RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 ODF3L1Q8IXM7 274 aa9.96□□□□□ -0.82
SLIRP-209ENST00000557342 KLHDC1Q8N7A1 406 aa9.96□□□□□ -0.82
SLIRP-209ENST00000557342 OR5H6Q8NGV6 325 aa9.96□□□□□ -0.82
SLIRP-209ENST00000557342 RAB2BQ8WUD1 216 aa9.96□□□□□ -0.82
SLIRP-209ENST00000557342 EAF1Q96JC9 268 aaPredicted RBP9.96□□□□□ -0.82
SLIRP-209ENST00000557342 S1PR3Q99500 378 aa9.96□□□□□ -0.82
SLIRP-209ENST00000557342 DCSTAMPQ9H295 470 aa9.96□□□□□ -0.82
SLIRP-209ENST00000557342 IFI27L2Q9H2X8 130 aa9.96□□□□□ -0.82
SLIRP-209ENST00000557342 DIABLOQ9NR28 239 aa9.96□□□□□ -0.82
SLIRP-209ENST00000557342 OR1A1Q9P1Q5 309 aa9.96□□□□□ -0.82
SLIRP-209ENST00000557342 SAA2-SAA4A0A096LPE2 208 aa9.95□□□□□ -0.82
SLIRP-209ENST00000557342 M0QZ24 198 aa9.95□□□□□ -0.82
SLIRP-209ENST00000557342 ST8SIA5O15466 376 aa9.95□□□□□ -0.82
SLIRP-209ENST00000557342 NOL3O60936 208 aaKnown RBP9.95□□□□□ -0.82
SLIRP-209ENST00000557342 SAA2P0DJI9 122 aaPredicted RBP9.95□□□□□ -0.82
SLIRP-209ENST00000557342 GNG2P59768 71 aa9.95□□□□□ -0.82
SLIRP-209ENST00000557342 LSAMPQ13449 338 aa9.95□□□□□ -0.82
SLIRP-209ENST00000557342 ZNF260Q3ZCT1 412 aa9.95□□□□□ -0.82
SLIRP-209ENST00000557342 FBLN7Q53RD9 439 aa9.95□□□□□ -0.82
SLIRP-209ENST00000557342 PRR31Q5SQ13 230 aa9.95□□□□□ -0.82
SLIRP-209ENST00000557342 GPR107Q5VW38 600 aa9.95□□□□□ -0.82
SLIRP-209ENST00000557342 Q6ZS46 218 aa9.95□□□□□ -0.82
SLIRP-209ENST00000557342 C5orf56Q8N8D9 126 aa9.95□□□□□ -0.82
SLIRP-209ENST00000557342 OR8H1Q8NGG4 311 aa9.95□□□□□ -0.82
SLIRP-209ENST00000557342 OR10J5Q8NHC4 309 aa9.95□□□□□ -0.82
SLIRP-209ENST00000557342 SLC25A46Q96AG3 418 aa9.95□□□□□ -0.82
SLIRP-209ENST00000557342 ISOC1Q96CN7 298 aa9.95□□□□□ -0.82
SLIRP-209ENST00000557342 KCTD12Q96CX2 325 aaKnown RBP9.95□□□□□ -0.82
SLIRP-209ENST00000557342 SLC25A38Q96DW6 304 aa9.95□□□□□ -0.82
SLIRP-209ENST00000557342 CABLES2Q9BTV7 478 aa9.95□□□□□ -0.82
SLIRP-209ENST00000557342 TOLLIPQ9H0E2 274 aa9.95□□□□□ -0.82
SLIRP-209ENST00000557342 C11orf54Q9H0W9 315 aaPredicted RBP9.95□□□□□ -0.82
SLIRP-209ENST00000557342 ZNF230Q9UIE0 474 aaPredicted RBP9.95□□□□□ -0.82
SLIRP-209ENST00000557342 IGKV1-6A0A0C4DH72 117 aa9.94□□□□□ -0.82
SLIRP-209ENST00000557342 TMEM235A6NFC5 223 aa9.94□□□□□ -0.82
SLIRP-209ENST00000557342 NCBP2LA6PVI3 153 aaKnown RBP9.94□□□□□ -0.82
SLIRP-209ENST00000557342 BET1O15155 118 aa9.94□□□□□ -0.82
SLIRP-209ENST00000557342 AMY1AP04745 511 aa9.94□□□□□ -0.82
SLIRP-209ENST00000557342 AMY2AP04746 511 aa9.94□□□□□ -0.82
SLIRP-209ENST00000557342 GSTT2P0CG29 244 aa9.94□□□□□ -0.82
SLIRP-209ENST00000557342 GSTT2BP0CG30 244 aa9.94□□□□□ -0.82
SLIRP-209ENST00000557342 OR3A3P47888 321 aa9.94□□□□□ -0.82
SLIRP-209ENST00000557342 VBP1P61758 197 aa9.94□□□□□ -0.82
SLIRP-209ENST00000557342 NCS1P62166 190 aa9.94□□□□□ -0.82
SLIRP-209ENST00000557342 C9orf152Q5JTZ5 239 aa9.94□□□□□ -0.82
SLIRP-209ENST00000557342 UBE2NLQ5JXB2 153 aa9.94□□□□□ -0.82
SLIRP-209ENST00000557342 Q8N6K4 173 aa9.94□□□□□ -0.82
SLIRP-209ENST00000557342 DGCR14Q96DF8 476 aaKnown RBP9.94□□□□□ -0.82
SLIRP-209ENST00000557342 S100A16Q96FQ6 103 aaKnown RBP9.94□□□□□ -0.82
SLIRP-209ENST00000557342 NABP2Q9BQ15 211 aa9.94□□□□□ -0.82
SLIRP-209ENST00000557342 GINS4Q9BRT9 223 aa9.94□□□□□ -0.82
SLIRP-209ENST00000557342 MRPL20Q9BYC9 149 aaKnown RBP9.94□□□□□ -0.82
SLIRP-209ENST00000557342 WNT10AQ9GZT5 417 aa9.94□□□□□ -0.82
SLIRP-209ENST00000557342 NAA50Q9GZZ1 169 aaKnown RBP9.94□□□□□ -0.82
SLIRP-209ENST00000557342 ABCG5Q9H222 651 aa9.94□□□□□ -0.82
SLIRP-209ENST00000557342 RDH8Q9NYR8 311 aa9.94□□□□□ -0.82
SLIRP-209ENST00000557342 RSL24D1Q9UHA3 163 aaKnown RBP9.94□□□□□ -0.82
SLIRP-209ENST00000557342 ZNF221Q9UK13 617 aa9.94□□□□□ -0.82
SLIRP-209ENST00000557342 TENM1Q9UKZ4 2725 aa9.94□□□□□ -0.82
SLIRP-209ENST00000557342 TRAV18A0A075B6X5 111 aa9.93□□□□□ -0.82
SLIRP-209ENST00000557342 TRBV6-7A0A0A0MS04 114 aa9.93□□□□□ -0.82
SLIRP-209ENST00000557342 ZNF736B4DX44 427 aaPredicted RBP9.93□□□□□ -0.82
SLIRP-209ENST00000557342 FBXO24O75426 580 aa9.93□□□□□ -0.82
SLIRP-209ENST00000557342 CTXN2P0C2S0 81 aa9.93□□□□□ -0.82
SLIRP-209ENST00000557342 CTF1Q16619 201 aa9.93□□□□□ -0.82
SLIRP-209ENST00000557342 IGSF11Q5DX21 431 aa9.93□□□□□ -0.82
SLIRP-209ENST00000557342 CENPVQ7Z7K6 275 aaPredicted RBP9.93□□□□□ -0.82
SLIRP-209ENST00000557342 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.93□□□□□ -0.82
SLIRP-209ENST00000557342 NUDCD2Q8WVJ2 157 aa9.93□□□□□ -0.82
SLIRP-209ENST00000557342 ACOT12Q8WYK0 555 aa9.93□□□□□ -0.82
SLIRP-209ENST00000557342 MAFIPQ8WZ33 124 aa9.93□□□□□ -0.82
SLIRP-209ENST00000557342 ABHD14BQ96IU4 210 aa9.93□□□□□ -0.82
SLIRP-209ENST00000557342 AGMATQ9BSE5 352 aa9.93□□□□□ -0.82
SLIRP-209ENST00000557342 ST6GALNAC5Q9BVH7 336 aa9.93□□□□□ -0.82
SLIRP-209ENST00000557342 PARP12Q9H0J9 701 aaKnown RBP9.93□□□□□ -0.82
SLIRP-209ENST00000557342 LIN7CQ9NUP9 197 aaKnown RBP9.93□□□□□ -0.82
SLIRP-209ENST00000557342 ELF5Q9UKW6 265 aaPredicted RBP9.93□□□□□ -0.82
SLIRP-209ENST00000557342 ANK2Q01484 3957 aa9.93□□□□□ -0.82
SLIRP-209ENST00000557342 CCDC160A6NGH7 325 aa9.92□□□□□ -0.82
SLIRP-209ENST00000557342 OR5H14A6NHG9 310 aa9.92□□□□□ -0.82
SLIRP-209ENST00000557342 H3BMQ9 156 aa9.92□□□□□ -0.82
SLIRP-209ENST00000557342 XRCC3O43542 346 aa9.92□□□□□ -0.82
SLIRP-209ENST00000557342 MC5RP33032 325 aa9.92□□□□□ -0.82
SLIRP-209ENST00000557342 GPR12P47775 334 aa9.92□□□□□ -0.82
SLIRP-209ENST00000557342 RORCP51449 518 aa9.92□□□□□ -0.82
SLIRP-209ENST00000557342 C2orf68Q2NKX9 166 aa9.92□□□□□ -0.82
SLIRP-209ENST00000557342 TMEM95Q3KNT9 176 aa9.92□□□□□ -0.82
SLIRP-209ENST00000557342 RPL39P5Q59GN2 51 aa9.92□□□□□ -0.82
SLIRP-209ENST00000557342 SAMD12Q8N8I0 201 aa9.92□□□□□ -0.82
SLIRP-209ENST00000557342 Q8N9W7 124 aa9.92□□□□□ -0.82
SLIRP-209ENST00000557342 CMTM3Q96MX0 182 aa9.92□□□□□ -0.82
SLIRP-209ENST00000557342 RASL11BQ9BPW5 248 aa9.92□□□□□ -0.82
SLIRP-209ENST00000557342 ZNF251Q9BRH9 671 aa9.92□□□□□ -0.82
SLIRP-209ENST00000557342 GAB2Q9UQC2 676 aa9.92□□□□□ -0.82
SLIRP-209ENST00000557342 RBM7Q9Y580 266 aaKnown RBP9.92□□□□□ -0.82
SLIRP-209ENST00000557342 SH2D7A6NKC9 451 aaPredicted RBP9.91□□□□□ -0.82
SLIRP-209ENST00000557342 CT45A6P0DMU7 189 aa9.91□□□□□ -0.82
SLIRP-209ENST00000557342 CT45A5P0DMU8 189 aa9.91□□□□□ -0.82
SLIRP-209ENST00000557342 CT45A7P0DMV0 189 aa9.91□□□□□ -0.82
SLIRP-209ENST00000557342 CBX5P45973 191 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms