RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 IGKV1D-17A0A075B6S4 117 aa14.82□□□□□ -0.04
SNX1-208ENST00000559844 MGST3O14880 152 aa14.82□□□□□ -0.04
SNX1-208ENST00000559844 MMP9P14780 707 aa14.82□□□□□ -0.04
SNX1-208ENST00000559844 GLIPR1P48060 266 aa14.82□□□□□ -0.04
SNX1-208ENST00000559844 TLE4Q04727 773 aa14.82□□□□□ -0.04
SNX1-208ENST00000559844 CCDC28AQ8IWP9 274 aa14.82□□□□□ -0.04
SNX1-208ENST00000559844 BOLLQ8N9W6 283 aaKnown RBP14.82□□□□□ -0.04
SNX1-208ENST00000559844 DMBX1Q8NFW5 382 aa14.82□□□□□ -0.04
SNX1-208ENST00000559844 DIRC2Q96SL1 478 aa14.82□□□□□ -0.04
SNX1-208ENST00000559844 BARX1Q9HBU1 254 aaPredicted RBP14.82□□□□□ -0.04
SNX1-208ENST00000559844 RAI1Q7Z5J4 1906 aaPredicted RBP14.82□□□□□ -0.04
SNX1-208ENST00000559844 SPINT2O43291 252 aa14.82□□□□□ -0.04
SNX1-208ENST00000559844 IGHV1-46P01743 117 aa14.82□□□□□ -0.04
SNX1-208ENST00000559844 TFF1P04155 84 aa14.82□□□□□ -0.04
SNX1-208ENST00000559844 FGF2P09038 288 aa14.82□□□□□ -0.04
SNX1-208ENST00000559844 AKAP6Q13023 2319 aa14.82□□□□□ -0.04
SNX1-208ENST00000559844 RPL7L1Q6DKI1 246 aaKnown RBP14.82□□□□□ -0.04
SNX1-208ENST00000559844 DRAM1Q8N682 238 aa14.82□□□□□ -0.04
SNX1-208ENST00000559844 LSM10Q969L4 123 aaKnown RBP14.82□□□□□ -0.04
SNX1-208ENST00000559844 RNF7Q9UBF6 113 aa14.82□□□□□ -0.04
SNX1-208ENST00000559844 A0A1B0GU03 582 aa14.81□□□□□ -0.04
SNX1-208ENST00000559844 SHOXO15266 292 aa14.81□□□□□ -0.04
SNX1-208ENST00000559844 ADIPOQQ15848 244 aa14.81□□□□□ -0.04
SNX1-208ENST00000559844 ZNF787Q6DD87 383 aa14.81□□□□□ -0.04
SNX1-208ENST00000559844 OR13A1Q8NGR1 328 aa14.81□□□□□ -0.04
SNX1-208ENST00000559844 TMED6Q8WW62 240 aa14.81□□□□□ -0.04
SNX1-208ENST00000559844 C14orf79Q96F83 325 aa14.81□□□□□ -0.04
SNX1-208ENST00000559844 DSCAMO60469 2012 aa14.81□□□□□ -0.04
SNX1-208ENST00000559844 CELSR2Q9HCU4 2923 aa14.8□□□□□ -0.04
SNX1-208ENST00000559844 BORCS7-ASMTA0A0B4J1R7 106 aa14.8□□□□□ -0.04
SNX1-208ENST00000559844 VSTM5A8MXK1 200 aa14.8□□□□□ -0.04
SNX1-208ENST00000559844 A8MXK9 166 aa14.8□□□□□ -0.04
SNX1-208ENST00000559844 ADH4P08319 380 aa14.8□□□□□ -0.04
SNX1-208ENST00000559844 OR4A8P0C604 315 aa14.8□□□□□ -0.04
SNX1-208ENST00000559844 GZMHP20718 246 aa14.8□□□□□ -0.04
SNX1-208ENST00000559844 VAMP2P63027 116 aa14.8□□□□□ -0.04
SNX1-208ENST00000559844 HTD2P86397 168 aa14.8□□□□□ -0.04
SNX1-208ENST00000559844 OR52L2PQ8NGH6 319 aa14.8□□□□□ -0.04
SNX1-208ENST00000559844 RNASE11Q8TAA1 199 aaKnown RBP14.8□□□□□ -0.04
SNX1-208ENST00000559844 FAM216AQ8WUB2 273 aa14.8□□□□□ -0.04
SNX1-208ENST00000559844 ARL11Q969Q4 196 aa14.8□□□□□ -0.04
SNX1-208ENST00000559844 C11orf1Q9H5F2 150 aa14.8□□□□□ -0.04
SNX1-208ENST00000559844 UBTD1Q9HAC8 227 aa14.8□□□□□ -0.04
SNX1-208ENST00000559844 HECTD1Q9ULT8 2610 aa14.8□□□□□ -0.04
SNX1-208ENST00000559844 KRBOX1C9JBD0 128 aa14.8□□□□□ -0.04
SNX1-208ENST00000559844 ZP3P21754 424 aa14.8□□□□□ -0.04
SNX1-208ENST00000559844 APOBEC3AP31941 199 aaPredicted RBP14.8□□□□□ -0.04
SNX1-208ENST00000559844 ID3Q02535 119 aa14.8□□□□□ -0.04
SNX1-208ENST00000559844 EDDM3AQ14507 147 aa14.8□□□□□ -0.04
SNX1-208ENST00000559844 SPRNQ5BIV9 151 aa14.8□□□□□ -0.04
SNX1-208ENST00000559844 OR2C3Q8N628 320 aa14.8□□□□□ -0.04
SNX1-208ENST00000559844 UBAC2Q8NBM4 344 aa14.8□□□□□ -0.04
SNX1-208ENST00000559844 Q8TCH9 128 aa14.8□□□□□ -0.04
SNX1-208ENST00000559844 SLC25A31Q9H0C2 315 aa14.8□□□□□ -0.04
SNX1-208ENST00000559844 PARP12Q9H0J9 701 aaKnown RBP14.8□□□□□ -0.04
SNX1-208ENST00000559844 NCOR1P1Q9H4R4 102 aa14.8□□□□□ -0.04
SNX1-208ENST00000559844 IGHV3OR15-7A0A075B7D8 119 aa14.79□□□□□ -0.04
SNX1-208ENST00000559844 CATR1Q13166 79 aa14.79□□□□□ -0.04
SNX1-208ENST00000559844 GPR146Q96CH1 333 aa14.79□□□□□ -0.04
SNX1-208ENST00000559844 OR2D2Q9H210 308 aa14.79□□□□□ -0.04
SNX1-208ENST00000559844 GCM1Q9NP62 436 aa14.79□□□□□ -0.04
SNX1-208ENST00000559844 ARFGEF3Q5TH69 2177 aa14.79□□□□□ -0.04
SNX1-208ENST00000559844 ODAMA1E959 279 aa14.78□□□□□ -0.04
SNX1-208ENST00000559844 NUDT19A8MXV4 375 aa14.78□□□□□ -0.04
SNX1-208ENST00000559844 K7N7A8 449 aa14.78□□□□□ -0.04
SNX1-208ENST00000559844 WRBO00258 174 aa14.78□□□□□ -0.04
SNX1-208ENST00000559844 ZNF16P17020 682 aaPredicted RBP14.78□□□□□ -0.04
SNX1-208ENST00000559844 POLR2GP62487 172 aaKnown RBP eCLIP14.78□□□□□ -0.04
SNX1-208ENST00000559844 CR1LQ2VPA4 569 aa14.78□□□□□ -0.04
SNX1-208ENST00000559844 ZNF561Q8N587 486 aa14.78□□□□□ -0.04
SNX1-208ENST00000559844 TPRX1Q8N7U7 411 aa14.78□□□□□ -0.04
SNX1-208ENST00000559844 SMIM3Q9BZL3 60 aa14.78□□□□□ -0.04
SNX1-208ENST00000559844 CACNA1DQ01668 2161 aa14.78□□□□□ -0.04
SNX1-208ENST00000559844 C15orf65H3BRN8 121 aa14.78□□□□□ -0.04
SNX1-208ENST00000559844 PITX3O75364 302 aa14.78□□□□□ -0.04
SNX1-208ENST00000559844 IRF2P14316 349 aa14.78□□□□□ -0.04
SNX1-208ENST00000559844 TNFRSF1AP19438 455 aa14.78□□□□□ -0.04
SNX1-208ENST00000559844 SSTR5P35346 364 aa14.78□□□□□ -0.04
SNX1-208ENST00000559844 CXorf66Q5JRM2 361 aaPredicted RBP14.78□□□□□ -0.04
SNX1-208ENST00000559844 MUC15Q8N387 334 aa14.78□□□□□ -0.04
SNX1-208ENST00000559844 SAT2Q96F10 170 aaPredicted RBP14.78□□□□□ -0.04
SNX1-208ENST00000559844 RAB9BQ9NP90 201 aa14.78□□□□□ -0.04
SNX1-208ENST00000559844 TAS2R3Q9NYW6 316 aa14.78□□□□□ -0.04
SNX1-208ENST00000559844 CHD3Q12873 2000 aaKnown RBP14.77□□□□□ -0.04
SNX1-208ENST00000559844 SSSCA1O60232 199 aa14.77□□□□□ -0.04
SNX1-208ENST00000559844 CD55P08174 381 aa14.77□□□□□ -0.04
SNX1-208ENST00000559844 FAM157CP0CG43 387 aa14.77□□□□□ -0.04
SNX1-208ENST00000559844 CD80P33681 288 aa14.77□□□□□ -0.04
SNX1-208ENST00000559844 EWSR1Q01844 656 aaKnown RBP eCLIP14.77□□□□□ -0.04
SNX1-208ENST00000559844 TCTEX1D1Q8N7M0 179 aa14.77□□□□□ -0.04
SNX1-208ENST00000559844 EDARADDQ8WWZ3 215 aa14.77□□□□□ -0.04
SNX1-208ENST00000559844 ARV1Q9H2C2 271 aa14.77□□□□□ -0.04
SNX1-208ENST00000559844 FAM212BQ9NTI7 297 aaPredicted RBP14.77□□□□□ -0.04
SNX1-208ENST00000559844 LYRM2Q9NU23 88 aaPredicted RBP14.77□□□□□ -0.04
SNX1-208ENST00000559844 OR6C3Q9NZP0 311 aa14.77□□□□□ -0.04
SNX1-208ENST00000559844 JPT1Q9UK76 154 aa14.77□□□□□ -0.04
SNX1-208ENST00000559844 IGKV1-39P01597 117 aa14.76□□□□□ -0.05
SNX1-208ENST00000559844 IGKV1D-39P04432 117 aa14.76□□□□□ -0.05
SNX1-208ENST00000559844 PPP1CCP36873 323 aaKnown RBP14.76□□□□□ -0.05
SNX1-208ENST00000559844 AKR1C2P52895 323 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms