RNA–Protein interactions for RNA: ENST00000556956.1

SLIRP-208, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 450 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-208ENST00000556956 CYB5R2Q6BCY4 276 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 TEX38Q6PEX7 206 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 LCN15Q6UWW0 184 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 Q6ZS49 121 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 Q6ZSR6 202 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 SSX7Q7RTT5 188 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 NUFIP2Q7Z417 695 aaKnown RBP2.44□□□□□ -2.02
SLIRP-208ENST00000556956 RNF144BQ7Z419 303 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 TBC1D26Q86UD7 250 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 OSR2Q8N2R0 312 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 TMEM217Q8N7C4 229 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 ZNF321PQ8N8H1 164 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 NECAP1Q8NC96 275 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 OR2D3Q8NGH3 330 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 OR51G1Q8NGK1 321 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 OR1N1Q8NGS0 311 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 MPLKIPQ8TAP9 179 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 CMTM2Q8TAZ6 248 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 SPPL3Q8TCT6 385 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 NEK7Q8TDX7 302 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 SLC37A2Q8TED4 501 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 ORAOV1Q8WV07 137 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 LHX4Q969G2 390 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 LSM10Q969L4 123 aaKnown RBP2.44□□□□□ -2.02
SLIRP-208ENST00000556956 PIGTQ969N2 578 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 BORCS8Q96FH0 119 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 WDYHV1Q96HA8 205 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 ZNF845Q96IR2 970 aaPredicted RBP2.44□□□□□ -2.02
SLIRP-208ENST00000556956 LYZL4Q96KX0 146 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 ZNF48Q96MX3 618 aaPredicted RBP2.44□□□□□ -2.02
SLIRP-208ENST00000556956 TECTBQ96PL2 329 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 TP53RKQ96S44 253 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 KLHDC3Q9BQ90 382 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 HDHD3Q9BSH5 251 aaPredicted RBP2.44□□□□□ -2.02
SLIRP-208ENST00000556956 PCGF1Q9BSM1 259 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 EMC6Q9BV81 110 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 RTN4RQ9BZR6 473 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 STRADBQ9C0K7 418 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 OR2J1Q9GZK6 312 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 WWTR1Q9GZV5 400 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 CHRNA10Q9GZZ6 450 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 OR51B6Q9H340 312 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 GAL3ST2Q9H3Q3 398 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 CHODLQ9H9P2 273 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 PNRC2Q9NPJ4 139 aaKnown RBP2.44□□□□□ -2.02
SLIRP-208ENST00000556956 ASCL3Q9NQ33 180 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 TMEM9BQ9NQ34 198 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 GLRX2Q9NS18 164 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 RPRMQ9NS64 109 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 CBLN4Q9NTU7 201 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 MED29Q9NX70 200 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 PSENENQ9NZ42 101 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 IL36GQ9NZH8 169 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 ZNF319Q9P2F9 582 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 DKK4Q9UBT3 224 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 ZNF391Q9UJN7 358 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 TBX21Q9UL17 535 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 FUT9Q9Y231 359 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 PXMP4Q9Y6I8 212 aa2.44□□□□□ -2.02
SLIRP-208ENST00000556956 ANAPC1Q9H1A4 1944 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 IGKV3D-11A0A0A0MRZ8 115 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 TRAV39A0A0B4J263 110 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 KIR2DS1A0A191URI9 304 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 CTXND1A0A1B0GTU2 59 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 TCRBV21S2A2A0A5A6 115 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 C20orf202A1L168 122 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 OR6C6A6NF89 314 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 NKX6-3A6NJ46 265 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 C17orf112F2Z3M2 114 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 F5H5K5 113 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 K7EP13 123 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 M0R135 149 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 SPRY2O43597 315 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 TCF21O43680 179 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 PDE6DO43924 150 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 SOX15O60248 233 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 PGLYRP1O75594 196 aaPredicted RBP2.43□□□□□ -2.02
SLIRP-208ENST00000556956 KRTAP5-8O75690 187 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 MMP23AO75900 390 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 OR2J2O76002 312 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 SYNGR4O95473 234 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 SEMA4FO95754 770 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 OPN1LWP04000 364 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 LCATP04180 440 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 SERPINE2P07093 398 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 UMODP07911 640 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 WNT2P09544 360 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 ESDP10768 282 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 TDGF1P13385 188 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 IRF2P14316 349 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 HOXB2P14652 356 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 DRD1P21728 446 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 MDKP21741 143 aaPredicted RBP2.43□□□□□ -2.02
SLIRP-208ENST00000556956 CDAP32320 146 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 KIR2DS4P43632 304 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 CDKN1BP46527 198 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 GNG10P50151 68 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 RAB7AP51149 207 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 BLKP51451 505 aa2.43□□□□□ -2.02
SLIRP-208ENST00000556956 FGF8P55075 233 aaPredicted RBP2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms