RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 CEACAM6P40199 344 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 PMELP40967 661 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 ZNF83P51522 516 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 ZNF134P52741 427 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 PPP1CBP62140 327 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 BSPH1Q075Z2 132 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 SNAI3Q3KNW1 292 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 LRRC37A5PQ49AS3 106 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 GCSAMLQ5JQS6 135 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 UBE2NLQ5JXB2 153 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 TMED4Q7Z7H5 227 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 TBC1D26Q86UD7 250 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 LRRTM1Q86UE6 522 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 HAPLN4Q86UW8 402 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 LYPD6Q86Y78 171 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 FTMTQ8N4E7 242 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 JAGN1Q8N5M9 183 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 GPR148Q8TDV2 347 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 NPRL2Q8WTW4 380 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 SMIM4Q8WVI0 70 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 PTH2Q96A98 100 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 ZC3HAV1LQ96H79 300 aaKnown RBP3.42□□□□□ -1.86
ZEB1-212ENST00000558655 GINS4Q9BRT9 223 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 COMMD4Q9H0A8 199 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 ZNF230Q9UIE0 474 aaPredicted RBP3.42□□□□□ -1.86
ZEB1-212ENST00000558655 NOP16Q9Y3C1 178 aaKnown RBP3.42□□□□□ -1.86
ZEB1-212ENST00000558655 RP1L1Q8IWN7 2480 aaPredicted RBP3.42□□□□□ -1.86
ZEB1-212ENST00000558655 ANKHD1Q8IWZ3 2542 aaKnown RBP3.42□□□□□ -1.86
ZEB1-212ENST00000558655 ITPR3Q14573 2671 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 ARFGEF3Q5TH69 2177 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 PPIAL4EA0A075B759 164 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 LOC100289279A0A1B0GTE1 492 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 A0A1B0GVI7 797 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.42□□□□□ -1.86
ZEB1-212ENST00000558655 LOC107986453A0A1B0GWG9 222 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 A1L4Q6 167 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 M0R1B8 84 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 SULT1C2O00338 296 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 PPP1R2P9O14990 202 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 FCN3O75636 299 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 CD3DP04234 171 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 PPIAL4FP0DN26 164 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 RPL35P42766 123 aaKnown RBP3.42□□□□□ -1.86
ZEB1-212ENST00000558655 PLP1P60201 277 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 NUTF2P61970 127 aaKnown RBP3.42□□□□□ -1.86
ZEB1-212ENST00000558655 ZNF92Q03936 586 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 ATXN7L3Q14CW9 347 aaPredicted RBP3.42□□□□□ -1.86
ZEB1-212ENST00000558655 Q499Y3 187 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 ZNF672Q499Z4 452 aaPredicted RBP3.42□□□□□ -1.86
ZEB1-212ENST00000558655 PRR31Q5SQ13 230 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 C11orf71Q6IPW1 123 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 FAM57BQ71RH2 274 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 DTX2Q86UW9 622 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 WFDC8Q8IUA0 241 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 ZNF101Q8IZC7 436 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 OR51S1Q8NGJ8 323 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 OR10K1Q8NGX5 313 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 PP6455Q8WZ26 134 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 MRPL24Q96A35 216 aaKnown RBP3.42□□□□□ -1.86
ZEB1-212ENST00000558655 R3HDM4Q96D70 268 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 MRPL53Q96EL3 112 aaKnown RBP3.42□□□□□ -1.86
ZEB1-212ENST00000558655 REEP6Q96HR9 211 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 ELOVL1Q9BW60 279 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 TLNRD1Q9H1K6 362 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 ATG5Q9H1Y0 275 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 SEBOXQ9HB31 216 aaPredicted RBP3.42□□□□□ -1.86
ZEB1-212ENST00000558655 GPR84Q9NQS5 396 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 PPIAL4AQ9Y536 164 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 CACNA1DQ01668 2161 aa3.42□□□□□ -1.86
ZEB1-212ENST00000558655 FXYD6-FXYD2A0A087WZ82 144 aa3.41□□□□□ -1.86
ZEB1-212ENST00000558655 A0A1W2PPE3 182 aa3.41□□□□□ -1.86
ZEB1-212ENST00000558655 RNF222A6NCQ9 220 aa3.41□□□□□ -1.86
ZEB1-212ENST00000558655 TMEM235A6NFC5 223 aa3.41□□□□□ -1.86
ZEB1-212ENST00000558655 DISC1C4P0D8 188 aa3.41□□□□□ -1.86
ZEB1-212ENST00000558655 E7EQL1 145 aa3.41□□□□□ -1.86
ZEB1-212ENST00000558655 F5H5K5 113 aa3.41□□□□□ -1.86
ZEB1-212ENST00000558655 K7EN84 100 aa3.41□□□□□ -1.86
ZEB1-212ENST00000558655 FSTL3O95633 263 aa3.41□□□□□ -1.86
ZEB1-212ENST00000558655 GTF2F2P13984 249 aa3.41□□□□□ -1.86
ZEB1-212ENST00000558655 PPOXP50336 477 aa3.41□□□□□ -1.86
ZEB1-212ENST00000558655 PRKXP51817 358 aa3.41□□□□□ -1.86
ZEB1-212ENST00000558655 EXOSC2Q13868 293 aaKnown RBP3.41□□□□□ -1.86
ZEB1-212ENST00000558655 GRK1Q15835 563 aa3.41□□□□□ -1.86
ZEB1-212ENST00000558655 ZNF718Q3SXZ3 478 aa3.41□□□□□ -1.86
ZEB1-212ENST00000558655 SCGB2B2Q4G0G5 96 aa3.41□□□□□ -1.86
ZEB1-212ENST00000558655 FAM90A2PQ658T7 463 aa3.41□□□□□ -1.86
ZEB1-212ENST00000558655 OLFML2AQ68BL7 652 aa3.41□□□□□ -1.86
ZEB1-212ENST00000558655 CCDC144NLQ6NUI1 221 aa3.41□□□□□ -1.86
ZEB1-212ENST00000558655 ALKAL2Q6UX46 152 aa3.41□□□□□ -1.86
ZEB1-212ENST00000558655 ZNF782Q6ZMW2 699 aaPredicted RBP3.41□□□□□ -1.86
ZEB1-212ENST00000558655 NAA40Q86UY6 237 aa3.41□□□□□ -1.86
ZEB1-212ENST00000558655 COMMD2Q86X83 199 aa3.41□□□□□ -1.86
ZEB1-212ENST00000558655 GVQW1Q8N7I0 195 aa3.41□□□□□ -1.86
ZEB1-212ENST00000558655 ZNF611Q8N823 705 aa3.41□□□□□ -1.86
ZEB1-212ENST00000558655 POC1AQ8NBT0 407 aa3.41□□□□□ -1.86
ZEB1-212ENST00000558655 PXT1Q8NFP0 134 aa3.41□□□□□ -1.86
ZEB1-212ENST00000558655 OR4C16Q8NGL9 310 aa3.41□□□□□ -1.86
ZEB1-212ENST00000558655 LINC01560Q8TB33 94 aa3.41□□□□□ -1.86
ZEB1-212ENST00000558655 SLC25A40Q8TBP6 338 aa3.41□□□□□ -1.86
ZEB1-212ENST00000558655 FCAMRQ8WWV6 532 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms