RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 C8orf31Q8N9H6 132 aa13.28□□□□□ -0.28
NEK9-211ENST00000557673 ZNF439Q8NDP4 499 aa13.28□□□□□ -0.28
NEK9-211ENST00000557673 OR10V1Q8NGI7 309 aa13.28□□□□□ -0.28
NEK9-211ENST00000557673 MAFIPQ8WZ33 124 aa13.28□□□□□ -0.28
NEK9-211ENST00000557673 GALMQ96C23 342 aa13.28□□□□□ -0.28
NEK9-211ENST00000557673 ZNF230Q9UIE0 474 aaPredicted RBP13.28□□□□□ -0.28
NEK9-211ENST00000557673 TRDCB7Z8K6 153 aa13.27□□□□□ -0.29
NEK9-211ENST00000557673 TOR1AO14656 332 aa13.27□□□□□ -0.29
NEK9-211ENST00000557673 PF4V1P10720 104 aa13.27□□□□□ -0.29
NEK9-211ENST00000557673 PPP1CCP36873 323 aaKnown RBP13.27□□□□□ -0.29
NEK9-211ENST00000557673 KIR2DS1Q14954 304 aa13.27□□□□□ -0.29
NEK9-211ENST00000557673 SRSF7Q16629 238 aaKnown RBP eCLIP13.27□□□□□ -0.29
NEK9-211ENST00000557673 LAX1Q8IWV1 398 aa13.27□□□□□ -0.29
NEK9-211ENST00000557673 OR52L2PQ8NGH6 319 aa13.27□□□□□ -0.29
NEK9-211ENST00000557673 IL1F10Q8WWZ1 152 aa13.27□□□□□ -0.29
NEK9-211ENST00000557673 DCUN1D5Q9BTE7 237 aa13.27□□□□□ -0.29
NEK9-211ENST00000557673 CABLES2Q9BTV7 478 aa13.27□□□□□ -0.29
NEK9-211ENST00000557673 MIXL1Q9H2W2 232 aa13.27□□□□□ -0.29
NEK9-211ENST00000557673 OR2S2Q9NQN1 319 aa13.27□□□□□ -0.29
NEK9-211ENST00000557673 AMMECR1Q9Y4X0 333 aaPredicted RBP13.27□□□□□ -0.29
NEK9-211ENST00000557673 RYR3Q15413 4870 aa13.27□□□□□ -0.29
NEK9-211ENST00000557673 DNAH3Q8TD57 4116 aa13.26□□□□□ -0.29
NEK9-211ENST00000557673 IGKV1-6A0A0C4DH72 117 aa13.26□□□□□ -0.29
NEK9-211ENST00000557673 DPPA5A6NC42 116 aa13.26□□□□□ -0.29
NEK9-211ENST00000557673 SLC31A2O15432 143 aa13.26□□□□□ -0.29
NEK9-211ENST00000557673 FABP7O15540 132 aa13.26□□□□□ -0.29
NEK9-211ENST00000557673 SCTP09683 121 aa13.26□□□□□ -0.29
NEK9-211ENST00000557673 PTHLHP12272 177 aa13.26□□□□□ -0.29
NEK9-211ENST00000557673 IGLL1P15814 213 aa13.26□□□□□ -0.29
NEK9-211ENST00000557673 MNDAP41218 407 aa13.26□□□□□ -0.29
NEK9-211ENST00000557673 PRRX1P54821 245 aa13.26□□□□□ -0.29
NEK9-211ENST00000557673 LINC00311Q8N616 119 aa13.26□□□□□ -0.29
NEK9-211ENST00000557673 OR4A4PQ8NGN8 299 aa13.26□□□□□ -0.29
NEK9-211ENST00000557673 NXF2Q9GZY0 626 aaKnown RBP13.26□□□□□ -0.29
NEK9-211ENST00000557673 OR1A1Q9P1Q5 309 aa13.26□□□□□ -0.29
NEK9-211ENST00000557673 DPM3Q9P2X0 92 aa13.26□□□□□ -0.29
NEK9-211ENST00000557673 IGKV1D-8A0A087WSZ0 117 aa13.25□□□□□ -0.29
NEK9-211ENST00000557673 A0A1W2PPE3 182 aa13.25□□□□□ -0.29
NEK9-211ENST00000557673 FAM25AB3EWG3 89 aa13.25□□□□□ -0.29
NEK9-211ENST00000557673 FAM25CB3EWG5 89 aa13.25□□□□□ -0.29
NEK9-211ENST00000557673 FAM25GB3EWG6 89 aa13.25□□□□□ -0.29
NEK9-211ENST00000557673 BUB1B-PAK6H3BSN5 160 aa13.25□□□□□ -0.29
NEK9-211ENST00000557673 YPEL1O60688 119 aa13.25□□□□□ -0.29
NEK9-211ENST00000557673 DUS4LO95620 317 aaKnown RBP13.25□□□□□ -0.29
NEK9-211ENST00000557673 DIRAS3O95661 229 aa13.25□□□□□ -0.29
NEK9-211ENST00000557673 CD83Q01151 205 aa13.25□□□□□ -0.29
NEK9-211ENST00000557673 MORN2Q502X0 79 aa13.25□□□□□ -0.29
NEK9-211ENST00000557673 LY6G6FQ5SQ64 297 aa13.25□□□□□ -0.29
NEK9-211ENST00000557673 TPTE2P1Q5T6R2 138 aa13.25□□□□□ -0.29
NEK9-211ENST00000557673 SLC25A48Q6ZT89 311 aaKnown RBP13.25□□□□□ -0.29
NEK9-211ENST00000557673 OR5AU1Q8NGC0 362 aa13.25□□□□□ -0.29
NEK9-211ENST00000557673 OR10X1Q8NGY0 326 aa13.25□□□□□ -0.29
NEK9-211ENST00000557673 CREB3L1Q96BA8 519 aa13.25□□□□□ -0.29
NEK9-211ENST00000557673 YPEL2Q96QA6 119 aa13.25□□□□□ -0.29
NEK9-211ENST00000557673 ABHD14AQ9BUJ0 271 aa13.25□□□□□ -0.29
NEK9-211ENST00000557673 C6orf62Q9GZU0 229 aaPredicted RBP13.25□□□□□ -0.29
NEK9-211ENST00000557673 NDUFA13Q9P0J0 144 aa13.25□□□□□ -0.29
NEK9-211ENST00000557673 SLC23A1Q9UHI7 598 aa13.25□□□□□ -0.29
NEK9-211ENST00000557673 A0A1W2PRX2 142 aa13.24□□□□□ -0.29
NEK9-211ENST00000557673 LEUTXA8MZ59 168 aa13.24□□□□□ -0.29
NEK9-211ENST00000557673 LY6LH3BQJ8 138 aa13.24□□□□□ -0.29
NEK9-211ENST00000557673 CTDSP2O14595 271 aa13.24□□□□□ -0.29
NEK9-211ENST00000557673 RGS5O15539 181 aa13.24□□□□□ -0.29
NEK9-211ENST00000557673 RGS11O94810 467 aa13.24□□□□□ -0.29
NEK9-211ENST00000557673 PF4P02776 101 aa13.24□□□□□ -0.29
NEK9-211ENST00000557673 CD24P25063 80 aa13.24□□□□□ -0.29
NEK9-211ENST00000557673 CEACAM3P40198 252 aa13.24□□□□□ -0.29
NEK9-211ENST00000557673 BLCAPP62952 87 aa13.24□□□□□ -0.29
NEK9-211ENST00000557673 MADCAM1Q13477 382 aa13.24□□□□□ -0.29
NEK9-211ENST00000557673 DEFB121Q5J5C9 76 aa13.24□□□□□ -0.29
NEK9-211ENST00000557673 RCC1LQ96I51 464 aaKnown RBP13.24□□□□□ -0.29
NEK9-211ENST00000557673 AKR1E2Q96JD6 320 aa13.24□□□□□ -0.29
NEK9-211ENST00000557673 OCSTAMPQ9BR26 566 aa13.24□□□□□ -0.29
NEK9-211ENST00000557673 PARP12Q9H0J9 701 aaKnown RBP13.24□□□□□ -0.29
NEK9-211ENST00000557673 EXTL2Q9UBQ6 330 aa13.24□□□□□ -0.29
NEK9-211ENST00000557673 ADAM30Q9UKF2 790 aa13.24□□□□□ -0.29
NEK9-211ENST00000557673 HLA-DQB1P01920 261 aa13.23□□□□□ -0.29
NEK9-211ENST00000557673 GSTT2P0CG29 244 aa13.23□□□□□ -0.29
NEK9-211ENST00000557673 GSTT2BP0CG30 244 aa13.23□□□□□ -0.29
NEK9-211ENST00000557673 ZNF134P52741 427 aa13.23□□□□□ -0.29
NEK9-211ENST00000557673 ZNF137PP52743 207 aa13.23□□□□□ -0.29
NEK9-211ENST00000557673 IGSF11Q5DX21 431 aa13.23□□□□□ -0.29
NEK9-211ENST00000557673 CT45A1Q5HYN5 189 aa13.23□□□□□ -0.29
NEK9-211ENST00000557673 CNIH2Q6PI25 160 aa13.23□□□□□ -0.29
NEK9-211ENST00000557673 Q6ZS46 218 aa13.23□□□□□ -0.29
NEK9-211ENST00000557673 C16orf82Q7Z2V1 217 aa13.23□□□□□ -0.29
NEK9-211ENST00000557673 CENPVQ7Z7K6 275 aaPredicted RBP13.23□□□□□ -0.29
NEK9-211ENST00000557673 GVQW1Q8N7I0 195 aa13.23□□□□□ -0.29
NEK9-211ENST00000557673 OR2AK2Q8NG84 335 aa13.23□□□□□ -0.29
NEK9-211ENST00000557673 CT45A3Q8NHU0 189 aa13.23□□□□□ -0.29
NEK9-211ENST00000557673 MCFD2Q8NI22 146 aa13.23□□□□□ -0.29
NEK9-211ENST00000557673 CAPSLQ8WWF8 208 aa13.23□□□□□ -0.29
NEK9-211ENST00000557673 TOMM40LQ969M1 308 aa13.23□□□□□ -0.29
NEK9-211ENST00000557673 ST6GALNAC5Q9BVH7 336 aa13.23□□□□□ -0.29
NEK9-211ENST00000557673 IFI27L2Q9H2X8 130 aa13.23□□□□□ -0.29
NEK9-211ENST00000557673 ANAPC10Q9UM13 185 aa13.23□□□□□ -0.29
NEK9-211ENST00000557673 TSSC4Q9Y5U2 329 aaPredicted RBP13.23□□□□□ -0.29
NEK9-211ENST00000557673 TENM3Q9P273 2699 aa13.22□□□□□ -0.29
NEK9-211ENST00000557673 TCRBV4S1A1TA0A5B7 111 aa13.22□□□□□ -0.29
NEK9-211ENST00000557673 OOSP1A8MZH6 123 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms