RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 GPR37O15354 613 aa10.31□□□□□ -0.76
SHMT2-233ENST00000557529 ST8SIA5O15466 376 aa10.31□□□□□ -0.76
SHMT2-233ENST00000557529 TSC22D2O75157 780 aa10.31□□□□□ -0.76
SHMT2-233ENST00000557529 RLN2P04090 185 aa10.31□□□□□ -0.76
SHMT2-233ENST00000557529 LYNX1P0DP58 116 aa10.31□□□□□ -0.76
SHMT2-233ENST00000557529 DAOP14920 347 aa10.31□□□□□ -0.76
SHMT2-233ENST00000557529 SSTR2P30874 369 aa10.31□□□□□ -0.76
SHMT2-233ENST00000557529 S100A11P31949 105 aa10.31□□□□□ -0.76
SHMT2-233ENST00000557529 NUP62P37198 522 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-233ENST00000557529 GPR12P47775 334 aa10.31□□□□□ -0.76
SHMT2-233ENST00000557529 EIF4EBP1Q13541 118 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-233ENST00000557529 ZNF345Q14585 488 aa10.31□□□□□ -0.76
SHMT2-233ENST00000557529 SMCO1Q147U7 214 aa10.31□□□□□ -0.76
SHMT2-233ENST00000557529 OPCMLQ14982 345 aa10.31□□□□□ -0.76
SHMT2-233ENST00000557529 THOC7Q6I9Y2 204 aaKnown RBP10.31□□□□□ -0.76
SHMT2-233ENST00000557529 FAM53AQ6NSI3 398 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-233ENST00000557529 ACOT7LQ6ZUV0 252 aa10.31□□□□□ -0.76
SHMT2-233ENST00000557529 TMUB2Q71RG4 321 aa10.31□□□□□ -0.76
SHMT2-233ENST00000557529 INO80EQ8NBZ0 244 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-233ENST00000557529 H1FXQ92522 213 aaKnown RBP10.31□□□□□ -0.76
SHMT2-233ENST00000557529 RAB39BQ96DA2 213 aa10.31□□□□□ -0.76
SHMT2-233ENST00000557529 ZNF714Q96N38 554 aa10.31□□□□□ -0.76
SHMT2-233ENST00000557529 GPHA2Q96T91 129 aa10.31□□□□□ -0.76
SHMT2-233ENST00000557529 HSD17B10Q99714 261 aaKnown RBP10.31□□□□□ -0.76
SHMT2-233ENST00000557529 C19orf12Q9NSK7 152 aa10.31□□□□□ -0.76
SHMT2-233ENST00000557529 CTSZQ9UBR2 303 aa10.31□□□□□ -0.76
SHMT2-233ENST00000557529 GAB2Q9UQC2 676 aa10.31□□□□□ -0.76
SHMT2-233ENST00000557529 C1QL1O75973 258 aa10.3□□□□□ -0.76
SHMT2-233ENST00000557529 ATG12O94817 140 aa10.3□□□□□ -0.76
SHMT2-233ENST00000557529 ZNF16P17020 682 aaPredicted RBP10.3□□□□□ -0.76
SHMT2-233ENST00000557529 OMGP23515 440 aa10.3□□□□□ -0.76
SHMT2-233ENST00000557529 S100A10P60903 97 aa10.3□□□□□ -0.76
SHMT2-233ENST00000557529 RAB32Q13637 225 aa10.3□□□□□ -0.76
SHMT2-233ENST00000557529 Q3ZCU0 254 aa10.3□□□□□ -0.76
SHMT2-233ENST00000557529 TMEM155Q4W5P6 130 aa10.3□□□□□ -0.76
SHMT2-233ENST00000557529 NMSQ5H8A3 153 aa10.3□□□□□ -0.76
SHMT2-233ENST00000557529 TMEM200BQ69YZ2 307 aa10.3□□□□□ -0.76
SHMT2-233ENST00000557529 ZNF767PQ75MW2 155 aa10.3□□□□□ -0.76
SHMT2-233ENST00000557529 FGFRL1Q8N441 504 aa10.3□□□□□ -0.76
SHMT2-233ENST00000557529 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.3□□□□□ -0.76
SHMT2-233ENST00000557529 DCUN1D4Q92564 292 aa10.3□□□□□ -0.76
SHMT2-233ENST00000557529 SPOCK3Q9BQ16 436 aa10.3□□□□□ -0.76
SHMT2-233ENST00000557529 ABHD14AQ9BUJ0 271 aa10.3□□□□□ -0.76
SHMT2-233ENST00000557529 RNF126Q9BV68 326 aa10.3□□□□□ -0.76
SHMT2-233ENST00000557529 CHODLQ9H9P2 273 aa10.3□□□□□ -0.76
SHMT2-233ENST00000557529 SDHAF2Q9NX18 166 aa10.3□□□□□ -0.76
SHMT2-233ENST00000557529 MIOXQ9UGB7 285 aa10.3□□□□□ -0.76
SHMT2-233ENST00000557529 RPUSD1Q9UJJ7 312 aaKnown RBP10.3□□□□□ -0.76
SHMT2-233ENST00000557529 ADGRG4Q8IZF6 3080 aa10.3□□□□□ -0.76
SHMT2-233ENST00000557529 CLEC18AA5D8T8 446 aa10.29□□□□□ -0.76
SHMT2-233ENST00000557529 CLDN1O95832 211 aa10.29□□□□□ -0.76
SHMT2-233ENST00000557529 SLC25A6P12236 298 aa10.29□□□□□ -0.76
SHMT2-233ENST00000557529 NFYBP25208 207 aa10.29□□□□□ -0.76
SHMT2-233ENST00000557529 TMEM33P57088 247 aa10.29□□□□□ -0.76
SHMT2-233ENST00000557529 ZNF273Q14593 569 aa10.29□□□□□ -0.76
SHMT2-233ENST00000557529 HEPN1Q6WQI6 88 aa10.29□□□□□ -0.76
SHMT2-233ENST00000557529 KCNRGQ8N5I3 272 aa10.29□□□□□ -0.76
SHMT2-233ENST00000557529 CLEC18CQ8NCF0 446 aa10.29□□□□□ -0.76
SHMT2-233ENST00000557529 RNASE11Q8TAA1 199 aaKnown RBP10.29□□□□□ -0.76
SHMT2-233ENST00000557529 TCTEX1D2Q8WW35 142 aa10.29□□□□□ -0.76
SHMT2-233ENST00000557529 LSM10Q969L4 123 aaKnown RBP10.29□□□□□ -0.76
SHMT2-233ENST00000557529 C5orf30Q96GV9 206 aa10.29□□□□□ -0.76
SHMT2-233ENST00000557529 ABHD14BQ96IU4 210 aa10.29□□□□□ -0.76
SHMT2-233ENST00000557529 ARL6Q9H0F7 186 aa10.29□□□□□ -0.76
SHMT2-233ENST00000557529 IFI27L2Q9H2X8 130 aa10.29□□□□□ -0.76
SHMT2-233ENST00000557529 HEXA-AS1Q9H8Q6 139 aa10.29□□□□□ -0.76
SHMT2-233ENST00000557529 RALYQ9UKM9 306 aaKnown RBP10.29□□□□□ -0.76
SHMT2-233ENST00000557529 A0A1B0GU03 582 aa10.28□□□□□ -0.76
SHMT2-233ENST00000557529 H0YIZ8 118 aa10.28□□□□□ -0.76
SHMT2-233ENST00000557529 ST8SIA3O43173 380 aa10.28□□□□□ -0.76
SHMT2-233ENST00000557529 PPIHO43447 177 aaKnown RBP10.28□□□□□ -0.76
SHMT2-233ENST00000557529 FCN3O75636 299 aa10.28□□□□□ -0.76
SHMT2-233ENST00000557529 SCGB1D2O95969 90 aa10.28□□□□□ -0.76
SHMT2-233ENST00000557529 F12P00748 615 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-233ENST00000557529 LPAR6P43657 344 aa10.28□□□□□ -0.76
SHMT2-233ENST00000557529 TLE4Q04727 773 aa10.28□□□□□ -0.76
SHMT2-233ENST00000557529 ZNF585BQ52M93 769 aa10.28□□□□□ -0.76
SHMT2-233ENST00000557529 AVPI1Q5T686 147 aa10.28□□□□□ -0.76
SHMT2-233ENST00000557529 PRAMEF5Q5TYX0 476 aa10.28□□□□□ -0.76
SHMT2-233ENST00000557529 ZNF439Q8NDP4 499 aa10.28□□□□□ -0.76
SHMT2-233ENST00000557529 OR8H1Q8NGG4 311 aa10.28□□□□□ -0.76
SHMT2-233ENST00000557529 OR8B3Q8NGG8 313 aa10.28□□□□□ -0.76
SHMT2-233ENST00000557529 OR4D5Q8NGN0 318 aa10.28□□□□□ -0.76
SHMT2-233ENST00000557529 CD300LFQ8TDQ1 290 aa10.28□□□□□ -0.76
SHMT2-233ENST00000557529 NEIL1Q96FI4 390 aaPredicted RBP10.28□□□□□ -0.76
SHMT2-233ENST00000557529 OR8B2Q96RD0 313 aa10.28□□□□□ -0.76
SHMT2-233ENST00000557529 A0A1W2PPH5 198 aa10.27□□□□□ -0.76
SHMT2-233ENST00000557529 KANTRA0A1W2PQU2 76 aa10.27□□□□□ -0.76
SHMT2-233ENST00000557529 RNF222A6NCQ9 220 aa10.27□□□□□ -0.76
SHMT2-233ENST00000557529 RAB29O14966 203 aa10.27□□□□□ -0.76
SHMT2-233ENST00000557529 DEDDO75618 318 aa10.27□□□□□ -0.76
SHMT2-233ENST00000557529 MBPP02686 304 aaPredicted RBP10.27□□□□□ -0.76
SHMT2-233ENST00000557529 KIR2DS2P43631 304 aa10.27□□□□□ -0.76
SHMT2-233ENST00000557529 ZNF134P52741 427 aa10.27□□□□□ -0.76
SHMT2-233ENST00000557529 EFNA4P52798 201 aa10.27□□□□□ -0.76
SHMT2-233ENST00000557529 AKR1C2P52895 323 aa10.27□□□□□ -0.76
SHMT2-233ENST00000557529 AP2S1P53680 142 aaPredicted RBP10.27□□□□□ -0.76
SHMT2-233ENST00000557529 RPL30P62888 115 aaKnown RBP10.27□□□□□ -0.76
SHMT2-233ENST00000557529 CT45A1Q5HYN5 189 aa10.27□□□□□ -0.76
SHMT2-233ENST00000557529 BTNL3Q6UXE8 466 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms