RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 H0YIZ8 118 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 MSTNO14793 375 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 PRKNO60260 465 aaPredicted RBP4.73□□□□□ -1.65
GABPB1-207ENST00000558335 LMX1BO60663 402 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 C1QL1O75973 258 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 TRGC2P03986 189 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 HSPB1P04792 205 aaKnown RBP4.73□□□□□ -1.65
GABPB1-207ENST00000558335 C1QTNF9P0C862 333 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 ZNF705DP0CH99 300 aaPredicted RBP4.73□□□□□ -1.65
GABPB1-207ENST00000558335 ZNF705BP0CI00 300 aaPredicted RBP4.73□□□□□ -1.65
GABPB1-207ENST00000558335 CEACAM1P13688 526 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 KITLGP21583 273 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 VDAC1P21796 283 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 SDHBP21912 280 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 CRYGSP22914 178 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 FOLR3P41439 243 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 NKX2-1P43699 371 aaPredicted RBP4.73□□□□□ -1.65
GABPB1-207ENST00000558335 RBM11P57052 281 aaKnown RBP4.73□□□□□ -1.65
GABPB1-207ENST00000558335 FAM3BP58499 235 aaPredicted RBP4.73□□□□□ -1.65
GABPB1-207ENST00000558335 TAS2R30P59541 319 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 HBG1P69891 147 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 HBG2P69892 147 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 RUNX1Q01196 453 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 PLP2Q04941 152 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 GAGE5Q13069 117 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 GAGE6Q13070 117 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 ENDOGQ14249 297 aaKnown RBP4.73□□□□□ -1.65
GABPB1-207ENST00000558335 MIDNQ504T8 468 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 LYSMD4Q5XG99 296 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 AAED1Q7RTV5 226 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 S100A7AQ86SG5 101 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 RTN4RL2Q86UN3 420 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 Q8IYB0 196 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 SLC25A45Q8N413 288 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 OR2C3Q8N628 320 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 OR5AU1Q8NGC0 362 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 OR2Y1Q8NGV0 311 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 ABHD5Q8WTS1 349 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 FRZBQ92765 325 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 CLDN23Q96B33 292 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 ZNF524Q96C55 264 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 IP6K3Q96PC2 410 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 RAB40CQ96S21 281 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 P2RX4Q99571 388 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 CHRDL1Q9BU40 450 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 FOXQ1Q9C009 403 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 TMEM222Q9H0R3 208 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 ZNF442Q9H7R0 627 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 CLN8Q9UBY8 286 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 BOKQ9UMX3 212 aaPredicted RBP4.73□□□□□ -1.65
GABPB1-207ENST00000558335 POLR3KQ9Y2Y1 108 aaPredicted RBP4.73□□□□□ -1.65
GABPB1-207ENST00000558335 MSRB2Q9Y3D2 182 aa4.73□□□□□ -1.65
GABPB1-207ENST00000558335 F5P12259 2224 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 HTTP42858 3142 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 TRBV6-6A0A0A6YYG2 114 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 TRAV1-1A0A0B4J248 108 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 IGHV5-10-1A0A0J9YXX1 117 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 A0A1B0GU03 582 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 A0A1W2PNR3 127 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 IGSF23A1L1A6 192 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 C1QTNF9BB2RNN3 333 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 ZNF732B4DXR9 585 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 B9A039 149 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 FAM90A26D6RGX4 464 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 F8WDY8 70 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 H0Y980 276 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 SDCBPO00560 298 aaPredicted RBP4.72□□□□□ -1.65
GABPB1-207ENST00000558335 DEGS1O15121 323 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 MPPED1O15442 326 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 SYNGR3O43761 229 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 EFNA2O43921 213 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 SCGB2A1O75556 95 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 DKK1O94907 266 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 NDUFB8O95169 186 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 ZNF205O95201 554 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 CER1O95813 267 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 TYMSP04818 313 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 OR4A8P0C604 315 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 CDAP32320 146 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 LPAR6P43657 344 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 MLF1P58340 268 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 HERV-K104P63124 156 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 SERF2P84101 59 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 SRSF3P84103 164 aaKnown RBP4.72□□□□□ -1.65
GABPB1-207ENST00000558335 CFHR1Q03591 330 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 PMS2P11Q13670 270 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 PCOLCEQ15113 449 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 MSMO1Q15800 293 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 KRTAP27-1Q3LI81 207 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 TPTE2P1Q5T6R2 138 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 PTCRAQ6ISU1 281 aaPredicted RBP4.72□□□□□ -1.65
GABPB1-207ENST00000558335 CCDC144NLQ6NUI1 221 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 TRAT1Q6PIZ9 186 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 LCNL1Q6ZST4 164 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 C6orf201Q7Z4U5 140 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 UBALD2Q8IYN6 164 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 SHISA5Q8N114 240 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 ZBTB34Q8NCN2 500 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 OR5D13Q8NGL4 314 aa4.72□□□□□ -1.65
GABPB1-207ENST00000558335 SCGB1C1Q8TD33 95 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms