RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 EDA2RQ9HAV5 297 aa12.11□□□□□ -0.47
CSPG4P12-202ENST00000559989 CCL28Q9NRJ3 127 aa12.11□□□□□ -0.47
CSPG4P12-202ENST00000559989 DPRXA6NFQ7 191 aa12.11□□□□□ -0.47
CSPG4P12-202ENST00000559989 ATOH7Q8N100 152 aa12.11□□□□□ -0.47
CSPG4P12-202ENST00000559989 SDHCQ99643 169 aaPredicted RBP12.11□□□□□ -0.47
CSPG4P12-202ENST00000559989 AMER3Q8N944 861 aa12.11□□□□□ -0.47
CSPG4P12-202ENST00000559989 SRSF4Q08170 494 aaKnown RBP12.11□□□□□ -0.47
CSPG4P12-202ENST00000559989 LRRC37A3O60309 1634 aa12.11□□□□□ -0.47
CSPG4P12-202ENST00000559989 PRKNO60260 465 aaPredicted RBP12.11□□□□□ -0.47
CSPG4P12-202ENST00000559989 PLA2G3Q9NZ20 509 aa12.11□□□□□ -0.47
CSPG4P12-202ENST00000559989 TUBD1Q9UJT1 453 aa12.11□□□□□ -0.47
CSPG4P12-202ENST00000559989 LYZL2Q7Z4W2 148 aa12.1□□□□□ -0.47
CSPG4P12-202ENST00000559989 PGLYRP3Q96LB9 341 aa12.1□□□□□ -0.47
CSPG4P12-202ENST00000559989 NTMQ9P121 344 aa12.1□□□□□ -0.47
CSPG4P12-202ENST00000559989 TRAV12-3A0A0B4J271 114 aa12.1□□□□□ -0.47
CSPG4P12-202ENST00000559989 PGPA6NDG6 321 aa12.1□□□□□ -0.47
CSPG4P12-202ENST00000559989 H0Y8X5 98 aa12.1□□□□□ -0.47
CSPG4P12-202ENST00000559989 RPL36A-HNRNPH2H7BZ11 118 aa12.1□□□□□ -0.47
CSPG4P12-202ENST00000559989 CA11O75493 328 aa12.1□□□□□ -0.47
CSPG4P12-202ENST00000559989 AGAP20933 346 aa12.1□□□□□ -0.47
CSPG4P12-202ENST00000559989 ZFAND6Q6FIF0 208 aa12.1□□□□□ -0.47
CSPG4P12-202ENST00000559989 ZNF645Q8N7E2 425 aa12.1□□□□□ -0.47
CSPG4P12-202ENST00000559989 CADM4Q8NFZ8 388 aa12.1□□□□□ -0.47
CSPG4P12-202ENST00000559989 ZNF576Q9H609 170 aa12.1□□□□□ -0.47
CSPG4P12-202ENST00000559989 ZNF646O15015 1829 aaPredicted RBP12.1□□□□□ -0.47
CSPG4P12-202ENST00000559989 YAE1D1Q9NRH1 226 aa12.1□□□□□ -0.47
CSPG4P12-202ENST00000559989 APOMO95445 188 aa12.1□□□□□ -0.47
CSPG4P12-202ENST00000559989 VKORC1L1Q8N0U8 176 aa12.1□□□□□ -0.47
CSPG4P12-202ENST00000559989 PATE1Q8WXA2 126 aa12.1□□□□□ -0.47
CSPG4P12-202ENST00000559989 SIGLEC5O15389 551 aa12.1□□□□□ -0.47
CSPG4P12-202ENST00000559989 GAPDHP04406 335 aaKnown RBP12.1□□□□□ -0.47
CSPG4P12-202ENST00000559989 LINC00869P0C866 280 aa12.1□□□□□ -0.47
CSPG4P12-202ENST00000559989 SSTR5P35346 364 aa12.1□□□□□ -0.47
CSPG4P12-202ENST00000559989 MRPL24Q96A35 216 aaKnown RBP12.1□□□□□ -0.47
CSPG4P12-202ENST00000559989 LINC00615Q96LM1 132 aaPredicted RBP12.1□□□□□ -0.47
CSPG4P12-202ENST00000559989 MGST2Q99735 147 aa12.1□□□□□ -0.47
CSPG4P12-202ENST00000559989 QTRT1Q9BXR0 403 aaKnown RBP12.1□□□□□ -0.47
CSPG4P12-202ENST00000559989 LILRA5A6NI73 299 aa12.09□□□□□ -0.47
CSPG4P12-202ENST00000559989 HOXA3O43365 443 aaPredicted RBP12.09□□□□□ -0.47
CSPG4P12-202ENST00000559989 PF4V1P10720 104 aa12.09□□□□□ -0.47
CSPG4P12-202ENST00000559989 LSM6P62312 80 aaKnown RBP12.09□□□□□ -0.47
CSPG4P12-202ENST00000559989 FIZ1Q96SL8 496 aa12.09□□□□□ -0.47
CSPG4P12-202ENST00000559989 MRPL20Q9BYC9 149 aaKnown RBP12.09□□□□□ -0.47
CSPG4P12-202ENST00000559989 A0A1B0GUL6 1792 aa12.09□□□□□ -0.47
CSPG4P12-202ENST00000559989 TNFSF14O43557 240 aa12.09□□□□□ -0.47
CSPG4P12-202ENST00000559989 OR11H7Q8NGC8 314 aa12.09□□□□□ -0.47
CSPG4P12-202ENST00000559989 ZBP1Q9H171 429 aa12.09□□□□□ -0.47
CSPG4P12-202ENST00000559989 SOCS1O15524 211 aa12.09□□□□□ -0.47
CSPG4P12-202ENST00000559989 ELOVL5Q9NYP7 299 aa12.09□□□□□ -0.47
CSPG4P12-202ENST00000559989 IGHV3OR15-7A0A075B7D8 119 aa12.09□□□□□ -0.47
CSPG4P12-202ENST00000559989 ALKAL1Q6UXT8 129 aa12.09□□□□□ -0.47
CSPG4P12-202ENST00000559989 LTBP3Q9NS15 1303 aa12.09□□□□□ -0.47
CSPG4P12-202ENST00000559989 MUC1P15941 1255 aaPredicted RBP12.09□□□□□ -0.47
CSPG4P12-202ENST00000559989 LCN2P80188 198 aa12.09□□□□□ -0.47
CSPG4P12-202ENST00000559989 C1orf174Q8IYL3 243 aa12.09□□□□□ -0.47
CSPG4P12-202ENST00000559989 SNRNP200O75643 2136 aaKnown RBP12.08□□□□□ -0.47
CSPG4P12-202ENST00000559989 SCGB3A1Q96QR1 104 aa12.08□□□□□ -0.47
CSPG4P12-202ENST00000559989 NUTF2P61970 127 aaKnown RBP12.08□□□□□ -0.48
CSPG4P12-202ENST00000559989 RAE1P78406 368 aaKnown RBP12.08□□□□□ -0.48
CSPG4P12-202ENST00000559989 MEF2BQ02080 365 aaPredicted RBP12.08□□□□□ -0.48
CSPG4P12-202ENST00000559989 ATP5G2Q06055 141 aa12.08□□□□□ -0.48
CSPG4P12-202ENST00000559989 SPSB4Q96A44 273 aa12.08□□□□□ -0.48
CSPG4P12-202ENST00000559989 RPL27AP46776 148 aaKnown RBP12.08□□□□□ -0.48
CSPG4P12-202ENST00000559989 COL10A1Q03692 680 aa12.08□□□□□ -0.48
CSPG4P12-202ENST00000559989 INSL4Q14641 139 aa12.08□□□□□ -0.48
CSPG4P12-202ENST00000559989 ACSF3Q4G176 576 aaPredicted RBP12.08□□□□□ -0.48
CSPG4P12-202ENST00000559989 FOXQ1Q9C009 403 aa12.08□□□□□ -0.48
CSPG4P12-202ENST00000559989 MS4A5Q9H3V2 200 aa12.08□□□□□ -0.48
CSPG4P12-202ENST00000559989 FRRS1LQ9P0K9 344 aa12.08□□□□□ -0.48
CSPG4P12-202ENST00000559989 ARHGEF17Q96PE2 2063 aaPredicted RBP12.08□□□□□ -0.48
CSPG4P12-202ENST00000559989 MDKP21741 143 aaPredicted RBP12.08□□□□□ -0.48
CSPG4P12-202ENST00000559989 CISD1Q9NZ45 108 aaKnown RBP12.08□□□□□ -0.48
CSPG4P12-202ENST00000559989 GGTLC3B5MD39 225 aa12.08□□□□□ -0.48
CSPG4P12-202ENST00000559989 PRR35P0CG20 571 aa12.08□□□□□ -0.48
CSPG4P12-202ENST00000559989 ARL14EPLP0DKL9 152 aa12.08□□□□□ -0.48
CSPG4P12-202ENST00000559989 ASIPP42127 132 aa12.08□□□□□ -0.48
CSPG4P12-202ENST00000559989 LAMB1P07942 1786 aa12.08□□□□□ -0.48
CSPG4P12-202ENST00000559989 KLK8O60259 260 aa12.08□□□□□ -0.48
CSPG4P12-202ENST00000559989 CEACAM4O75871 244 aa12.08□□□□□ -0.48
CSPG4P12-202ENST00000559989 TGFAP01135 160 aa12.08□□□□□ -0.48
CSPG4P12-202ENST00000559989 RCC1P18754 421 aaPredicted RBP12.08□□□□□ -0.48
CSPG4P12-202ENST00000559989 TUBA4BQ9H853 241 aa12.08□□□□□ -0.48
CSPG4P12-202ENST00000559989 ZNF430Q9H8G1 570 aaPredicted RBP12.08□□□□□ -0.48
CSPG4P12-202ENST00000559989 RGPD5Q99666 1765 aa12.08□□□□□ -0.48
CSPG4P12-202ENST00000559989 ABHD1Q96SE0 405 aa12.07□□□□□ -0.48
CSPG4P12-202ENST00000559989 C19orf24Q9BVV8 132 aa12.07□□□□□ -0.48
CSPG4P12-202ENST00000559989 SF3B6Q9Y3B4 125 aaKnown RBP12.07□□□□□ -0.48
CSPG4P12-202ENST00000559989 ASCC3Q8N3C0 2202 aaKnown RBP12.07□□□□□ -0.48
CSPG4P12-202ENST00000559989 CLEC2AQ6UVW9 174 aa12.07□□□□□ -0.48
CSPG4P12-202ENST00000559989 PIKFYVEQ9Y2I7 2098 aa12.07□□□□□ -0.48
CSPG4P12-202ENST00000559989 SYNGR3O43761 229 aa12.07□□□□□ -0.48
CSPG4P12-202ENST00000559989 GCM2O75603 506 aaPredicted RBP12.07□□□□□ -0.48
CSPG4P12-202ENST00000559989 GGACTQ9BVM4 153 aa12.07□□□□□ -0.48
CSPG4P12-202ENST00000559989 TRIP12Q14669 1992 aaPredicted RBP12.07□□□□□ -0.48
CSPG4P12-202ENST00000559989 GLULP15104 373 aa12.07□□□□□ -0.48
CSPG4P12-202ENST00000559989 GAGE2EQ4V326 116 aa12.07□□□□□ -0.48
CSPG4P12-202ENST00000559989 SH3BGRL3Q9H299 93 aa12.07□□□□□ -0.48
CSPG4P12-202ENST00000559989 GAGE2DQ9UEU5 116 aa12.07□□□□□ -0.48
CSPG4P12-202ENST00000559989 CXCL3P19876 107 aa12.07□□□□□ -0.48
CSPG4P12-202ENST00000559989 LHFPL4Q7Z7J7 247 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms