RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 KDM3BQ7LBC6 1761 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 TNS2Q63HR2 1409 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 TEX48A0A1B0GUV7 120 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 FAM220BPB1ANY3 271 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 C9JQL5 133 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 C17orf112F2Z3M2 114 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 FXYD1O00168 92 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 JTBO76095 146 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 HRASP01112 189 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 KRASP01116 189 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 TNFP01375 233 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 C1QAP02745 245 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 CD1AP06126 327 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 ZNF286BP0CG31 522 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 IFITM1P13164 125 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 CA7P43166 264 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 MARCKSL1P49006 195 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 GZMMP51124 257 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 SGSHP51688 502 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 XGP55808 180 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 NDUFV3P56181 108 aaKnown RBP5.24□□□□□ -1.57
TDP1-215ENST00000556498 RPS15AP62244 130 aaKnown RBP5.24□□□□□ -1.57
TDP1-215ENST00000556498 RPL31P62899 125 aaKnown RBP5.24□□□□□ -1.57
TDP1-215ENST00000556498 GNG5P63218 68 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 HLA-DRB3P79483 266 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 ZNF92Q03936 586 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 CATR1Q13166 79 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 PPP1R1AQ13522 171 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 HLA-DRB5Q30154 266 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 TIGITQ495A1 244 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 MEIG1Q5JSS6 88 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 PAGE3Q5JUK9 113 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 BVES-AS1Q5T3Y7 98 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 DPPA3Q6W0C5 159 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 Q6ZT83 130 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 PPP1R32Q7Z5V6 425 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 ZNF695Q8IW36 515 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 PRR22Q8IZ63 422 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 SPEM1Q8N4L4 309 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 ZIC4Q8N9L1 334 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 GATD1Q8NB37 220 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 OR4C16Q8NGL9 310 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 OR5AR1Q8NGP9 310 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 OR10D3Q8NH80 312 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 OR1L1Q8NH94 360 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 JOSD2Q8TAC2 188 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 CMTM2Q8TAZ6 248 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 PELI1Q96FA3 418 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 SDF2Q99470 211 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 C19orf24Q9BVV8 132 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 SSBP3Q9BWW4 388 aaPredicted RBP5.24□□□□□ -1.57
TDP1-215ENST00000556498 SLC2A6Q9UGQ3 507 aa5.24□□□□□ -1.57
TDP1-215ENST00000556498 A0A1B0GV50 99 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.23□□□□□ -1.57
TDP1-215ENST00000556498 C5orf49A4QMS7 147 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 C3orf70A6NLC5 250 aaPredicted RBP5.23□□□□□ -1.57
TDP1-215ENST00000556498 DIRC3C9JPN6 131 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 TAPBPO15533 448 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 STC2O76061 302 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 GYPAP02724 150 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 CATP04040 527 aaKnown RBP5.23□□□□□ -1.57
TDP1-215ENST00000556498 H1F0P07305 194 aaKnown RBP5.23□□□□□ -1.57
TDP1-215ENST00000556498 CSN3P07498 182 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 LINC00869P0C866 280 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 FABP2P12104 132 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 CNTFRP26992 372 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 KIR2DS2P43631 304 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 REG1BP48304 166 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 FABP6P51161 128 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 CTXN1P60606 82 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 SNRPGP62308 76 aaKnown RBP5.23□□□□□ -1.57
TDP1-215ENST00000556498 TGFBR3Q03167 851 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 SSBP1Q04837 148 aaKnown RBP5.23□□□□□ -1.57
TDP1-215ENST00000556498 FMODQ06828 376 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 FAM53BQ14153 422 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 IL13RA2Q14627 380 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 SLC25A35Q3KQZ1 300 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 LINC01620Q4KN68 170 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 VAX1Q5SQQ9 334 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 C1orf195Q5TG92 126 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 TSPO2Q5TGU0 170 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 CDC42EP5Q6NZY7 148 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 FBXL22Q6P050 247 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 RASL11AQ6T310 242 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 PIP4P1Q86T03 277 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 TBC1D26Q86UD7 250 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 SAXO1Q8IYX7 474 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 ZNF101Q8IZC7 436 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 OR4F17Q8NGA8 305 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 SLC37A2Q8TED4 501 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 SAP25Q8TEE9 199 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 GEMIN6Q8WXD5 167 aaKnown RBP5.23□□□□□ -1.57
TDP1-215ENST00000556498 DNAJC19Q96DA6 116 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 OR4F4Q96R69 305 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 MS4A6AQ9H2W1 248 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 C20orf141Q9NUB4 165 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 DCAF13Q9NV06 445 aaKnown RBP5.23□□□□□ -1.57
TDP1-215ENST00000556498 C1orf123Q9NWV4 160 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 PEMTQ9UBM1 199 aa5.23□□□□□ -1.57
TDP1-215ENST00000556498 IL36AQ9UHA7 158 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms