RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 RPS16P62249 146 aaKnown RBP4.02□□□□□ -1.77
ATXN3-247ENST00000557311 RANP62826 216 aaKnown RBP4.02□□□□□ -1.77
ATXN3-247ENST00000557311 HOXA4Q00056 320 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-247ENST00000557311 PAX2Q02962 417 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 EGR4Q05215 589 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 FUT5Q11128 374 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 JOSD1Q15040 202 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-247ENST00000557311 HMGN3Q15651 99 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 TBC1D28Q2M2D7 210 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 MS4A18Q3C1V0 323 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 ZNF718Q3SXZ3 478 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 PYDC2Q56P42 97 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 SAMD4BQ5PRF9 694 aaKnown RBP4.02□□□□□ -1.77
ATXN3-247ENST00000557311 C6orf136Q5SQH8 315 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 MRPL2Q5T653 305 aaKnown RBP4.02□□□□□ -1.77
ATXN3-247ENST00000557311 OR2G6Q5TZ20 316 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 LIPKQ5VXJ0 399 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 UNQ6126/PRO20091Q6UXV3 157 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 ACOT7LQ6ZUV0 252 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 LINC01551Q86U37 167 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 SLC30A8Q8IWU4 369 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 UEVLDQ8IX04 471 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 AQP12AQ8IXF9 295 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 C1orf174Q8IYL3 243 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 CLECL1Q8IZS7 167 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 PAQR4Q8N4S7 273 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-247ENST00000557311 SAMD12Q8N8I0 201 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 TMEM185AQ8NFB2 350 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 OR1L6Q8NGR2 347 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 OR6N1Q8NGY5 312 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 OR52P1PQ8NH57 321 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 FGFBP3Q8TAT2 258 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 TWIST2Q8WVJ9 160 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 SSMEM1Q8WWF3 244 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 ORAI1Q96D31 301 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 FAAP24Q9BTP7 215 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 CHRDL1Q9BU40 450 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 EMC6Q9BV81 110 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 BARHL1Q9BZE3 327 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 ULBP2Q9BZM5 246 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 CST9LQ9H4G1 147 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 C16orf95Q9H693 158 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 TUBA4BQ9H853 241 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 MED20Q9H944 212 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 TMEM106BQ9NUM4 274 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 NECAP2Q9NVZ3 263 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 MARCOQ9UEW3 520 aaPredicted RBP4.02□□□□□ -1.77
ATXN3-247ENST00000557311 EMCNQ9ULC0 261 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 A4GNTQ9UNA3 340 aa4.02□□□□□ -1.77
ATXN3-247ENST00000557311 CMYA5Q8N3K9 4069 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 A0A087WUJ7 227 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 TRAV40A0A0B4J280 105 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 IGHV2-70DA0A0C4DH43 119 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 A0A1W2PPM1 405 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 ANKRD61A6NGH8 418 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 OR5H14A6NHG9 310 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 LINC01548A6NM66 108 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 CCL25O15444 150 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 GPR137BO60478 399 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 YIF1AO95070 293 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 FARS2O95363 451 aaKnown RBP4.01□□□□□ -1.77
ATXN3-247ENST00000557311 CLIC3O95833 236 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 TOMM40O96008 361 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 FABP3P05413 133 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 BCHEP06276 602 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 ANXA2P07355 339 aaKnown RBP4.01□□□□□ -1.77
ATXN3-247ENST00000557311 RPS4Y1P22090 263 aaKnown RBP4.01□□□□□ -1.77
ATXN3-247ENST00000557311 SSTR5P35346 364 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 CHI3L1P36222 383 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-247ENST00000557311 MDH2P40926 338 aaKnown RBP4.01□□□□□ -1.77
ATXN3-247ENST00000557311 NPBWR1P48145 328 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 CDH12P55289 794 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 SNU13P55769 128 aaKnown RBP4.01□□□□□ -1.77
ATXN3-247ENST00000557311 TAS2R41P59536 307 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 SEC61A1P61619 476 aaKnown RBP4.01□□□□□ -1.77
ATXN3-247ENST00000557311 MS4A2Q01362 244 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 HERPUD1Q15011 391 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 SYPL1Q16563 259 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 TMEM241Q24JQ0 296 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 ODF4Q2M2E3 257 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 SLC36A2Q495M3 483 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 TMEM244Q5VVB8 128 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 ALKAL2Q6UX46 152 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 GSG1LQ6UXU4 331 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 NHLRC1Q6VVB1 395 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 BRD3OSQ6XYD6 125 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 ZNF705AQ6ZN79 300 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-247ENST00000557311 GDPGP1Q6ZNW5 385 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 OAFQ86UD1 273 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 MUC20Q8N307 709 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-247ENST00000557311 ZNF664Q8N3J9 261 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 SLC22A24Q8N4F4 322 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 RNF148Q8N7C7 305 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 ZSCAN4Q8NAM6 433 aaPredicted RBP4.01□□□□□ -1.77
ATXN3-247ENST00000557311 ZNF738Q8NE65 137 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 OR2AK2Q8NG84 335 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 OR11H4Q8NGC9 324 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 OR4P4Q8NGL7 312 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 OR1J1Q8NGS3 322 aa4.01□□□□□ -1.77
ATXN3-247ENST00000557311 TNFAIP8L1Q8WVP5 186 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms