RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 ZNF251Q9BRH9 671 aa10.35□□□□□ -0.75
SHMT2-227ENST00000557269 PRDM13Q9H4Q3 707 aa10.35□□□□□ -0.75
SHMT2-227ENST00000557269 EHFQ9NZC4 300 aa10.35□□□□□ -0.75
SHMT2-227ENST00000557269 FAM96BQ9Y3D0 163 aa10.35□□□□□ -0.75
SHMT2-227ENST00000557269 SAA2-SAA4A0A096LPE2 208 aa10.34□□□□□ -0.75
SHMT2-227ENST00000557269 ANKRD20A5PA0PJZ0 165 aa10.34□□□□□ -0.75
SHMT2-227ENST00000557269 CD74P04233 296 aa10.34□□□□□ -0.75
SHMT2-227ENST00000557269 SAA2P0DJI9 122 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-227ENST00000557269 ZNF137PP52743 207 aa10.34□□□□□ -0.75
SHMT2-227ENST00000557269 SSBP1Q04837 148 aaKnown RBP10.34□□□□□ -0.75
SHMT2-227ENST00000557269 FBLN7Q53RD9 439 aa10.34□□□□□ -0.75
SHMT2-227ENST00000557269 RPL39P5Q59GN2 51 aa10.34□□□□□ -0.75
SHMT2-227ENST00000557269 FAAP20Q6NZ36 180 aa10.34□□□□□ -0.75
SHMT2-227ENST00000557269 DHRS11Q6UWP2 260 aa10.34□□□□□ -0.75
SHMT2-227ENST00000557269 Q6YL49 198 aa10.34□□□□□ -0.75
SHMT2-227ENST00000557269 GDPD1Q8N9F7 314 aa10.34□□□□□ -0.75
SHMT2-227ENST00000557269 PIFOQ8TCI5 191 aa10.34□□□□□ -0.75
SHMT2-227ENST00000557269 GIMAP1Q8WWP7 306 aa10.34□□□□□ -0.75
SHMT2-227ENST00000557269 MEGF9Q9H1U4 602 aa10.34□□□□□ -0.75
SHMT2-227ENST00000557269 OCEL1Q9H607 264 aa10.34□□□□□ -0.75
SHMT2-227ENST00000557269 OR2W1Q9Y3N9 320 aa10.34□□□□□ -0.75
SHMT2-227ENST00000557269 AMMECR1Q9Y4X0 333 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-227ENST00000557269 NAV3Q8IVL0 2385 aa10.33□□□□□ -0.76
SHMT2-227ENST00000557269 A0A1W2PPI3 338 aa10.33□□□□□ -0.76
SHMT2-227ENST00000557269 HSD17B6O14756 317 aa10.33□□□□□ -0.76
SHMT2-227ENST00000557269 PPYP01298 95 aa10.33□□□□□ -0.76
SHMT2-227ENST00000557269 IGLV2-14P01704 120 aa10.33□□□□□ -0.76
SHMT2-227ENST00000557269 IGHV4-59P01825 116 aa10.33□□□□□ -0.76
SHMT2-227ENST00000557269 FBP1P09467 338 aa10.33□□□□□ -0.76
SHMT2-227ENST00000557269 ZNF735P0CB33 412 aa10.33□□□□□ -0.76
SHMT2-227ENST00000557269 LINC00205P59089 165 aa10.33□□□□□ -0.76
SHMT2-227ENST00000557269 TAS2R19P59542 299 aa10.33□□□□□ -0.76
SHMT2-227ENST00000557269 KLF9Q13886 244 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-227ENST00000557269 VAX1Q5SQQ9 334 aa10.33□□□□□ -0.76
SHMT2-227ENST00000557269 STEAP1BQ6NZ63 245 aa10.33□□□□□ -0.76
SHMT2-227ENST00000557269 ZNF833PQ6ZTB9 187 aa10.33□□□□□ -0.76
SHMT2-227ENST00000557269 RTN4IP1Q8WWV3 396 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-227ENST00000557269 EDARADDQ8WWZ3 215 aa10.33□□□□□ -0.76
SHMT2-227ENST00000557269 TOMM40LQ969M1 308 aa10.33□□□□□ -0.76
SHMT2-227ENST00000557269 RPEQ96AT9 228 aa10.33□□□□□ -0.76
SHMT2-227ENST00000557269 DUX5Q96PT3 197 aa10.33□□□□□ -0.76
SHMT2-227ENST00000557269 ZNF2Q9BSG1 426 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-227ENST00000557269 OR2D2Q9H210 308 aa10.33□□□□□ -0.76
SHMT2-227ENST00000557269 ESM1Q9NQ30 184 aa10.33□□□□□ -0.76
SHMT2-227ENST00000557269 ZNF107Q9UII5 783 aaPredicted RBP10.33□□□□□ -0.76
SHMT2-227ENST00000557269 RAB29O14966 203 aa10.32□□□□□ -0.76
SHMT2-227ENST00000557269 HOXA3O43365 443 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-227ENST00000557269 RAB3DO95716 219 aa10.32□□□□□ -0.76
SHMT2-227ENST00000557269 CSF1P09603 554 aa10.32□□□□□ -0.76
SHMT2-227ENST00000557269 CD24P25063 80 aa10.32□□□□□ -0.76
SHMT2-227ENST00000557269 CEACAM3P40198 252 aa10.32□□□□□ -0.76
SHMT2-227ENST00000557269 IER3P46695 156 aa10.32□□□□□ -0.76
SHMT2-227ENST00000557269 RAB7AP51149 207 aa10.32□□□□□ -0.76
SHMT2-227ENST00000557269 LUMP51884 338 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-227ENST00000557269 FXYD4P59646 89 aa10.32□□□□□ -0.76
SHMT2-227ENST00000557269 SRSF2Q01130 221 aaKnown RBP10.32□□□□□ -0.76
SHMT2-227ENST00000557269 ZNF816Q0VGE8 651 aaPredicted RBP10.32□□□□□ -0.76
SHMT2-227ENST00000557269 RNASE10Q5GAN6 216 aaKnown RBP10.32□□□□□ -0.76
SHMT2-227ENST00000557269 OR4C16Q8NGL9 310 aa10.32□□□□□ -0.76
SHMT2-227ENST00000557269 OR56B4Q8NH76 319 aa10.32□□□□□ -0.76
SHMT2-227ENST00000557269 CFHR4Q92496 578 aa10.32□□□□□ -0.76
SHMT2-227ENST00000557269 ZDHHC16Q969W1 377 aa10.32□□□□□ -0.76
SHMT2-227ENST00000557269 MRPL20Q9BYC9 149 aaKnown RBP10.32□□□□□ -0.76
SHMT2-227ENST00000557269 TNFRSF19Q9NS68 423 aa10.32□□□□□ -0.76
SHMT2-227ENST00000557269 SDHAF2Q9NX18 166 aa10.32□□□□□ -0.76
SHMT2-227ENST00000557269 CUBNO60494 3623 aa10.32□□□□□ -0.76
SHMT2-227ENST00000557269 IGHV3-72A0A0B4J1Y9 119 aa10.31□□□□□ -0.76
SHMT2-227ENST00000557269 IGHV1-3A0A0C4DH29 117 aa10.31□□□□□ -0.76
SHMT2-227ENST00000557269 OR5H14A6NHG9 310 aa10.31□□□□□ -0.76
SHMT2-227ENST00000557269 VGLL3A8MV65 326 aa10.31□□□□□ -0.76
SHMT2-227ENST00000557269 TIMM23O14925 209 aa10.31□□□□□ -0.76
SHMT2-227ENST00000557269 GAPDHP04406 335 aaKnown RBP10.31□□□□□ -0.76
SHMT2-227ENST00000557269 CT45A6P0DMU7 189 aa10.31□□□□□ -0.76
SHMT2-227ENST00000557269 CT45A5P0DMU8 189 aa10.31□□□□□ -0.76
SHMT2-227ENST00000557269 CT45A7P0DMV0 189 aa10.31□□□□□ -0.76
SHMT2-227ENST00000557269 IL7P13232 177 aa10.31□□□□□ -0.76
SHMT2-227ENST00000557269 TBPP20226 339 aa10.31□□□□□ -0.76
SHMT2-227ENST00000557269 IL3RAP26951 378 aa10.31□□□□□ -0.76
SHMT2-227ENST00000557269 GPR12P47775 334 aa10.31□□□□□ -0.76
SHMT2-227ENST00000557269 LSAMPQ13449 338 aa10.31□□□□□ -0.76
SHMT2-227ENST00000557269 ACTBL2Q562R1 376 aa10.31□□□□□ -0.76
SHMT2-227ENST00000557269 AADACL3Q5VUY0 350 aa10.31□□□□□ -0.76
SHMT2-227ENST00000557269 GLDNQ6ZMI3 551 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-227ENST00000557269 DRAM1Q8N682 238 aa10.31□□□□□ -0.76
SHMT2-227ENST00000557269 ZDHHC22Q8N966 263 aa10.31□□□□□ -0.76
SHMT2-227ENST00000557269 DRAXINQ8NBI3 349 aaPredicted RBP10.31□□□□□ -0.76
SHMT2-227ENST00000557269 OR6F1Q8NGZ6 308 aa10.31□□□□□ -0.76
SHMT2-227ENST00000557269 S100ZQ8WXG8 99 aa10.31□□□□□ -0.76
SHMT2-227ENST00000557269 MRGPRFQ96AM1 343 aa10.31□□□□□ -0.76
SHMT2-227ENST00000557269 MOB3AQ96BX8 217 aa10.31□□□□□ -0.76
SHMT2-227ENST00000557269 GPHA2Q96T91 129 aa10.31□□□□□ -0.76
SHMT2-227ENST00000557269 SSX3Q99909 188 aa10.31□□□□□ -0.76
SHMT2-227ENST00000557269 FXYD6Q9H0Q3 95 aa10.31□□□□□ -0.76
SHMT2-227ENST00000557269 CCL28Q9NRJ3 127 aa10.31□□□□□ -0.76
SHMT2-227ENST00000557269 TAS2R8Q9NYW2 309 aa10.31□□□□□ -0.76
SHMT2-227ENST00000557269 PIPOXQ9P0Z9 390 aa10.31□□□□□ -0.76
SHMT2-227ENST00000557269 ZNF221Q9UK13 617 aa10.31□□□□□ -0.76
SHMT2-227ENST00000557269 RBM7Q9Y580 266 aaKnown RBP10.31□□□□□ -0.76
SHMT2-227ENST00000557269 ZFHX3Q15911 3703 aa10.31□□□□□ -0.76
SHMT2-227ENST00000557269 LINC00854A0A1B0GVQ3 168 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms