RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 RABL2AQ9UBK7 228 aaPredicted RBP10.05□□□□□ -0.8
GABPB1-208ENST00000558970 ANAPC10Q9UM13 185 aa10.05□□□□□ -0.8
GABPB1-208ENST00000558970 RABL2BQ9UNT1 228 aa10.05□□□□□ -0.8
GABPB1-208ENST00000558970 FBN1P35555 2871 aaKnown RBP10.04□□□□□ -0.8
GABPB1-208ENST00000558970 IGHV3-72A0A0B4J1Y9 119 aa10.04□□□□□ -0.8
GABPB1-208ENST00000558970 IGKV1D-13A0A0B4J2D9 117 aa10.04□□□□□ -0.8
GABPB1-208ENST00000558970 LINC00854A0A1B0GVQ3 168 aa10.04□□□□□ -0.8
GABPB1-208ENST00000558970 CTDSPLO15194 276 aa10.04□□□□□ -0.8
GABPB1-208ENST00000558970 CTXN2P0C2S0 81 aa10.04□□□□□ -0.8
GABPB1-208ENST00000558970 IGKV1-13P0DP09 117 aa10.04□□□□□ -0.8
GABPB1-208ENST00000558970 NAT1P18440 290 aa10.04□□□□□ -0.8
GABPB1-208ENST00000558970 AADACP22760 399 aa10.04□□□□□ -0.8
GABPB1-208ENST00000558970 IL3RAP26951 378 aa10.04□□□□□ -0.8
GABPB1-208ENST00000558970 GPR12P47775 334 aa10.04□□□□□ -0.8
GABPB1-208ENST00000558970 TSPAN5P62079 268 aa10.04□□□□□ -0.8
GABPB1-208ENST00000558970 BAMBIQ13145 260 aa10.04□□□□□ -0.8
GABPB1-208ENST00000558970 LY6EQ16553 131 aa10.04□□□□□ -0.8
GABPB1-208ENST00000558970 Q3ZCU0 254 aa10.04□□□□□ -0.8
GABPB1-208ENST00000558970 RNASE10Q5GAN6 216 aaKnown RBP10.04□□□□□ -0.8
GABPB1-208ENST00000558970 MINOS1Q5TGZ0 78 aa10.04□□□□□ -0.8
GABPB1-208ENST00000558970 MOB3BQ86TA1 216 aa10.04□□□□□ -0.8
GABPB1-208ENST00000558970 LDLRAD3Q86YD5 345 aa10.04□□□□□ -0.8
GABPB1-208ENST00000558970 ODF3L1Q8IXM7 274 aa10.04□□□□□ -0.8
GABPB1-208ENST00000558970 OR4D10Q8NGI6 311 aa10.04□□□□□ -0.8
GABPB1-208ENST00000558970 SECTM1Q8WVN6 248 aa10.04□□□□□ -0.8
GABPB1-208ENST00000558970 SSX3Q99909 188 aa10.04□□□□□ -0.8
GABPB1-208ENST00000558970 ZNF2Q9BSG1 426 aaPredicted RBP10.04□□□□□ -0.8
GABPB1-208ENST00000558970 THAP7Q9BT49 309 aaPredicted RBP10.04□□□□□ -0.8
GABPB1-208ENST00000558970 AKIP1Q9NQ31 210 aa10.04□□□□□ -0.8
GABPB1-208ENST00000558970 MINOS1-NBL1R4GNA1 71 aa10.04□□□□□ -0.8
GABPB1-208ENST00000558970 NBEAL1Q6ZS30 2694 aa10.04□□□□□ -0.8
GABPB1-208ENST00000558970 DNAJC9-AS1A6NH13 148 aa10.03□□□□□ -0.8
GABPB1-208ENST00000558970 H3BUX3 64 aa10.03□□□□□ -0.8
GABPB1-208ENST00000558970 GSTZ1O43708 216 aaPredicted RBP10.03□□□□□ -0.8
GABPB1-208ENST00000558970 TPPPO94811 219 aa10.03□□□□□ -0.8
GABPB1-208ENST00000558970 DIRAS3O95661 229 aa10.03□□□□□ -0.8
GABPB1-208ENST00000558970 IFNA6P05013 189 aa10.03□□□□□ -0.8
GABPB1-208ENST00000558970 CSF1P09603 554 aa10.03□□□□□ -0.8
GABPB1-208ENST00000558970 ETV6P41212 452 aa10.03□□□□□ -0.8
GABPB1-208ENST00000558970 INPP1P49441 399 aa10.03□□□□□ -0.8
GABPB1-208ENST00000558970 RAB7AP51149 207 aa10.03□□□□□ -0.8
GABPB1-208ENST00000558970 TAS2R19P59542 299 aa10.03□□□□□ -0.8
GABPB1-208ENST00000558970 HERV-K104P61576 105 aa10.03□□□□□ -0.8
GABPB1-208ENST00000558970 BAK1Q16611 211 aa10.03□□□□□ -0.8
GABPB1-208ENST00000558970 SCGB2B2Q4G0G5 96 aa10.03□□□□□ -0.8
GABPB1-208ENST00000558970 TRIQKQ629K1 86 aa10.03□□□□□ -0.8
GABPB1-208ENST00000558970 ZNF57Q68EA5 555 aaPredicted RBP10.03□□□□□ -0.8
GABPB1-208ENST00000558970 STEAP1BQ6NZ63 245 aa10.03□□□□□ -0.8
GABPB1-208ENST00000558970 GLDNQ6ZMI3 551 aaPredicted RBP10.03□□□□□ -0.8
GABPB1-208ENST00000558970 TGIF2LXQ8IUE1 241 aa10.03□□□□□ -0.8
GABPB1-208ENST00000558970 MFSD4AQ8N468 514 aa10.03□□□□□ -0.8
GABPB1-208ENST00000558970 LINC00311Q8N616 119 aa10.03□□□□□ -0.8
GABPB1-208ENST00000558970 DRAXINQ8NBI3 349 aaPredicted RBP10.03□□□□□ -0.8
GABPB1-208ENST00000558970 OR56B4Q8NH76 319 aa10.03□□□□□ -0.8
GABPB1-208ENST00000558970 MALSU1Q96EH3 234 aa10.03□□□□□ -0.8
GABPB1-208ENST00000558970 ABCB10Q9NRK6 738 aa10.03□□□□□ -0.8
GABPB1-208ENST00000558970 ZNF221Q9UK13 617 aa10.03□□□□□ -0.8
GABPB1-208ENST00000558970 OR2W1Q9Y3N9 320 aa10.03□□□□□ -0.8
GABPB1-208ENST00000558970 IGHV1-3A0A0C4DH29 117 aa10.02□□□□□ -0.81
GABPB1-208ENST00000558970 LY6LH3BQJ8 138 aa10.02□□□□□ -0.81
GABPB1-208ENST00000558970 TIMM23O14925 209 aa10.02□□□□□ -0.81
GABPB1-208ENST00000558970 RAB3DO95716 219 aa10.02□□□□□ -0.81
GABPB1-208ENST00000558970 PPYP01298 95 aa10.02□□□□□ -0.81
GABPB1-208ENST00000558970 GAPDHP04406 335 aaKnown RBP10.02□□□□□ -0.81
GABPB1-208ENST00000558970 AMY2AP04746 511 aa10.02□□□□□ -0.81
GABPB1-208ENST00000558970 LUMP51884 338 aaPredicted RBP10.02□□□□□ -0.81
GABPB1-208ENST00000558970 PPP5CP53041 499 aa10.02□□□□□ -0.81
GABPB1-208ENST00000558970 LINC00205P59089 165 aa10.02□□□□□ -0.81
GABPB1-208ENST00000558970 DYRK1AQ13627 763 aa10.02□□□□□ -0.81
GABPB1-208ENST00000558970 LRRC75BQ2VPJ9 315 aa10.02□□□□□ -0.81
GABPB1-208ENST00000558970 FBLN7Q53RD9 439 aa10.02□□□□□ -0.81
GABPB1-208ENST00000558970 Q6YL49 198 aa10.02□□□□□ -0.81
GABPB1-208ENST00000558970 OVCH2Q7RTZ1 564 aa10.02□□□□□ -0.81
GABPB1-208ENST00000558970 TMEM219Q86XT9 240 aa10.02□□□□□ -0.81
GABPB1-208ENST00000558970 DRAM1Q8N682 238 aa10.02□□□□□ -0.81
GABPB1-208ENST00000558970 C8orf31Q8N9H6 132 aa10.02□□□□□ -0.81
GABPB1-208ENST00000558970 TMEM229BQ8NBD8 167 aa10.02□□□□□ -0.81
GABPB1-208ENST00000558970 OR4C16Q8NGL9 310 aa10.02□□□□□ -0.81
GABPB1-208ENST00000558970 RTN4IP1Q8WWV3 396 aaPredicted RBP10.02□□□□□ -0.81
GABPB1-208ENST00000558970 TRIM63Q969Q1 353 aa10.02□□□□□ -0.81
GABPB1-208ENST00000558970 C5orf30Q96GV9 206 aa10.02□□□□□ -0.81
GABPB1-208ENST00000558970 GPHA2Q96T91 129 aa10.02□□□□□ -0.81
GABPB1-208ENST00000558970 S1PR3Q99500 378 aa10.02□□□□□ -0.81
GABPB1-208ENST00000558970 SDHCQ99643 169 aaPredicted RBP10.02□□□□□ -0.81
GABPB1-208ENST00000558970 AGMATQ9BSE5 352 aa10.02□□□□□ -0.81
GABPB1-208ENST00000558970 MRPL20Q9BYC9 149 aaKnown RBP10.02□□□□□ -0.81
GABPB1-208ENST00000558970 ESM1Q9NQ30 184 aa10.02□□□□□ -0.81
GABPB1-208ENST00000558970 PIPOXQ9P0Z9 390 aa10.02□□□□□ -0.81
GABPB1-208ENST00000558970 A0A1W2PPI3 338 aa10.01□□□□□ -0.81
GABPB1-208ENST00000558970 ANKRD20A5PA0PJZ0 165 aa10.01□□□□□ -0.81
GABPB1-208ENST00000558970 BTBD17A6NE02 478 aa10.01□□□□□ -0.81
GABPB1-208ENST00000558970 M0R1X1 148 aa10.01□□□□□ -0.81
GABPB1-208ENST00000558970 RAB29O14966 203 aa10.01□□□□□ -0.81
GABPB1-208ENST00000558970 TNFSF12O43508 249 aa10.01□□□□□ -0.81
GABPB1-208ENST00000558970 TCF21O43680 179 aa10.01□□□□□ -0.81
GABPB1-208ENST00000558970 TUSC2O75896 110 aa10.01□□□□□ -0.81
GABPB1-208ENST00000558970 VENTXO95231 258 aa10.01□□□□□ -0.81
GABPB1-208ENST00000558970 AKAIN1P0CW23 69 aa10.01□□□□□ -0.81
GABPB1-208ENST00000558970 PTBP1P26599 531 aaKnown RBP eCLIP10.01□□□□□ -0.812e-8■■■■□ 24.2
GABPB1-208ENST00000558970 IER3P46695 156 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms