RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 MPTX1A8MV57 137 aa11.79□□□□□ -0.52
RABGGTA-209ENST00000559551 F2RL2O00254 374 aa11.79□□□□□ -0.52
RABGGTA-209ENST00000559551 NDUFB3O43676 98 aa11.79□□□□□ -0.52
RABGGTA-209ENST00000559551 GZMHP20718 246 aa11.79□□□□□ -0.52
RABGGTA-209ENST00000559551 IL2RGP31785 369 aa11.79□□□□□ -0.52
RABGGTA-209ENST00000559551 HERV-K104P61576 105 aa11.79□□□□□ -0.52
RABGGTA-209ENST00000559551 LTC4SQ16873 150 aa11.79□□□□□ -0.52
RABGGTA-209ENST00000559551 TMEM128Q5BJH2 165 aa11.79□□□□□ -0.52
RABGGTA-209ENST00000559551 TMEM200BQ69YZ2 307 aa11.79□□□□□ -0.52
RABGGTA-209ENST00000559551 ZNF525Q8N782 197 aa11.79□□□□□ -0.52
RABGGTA-209ENST00000559551 OR10V1Q8NGI7 309 aa11.79□□□□□ -0.52
RABGGTA-209ENST00000559551 SECTM1Q8WVN6 248 aa11.79□□□□□ -0.52
RABGGTA-209ENST00000559551 CCL19Q99731 98 aa11.79□□□□□ -0.52
RABGGTA-209ENST00000559551 OR6C3Q9NZP0 311 aa11.79□□□□□ -0.52
RABGGTA-209ENST00000559551 WNK2Q9Y3S1 2297 aa11.78□□□□□ -0.52
RABGGTA-209ENST00000559551 HLA-AP01891 365 aaKnown RBP11.78□□□□□ -0.52
RABGGTA-209ENST00000559551 WNT2P09544 360 aa11.78□□□□□ -0.52
RABGGTA-209ENST00000559551 RPA2P15927 270 aa11.78□□□□□ -0.52
RABGGTA-209ENST00000559551 CCL3L1P16619 93 aa11.78□□□□□ -0.52
RABGGTA-209ENST00000559551 PIGPP57054 158 aa11.78□□□□□ -0.52
RABGGTA-209ENST00000559551 UBA52P62987 128 aaKnown RBP11.78□□□□□ -0.52
RABGGTA-209ENST00000559551 PHLDA2Q53GA4 152 aa11.78□□□□□ -0.52
RABGGTA-209ENST00000559551 FAHD2BQ6P2I3 314 aaPredicted RBP11.78□□□□□ -0.52
RABGGTA-209ENST00000559551 ZNF565Q8N9K5 539 aa11.78□□□□□ -0.52
RABGGTA-209ENST00000559551 FAHD2AQ96GK7 314 aa11.78□□□□□ -0.52
RABGGTA-209ENST00000559551 LINC00574Q9H8X3 128 aa11.78□□□□□ -0.52
RABGGTA-209ENST00000559551 SLC2A9Q9NRM0 540 aa11.78□□□□□ -0.52
RABGGTA-209ENST00000559551 KBTBD11-OT1A0A1B0GTJ5 212 aa11.77□□□□□ -0.52
RABGGTA-209ENST00000559551 CRYM-AS1A6NIL9 109 aa11.77□□□□□ -0.52
RABGGTA-209ENST00000559551 ECI1P42126 302 aa11.77□□□□□ -0.52
RABGGTA-209ENST00000559551 DLX6P56179 175 aa11.77□□□□□ -0.52
RABGGTA-209ENST00000559551 TMEM33P57088 247 aa11.77□□□□□ -0.52
RABGGTA-209ENST00000559551 RPL31P62899 125 aaKnown RBP11.77□□□□□ -0.52
RABGGTA-209ENST00000559551 HTD2P86397 168 aa11.77□□□□□ -0.52
RABGGTA-209ENST00000559551 TMEM155Q4W5P6 130 aa11.77□□□□□ -0.52
RABGGTA-209ENST00000559551 LRRC10Q5BKY1 277 aa11.77□□□□□ -0.52
RABGGTA-209ENST00000559551 HIST2H2BCQ6DN03 193 aa11.77□□□□□ -0.52
RABGGTA-209ENST00000559551 LIN54Q6MZP7 749 aa11.77□□□□□ -0.52
RABGGTA-209ENST00000559551 TRAT1Q6PIZ9 186 aa11.77□□□□□ -0.52
RABGGTA-209ENST00000559551 STPG2Q8N412 459 aa11.77□□□□□ -0.52
RABGGTA-209ENST00000559551 OR2AK2Q8NG84 335 aa11.77□□□□□ -0.52
RABGGTA-209ENST00000559551 MARC2Q969Z3 335 aa11.77□□□□□ -0.52
RABGGTA-209ENST00000559551 SLC5A7Q9GZV3 580 aa11.77□□□□□ -0.52
RABGGTA-209ENST00000559551 OR2S2Q9NQN1 319 aa11.77□□□□□ -0.52
RABGGTA-209ENST00000559551 CLN8Q9UBY8 286 aa11.77□□□□□ -0.52
RABGGTA-209ENST00000559551 TRGV10A0A0A0MS01 117 aa11.77□□□□□ -0.53
RABGGTA-209ENST00000559551 DNASE2O00115 360 aaPredicted RBP11.77□□□□□ -0.53
RABGGTA-209ENST00000559551 SPINT2O43291 252 aa11.77□□□□□ -0.53
RABGGTA-209ENST00000559551 HSPA12AO43301 675 aa11.77□□□□□ -0.53
RABGGTA-209ENST00000559551 SFT2D2O95562 160 aa11.77□□□□□ -0.53
RABGGTA-209ENST00000559551 ZNF134P52741 427 aa11.77□□□□□ -0.53
RABGGTA-209ENST00000559551 SLC9A3R2Q15599 337 aa11.77□□□□□ -0.53
RABGGTA-209ENST00000559551 ANKRD55Q3KP44 614 aa11.77□□□□□ -0.53
RABGGTA-209ENST00000559551 H1FXQ92522 213 aaKnown RBP11.77□□□□□ -0.53
RABGGTA-209ENST00000559551 RAB1CQ92928 201 aa11.77□□□□□ -0.53
RABGGTA-209ENST00000559551 SCGB3A2Q96PL1 93 aa11.77□□□□□ -0.53
RABGGTA-209ENST00000559551 PSMG3-AS1Q96PY0 264 aa11.77□□□□□ -0.53
RABGGTA-209ENST00000559551 C14orf166Q9Y224 244 aaKnown RBP11.77□□□□□ -0.53
RABGGTA-209ENST00000559551 LINC00312Q9Y6C7 94 aa11.77□□□□□ -0.53
RABGGTA-209ENST00000559551 F5H0A9 414 aaPredicted RBP11.76□□□□□ -0.53
RABGGTA-209ENST00000559551 HSD17B6O14756 317 aa11.76□□□□□ -0.53
RABGGTA-209ENST00000559551 IGHV3-7P01780 117 aa11.76□□□□□ -0.53
RABGGTA-209ENST00000559551 APOC3P02656 99 aa11.76□□□□□ -0.53
RABGGTA-209ENST00000559551 OR8U9P0C7N5 309 aa11.76□□□□□ -0.53
RABGGTA-209ENST00000559551 VAMP1P23763 118 aa11.76□□□□□ -0.53
RABGGTA-209ENST00000559551 TAS2R31P59538 309 aa11.76□□□□□ -0.53
RABGGTA-209ENST00000559551 C11orf42Q8N5U0 333 aa11.76□□□□□ -0.53
RABGGTA-209ENST00000559551 OR8U1Q8NH10 309 aa11.76□□□□□ -0.53
RABGGTA-209ENST00000559551 CASTOR1Q8WTX7 329 aa11.76□□□□□ -0.53
RABGGTA-209ENST00000559551 MITD1Q8WV92 249 aa11.76□□□□□ -0.53
RABGGTA-209ENST00000559551 LEAP2Q969E1 77 aa11.76□□□□□ -0.53
RABGGTA-209ENST00000559551 AGMATQ9BSE5 352 aa11.76□□□□□ -0.53
RABGGTA-209ENST00000559551 ZNF729A6NN14 1252 aaPredicted RBP11.75□□□□□ -0.53
RABGGTA-209ENST00000559551 GOSR2O14653 212 aa11.75□□□□□ -0.53
RABGGTA-209ENST00000559551 SLC31A2O15432 143 aa11.75□□□□□ -0.53
RABGGTA-209ENST00000559551 NUPL2O15504 423 aaKnown RBP11.75□□□□□ -0.53
RABGGTA-209ENST00000559551 SIX6O95475 246 aa11.75□□□□□ -0.53
RABGGTA-209ENST00000559551 MEF2CQ06413 473 aaPredicted RBP11.75□□□□□ -0.53
RABGGTA-209ENST00000559551 MORN2Q502X0 79 aa11.75□□□□□ -0.53
RABGGTA-209ENST00000559551 LY6G6FQ5SQ64 297 aa11.75□□□□□ -0.53
RABGGTA-209ENST00000559551 PRAMEF5Q5TYX0 476 aa11.75□□□□□ -0.53
RABGGTA-209ENST00000559551 WDR25Q64LD2 544 aaPredicted RBP11.75□□□□□ -0.53
RABGGTA-209ENST00000559551 C12orf45Q8N5I9 185 aaPredicted RBP11.75□□□□□ -0.53
RABGGTA-209ENST00000559551 RTN4IP1Q8WWV3 396 aaPredicted RBP11.75□□□□□ -0.53
RABGGTA-209ENST00000559551 MFFQ9GZY8 342 aa11.75□□□□□ -0.53
RABGGTA-209ENST00000559551 RNF150Q9ULK6 438 aa11.75□□□□□ -0.53
RABGGTA-209ENST00000559551 UBE2J1Q9Y385 318 aaPredicted RBP11.75□□□□□ -0.53
RABGGTA-209ENST00000559551 hADV38S2A0JD32 116 aa11.75□□□□□ -0.53
RABGGTA-209ENST00000559551 DBX1A6NMT0 343 aa11.75□□□□□ -0.53
RABGGTA-209ENST00000559551 PROP1O75360 226 aa11.75□□□□□ -0.53
RABGGTA-209ENST00000559551 DUS4LO95620 317 aaKnown RBP11.75□□□□□ -0.53
RABGGTA-209ENST00000559551 GPR6P46095 362 aaPredicted RBP11.75□□□□□ -0.53
RABGGTA-209ENST00000559551 H2BFSP57053 126 aa11.75□□□□□ -0.53
RABGGTA-209ENST00000559551 DCAF12L2Q5VW00 463 aa11.75□□□□□ -0.53
RABGGTA-209ENST00000559551 TIMD4Q96H15 378 aa11.75□□□□□ -0.53
RABGGTA-209ENST00000559551 PATZ1Q9HBE1 687 aaKnown RBP11.75□□□□□ -0.53
RABGGTA-209ENST00000559551 GFOD1Q9NXC2 390 aa11.75□□□□□ -0.53
RABGGTA-209ENST00000559551 JPT1Q9UK76 154 aa11.75□□□□□ -0.53
RABGGTA-209ENST00000559551 A0A0D9SG52 128 aa11.74□□□□□ -0.53
RABGGTA-209ENST00000559551 GPR31O00270 319 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms