RNA–Protein interactions for RNA: ENST00000558080.1

SPG11-205, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 1 (best)

Gene SPG11, Length 759 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-205ENST00000558080 ZNF286AQ9HBT8 521 aa6.05□□□□□ -1.44
SPG11-205ENST00000558080 SERTAD4Q9NUC0 356 aa6.05□□□□□ -1.44
SPG11-205ENST00000558080 TAS2R3Q9NYW6 316 aa6.05□□□□□ -1.44
SPG11-205ENST00000558080 COPZ2Q9P299 210 aa6.05□□□□□ -1.44
SPG11-205ENST00000558080 DPM3Q9P2X0 92 aa6.05□□□□□ -1.44
SPG11-205ENST00000558080 ING4Q9UNL4 249 aa6.05□□□□□ -1.44
SPG11-205ENST00000558080 MINOS1-NBL1R4GNA1 71 aa6.05□□□□□ -1.44
SPG11-205ENST00000558080 TRAV39A0A0B4J263 110 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 TRAV24A0A0B4J272 114 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 ANKRD20A5PA0PJZ0 165 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 ZNF729A6NN14 1252 aaPredicted RBP6.04□□□□□ -1.44
SPG11-205ENST00000558080 NUDT19A8MXV4 375 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 TOR1AO14656 332 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 PEX14O75381 377 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 IGHV3-7P01780 117 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 CD28P10747 220 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 SLC6A1P30531 599 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 PTGFRP43088 359 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 OR3A4PP47883 348 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 DYNLT3P51808 116 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 PRRX1P54821 245 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 ACTBP60709 375 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 UNC119Q13432 240 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 RBM39Q14498 530 aaKnown RBP6.04□□□□□ -1.44
SPG11-205ENST00000558080 RSU1Q15404 277 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 LTC4SQ16873 150 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 TMEM95Q3KNT9 176 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 PIGYQ3MUY2 71 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 UTF1Q5T230 341 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 RSBN1Q5VWQ0 802 aaPredicted RBP6.04□□□□□ -1.44
SPG11-205ENST00000558080 RTN4RL2Q86UN3 420 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 CADM3Q8N126 398 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 Q8N2B8 174 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 CHST4Q8NCG5 386 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 PXT1Q8NFP0 134 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 CHAC2Q8WUX2 184 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 LEAP2Q969E1 77 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 CREB3L1Q96BA8 519 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 URM1Q9BTM9 101 aaKnown RBP6.04□□□□□ -1.44
SPG11-205ENST00000558080 TMEM59Q9BXS4 323 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 MMP28Q9H239 520 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 ZNF581Q9P0T4 197 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 MTFP1Q9UDX5 166 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 KIF25Q9UIL4 384 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 NUBP2Q9Y5Y2 271 aa6.04□□□□□ -1.44
SPG11-205ENST00000558080 MEIKINA0A087WXM9 373 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 KBTBD11-OT1A0A1B0GTJ5 212 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 SH2D7A6NKC9 451 aaPredicted RBP6.03□□□□□ -1.44
SPG11-205ENST00000558080 FAM90A22PA8MWA6 464 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 LEUTXA8MZ59 168 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 BUB1B-PAK6H3BSN5 160 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 H3BUI4 141 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 ZNF780AO75290 641 aaPredicted RBP6.03□□□□□ -1.44
SPG11-205ENST00000558080 CRTAPO75718 401 aaPredicted RBP6.03□□□□□ -1.44
SPG11-205ENST00000558080 MPIG6BO95866 241 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 IGLV1-47P01700 117 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 CSN2P05814 226 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 LPLP06858 475 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 HNRNPCP07910 306 aaKnown RBP eCLIP6.03□□□□□ -1.44
SPG11-205ENST00000558080 TRAPPC2P0DI81 140 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 TRAPPC2BP0DI82 140 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 CGB3P0DN86 165 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 CGB7P0DN87 165 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 CD34P28906 385 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 BRS3P32247 399 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 BTCP35070 178 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 GLP1RP43220 463 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 VDAC2P45880 294 aaPredicted RBP6.03□□□□□ -1.44
SPG11-205ENST00000558080 ARL6IP1Q15041 203 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 C17orf58Q2M2W7 97 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 TPTE2P1Q5T6R2 138 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 ELP2Q6IA86 826 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 OR10K2Q6IF99 312 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 ASCL4Q6XD76 172 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 OR56B1Q8NGI3 324 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 OR51T1Q8NGJ9 327 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 OR13A1Q8NGR1 328 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 OR10R2Q8NGX6 335 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 RFESDQ8TAC1 157 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 PLPPR1Q8TBJ4 325 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 ZNF596Q8TC21 504 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 MRGPRDQ8TDS7 321 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 GPX8Q8TED1 209 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 CAPSLQ8WWF8 208 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 MARVELD1Q9BSK0 173 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 METTL9Q9H1A3 318 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 LPAR5Q9H1C0 372 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 HRASLSQ9HDD0 168 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 PCDHB16Q9NRJ7 776 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 CALYQ9NYX4 217 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 OR6C3Q9NZP0 311 aa6.03□□□□□ -1.44
SPG11-205ENST00000558080 ZNF107Q9UII5 783 aaPredicted RBP6.03□□□□□ -1.44
SPG11-205ENST00000558080 A0A1W2PRX2 142 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 INMT-MINDY4F8WBC2 141 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 G3V4G9 280 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 LY6LH3BQJ8 138 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 RAB27BO00194 218 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 DHFRP00374 187 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 MT-ND4P03905 459 aa6.02□□□□□ -1.45
SPG11-205ENST00000558080 CSTBP04080 98 aaKnown RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms