41□□□□□ -0.74
NEDD8-208ENST00000560427 SULT1C2O00338 296 aa10.41□□□□□ -0.74
NEDD8-208ENST00000560427 IGKV1D-33P01593 117 aa10.41□□□□□ -0.74
NEDD8-208ENST00000560427 IGKV1-33P01594 117 aa10.41□□□□□ -0.74
NEDD8-208ENST00000560427 TMEM11P17152 192 aa10.41□□□□□ -0.74
NEDD8-208ENST00000560427 ELK1P19419 428 aa10.41□□□□□ -0.74
NEDD8-208ENST00000560427 PRSS3P35030 304 aa10.41□□□□□ -0.74
NEDD8-208ENST00000560427 REG1BP48304 166 aa10.41□□□□□ -0.74
NEDD8-208ENST00000560427 ARPC4P59998 168 aa10.41□□□□□ -0.74
NEDD8-208ENST00000560427 Q6ZSV7 163 aa10.41□□□□□ -0.74
NEDD8-208ENST00000560427 TMEM219Q86XT9 240 aa10.41□□□□□ -0.74
NEDD8-208ENST00000560427 H1FOOQ8IZA3 346 aaPredicted RBP10.41□□□□□ -0.74
NEDD8-208ENST00000560427 Q8N2B8 174 aa10.41□□□□□ -0.74
NEDD8-208ENST00000560427 BEST4Q8NFU0 473 aa10.41□□□□□ -0.74
NEDD8-208ENST00000560427 OR8H1Q8NGG4 311 aa10.41□□□□□ -0.74
NEDD8-208ENST00000560427 OR2T10Q8NGZ9 312 aa10.41□□□□□ -0.74
NEDD8-208ENST00000560427 SLC25A33Q9BSK2 321 aa10.41□□□□□ -0.74
NEDD8-208ENST00000560427 RSL24D1Q9UHA3 163 aaKnown RBP10.41□□□□□ -0.74
NEDD8-208ENST00000560427 ZNF221Q9UK13 617 aa10.41□□□□□ -0.74
NEDD8-208ENST00000560427 ANAPC10Q9UM13 185 aa10.41□□□□□ -0.74
NEDD8-208ENST00000560427 GAB2Q9UQC2 676 aa10.41□□□□□ -0.74
NEDD8-208ENST00000560427 MOB4Q9Y3A3 225 aa10.41□□□□□ -0.74
NEDD8-208ENST00000560427 STAB1Q9NY15 2570 aa10.4□□□□□ -0.74
NEDD8-208ENST00000560427 IGKV1D-8A0A087WSZ0 117 aa10.4□□□□□ -0.74
NEDD8-208ENST00000560427 CCDC160A6NGH7 325 aa10.4□□□□□ -0.74
NEDD8-208ENST00000560427 FAM25AB3EWG3 89 aa10.4□□□□□ -0.74
NEDD8-208ENST00000560427 FAM25CB3EWG5 89 aa10.4□□□□□ -0.74
NEDD8-208ENST00000560427 FAM25GB3EWG6 89 aa10.4□□□□□ -0.74
NEDD8-208ENST00000560427 FGF16O43320 207 aa10.4□□□□□ -0.74
NEDD8-208ENST00000560427 MOSP00540 346 aa10.4□□□□□ -0.74
NEDD8-208ENST00000560427 HLA-DQB1P01920 261 aa10.4□□□□□ -0.74
NEDD8-208ENST00000560427 MDKP21741 143 aaPredicted RBP10.4□□□□□ -0.74
NEDD8-208ENST00000560427 CD24P25063 80 aa10.4□□□□□ -0.74
NEDD8-208ENST00000560427 GPR12P47775 334 aa10.4□□□□□ -0.74
NEDD8-208ENST00000560427 LSAMPQ13449 338 aa10.4□□□□□ -0.74
NEDD8-208ENST00000560427 OR2T6Q8NHC8 308 aa10.4□□□□□ -0.74
NEDD8-208ENST00000560427 LINC01006Q8NI28 216 aa10.4□□□□□ -0.74
NEDD8-208ENST00000560427 ZNF251Q9BRH9 671 aa10.4□□□□□ -0.74
NEDD8-208ENST00000560427 PRSS22Q9GZN4 317 aa10.4□□□□□ -0.74
NEDD8-208ENST00000560427 PARP12Q9H0J9 701 aaKnown RBP10.4□□□□□ -0.74
NEDD8-208ENST00000560427 IFT46Q9NQC8 304 aa10.4□□□□□ -0.74
NEDD8-208ENST00000560427 RABL2AQ9UBK7 228 aaPredicted RBP10.4□□□□□ -0.74
NEDD8-208ENST00000560427 EXTL2Q9UBQ6 330 aa10.4□□□□□ -0.74
NEDD8-208ENST00000560427 RABL2BQ9UNT1 228 aa10.4□□□□□ -0.74
NEDD8-208ENST00000560427 OR5H14A6NHG9 310 aa10.39□□□□□ -0.75
NEDD8-208ENST00000560427 RGS5O15539 181 aa10.39□□□□□ -0.75
NEDD8-208ENST00000560427 SLC22A5O76082 557 aa10.39□□□□□ -0.75
NEDD8-208ENST00000560427 MC5RP33032 325 aa10.39□□□□□ -0.75
NEDD8-208ENST00000560427 OR3A3P47888 321 aa10.39□□□□□ -0.75
NEDD8-208ENST00000560427 TAS2R46P59540 309 aa10.39□□□□□ -0.75
NEDD8-208ENST00000560427 HES1Q14469 280 aa10.39□□□□□ -0.75
NEDD8-208ENST00000560427 Q8N6K4 173 aa10.39□□□□□ -0.75
NEDD8-208ENST00000560427 C3orf56Q8N813 242 aa10.39□□□□□ -0.75
NEDD8-208ENST00000560427 GPX8Q8TED1 209 aa10.39□□□□□ -0.75
NEDD8-208ENST00000560427 EAF1Q96JC9 268 aaPredicted RBP10.39□□□□□ -0.75
NEDD8-208ENST00000560427 NABP2Q9BQ15 211 aa10.39□□□□□ -0.75
NEDD8-208ENST00000560427 ZNF747Q9BV97 191 aa10.39□□□□□ -0.75
NEDD8-208ENST00000560427 MRPL20Q9BYC9 149 aaKnown RBP10.39□□□□□ -0.75
NEDD8-208ENST00000560427 SLIRPQ9GZT3 109 aaKnown RBP10.39□□□□□ -0.75
NEDD8-208ENST00000560427 OR2D2Q9H210 308 aa10.39□□□□□ -0.75
NEDD8-208ENST00000560427 NECAP2Q9NVZ3 263 aa10.39□□□□□ -0.75
NEDD8-208ENST00000560427 NDUFA13Q9P0J0 144 aa10.39□□□□□ -0.75
NEDD8-208ENST00000560427 OR2W1Q9Y3N9 320 aa10.39□□□□□ -0.75
NEDD8-208ENST00000560427 TUSC2O75896 110 aa10.38□□□□□ -0.75
NEDD8-208ENST00000560427 OR8U9P0C7N5 309 aa10.38□□□□□ -0.75
NEDD8-208ENST00000560427 PTHLHP12272 177 aa10.38□□□□□ -0.75
NEDD8-208ENST00000560427 NAT1P18440 290 aa10.38□□□□□ -0.75
NEDD8-208ENST00000560427 PROK1P58294 105 aa10.38□□□□□ -0.75
NEDD8-208ENST00000560427 MRPS10P82664 201 aaKnown RBP10.38□□□□□ -0.75
NEDD8-208ENST00000560427 RPL39P5Q59GN2 51 aa10.38□□□□□ -0.75
NEDD8-208ENST00000560427 GVQW1Q8N7I0 195 aa10.38□□□□□ -0.75
NEDD8-208ENST00000560427 OR5AP2Q8NGF4 316 aa10.38□□□□□ -0.75
NEDD8-208ENST00000560427 OR5AN1Q8NGI8 311 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms