RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 COLCA1Q6ZS62 124 aa9.09□□□□□ -0.95
MTHFD1-210ENST00000555252 TIPARPQ7Z3E1 657 aaKnown RBP9.09□□□□□ -0.95
MTHFD1-210ENST00000555252 MRPL30Q8TCC3 161 aaKnown RBP9.09□□□□□ -0.95
MTHFD1-210ENST00000555252 PSMF1Q92530 271 aa9.09□□□□□ -0.95
MTHFD1-210ENST00000555252 PIGCQ92535 297 aa9.09□□□□□ -0.95
MTHFD1-210ENST00000555252 PARLQ9H300 379 aa9.09□□□□□ -0.95
MTHFD1-210ENST00000555252 VSIRQ9H7M9 311 aa9.09□□□□□ -0.95
MTHFD1-210ENST00000555252 PSENENQ9NZ42 101 aa9.09□□□□□ -0.95
MTHFD1-210ENST00000555252 POLR3KQ9Y2Y1 108 aaPredicted RBP9.09□□□□□ -0.95
MTHFD1-210ENST00000555252 USP34Q70CQ2 3546 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 BDP1A6H8Y1 2624 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 IGKV1D-13A0A0B4J2D9 117 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 A0A1W2PPQ1 181 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 SYNGR4O95473 234 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 SERPINE2P07093 398 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 PATE4P0C8F1 98 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 IGKV1-13P0DP09 117 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 MDKP21741 143 aaPredicted RBP9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 OR3A1P47881 315 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 FGF8P55075 233 aaPredicted RBP9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 FGF12P61328 243 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 PAFAH1B2P68402 229 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 TMEM267Q0VDI3 215 aaPredicted RBP9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 RSPO4Q2I0M5 234 aaPredicted RBP9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 BRICD5Q6PL45 260 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 SSX7Q7RTT5 188 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 OR2M7Q8NG81 312 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 TAF15Q92804 592 aaKnown RBP eCLIP9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 THOC3Q96J01 351 aaKnown RBP9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 SPRY4Q9C004 299 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 CCL28Q9NRJ3 127 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 CBLN4Q9NTU7 201 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 PINLYPA6NC86 204 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 C21orf140B9A014 251 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 NPIPB11E5RHQ5 1161 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 TMPRSS2O15393 492 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 SOX15O60248 233 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 SCGB1D1O95968 90 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 JMJD7P0C870 316 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 RPL15P61313 204 aaKnown RBP9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 FOXL1Q12952 345 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 DAZAP2Q15038 168 aaPredicted RBP9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 ABHD17BQ5VST6 288 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 ZNF611Q8N823 705 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 FGFBP3Q8TAT2 258 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 ABHD3Q8WU67 409 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 TMEM37Q8WXS4 190 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 ATG101Q9BSB4 218 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 TMEM208Q9BTX3 173 aa9.08□□□□□ -0.96
MTHFD1-210ENST00000555252 TRAV9-1A0A075B6T8 112 aa9.07□□□□□ -0.96
MTHFD1-210ENST00000555252 CD300LBA8K4G0 201 aa9.07□□□□□ -0.96
MTHFD1-210ENST00000555252 TNFSF13O75888 250 aa9.07□□□□□ -0.96
MTHFD1-210ENST00000555252 GYPAP02724 150 aa9.07□□□□□ -0.96
MTHFD1-210ENST00000555252 ESDP10768 282 aa9.07□□□□□ -0.96
MTHFD1-210ENST00000555252 EDN3P14138 238 aa9.07□□□□□ -0.96
MTHFD1-210ENST00000555252 G0S2P27469 103 aa9.07□□□□□ -0.96
MTHFD1-210ENST00000555252 ARF1P84077 181 aaKnown RBP9.07□□□□□ -0.96
MTHFD1-210ENST00000555252 TMEM249Q2WGJ8 235 aa9.07□□□□□ -0.96
MTHFD1-210ENST00000555252 TMEM144Q7Z5S9 345 aa9.07□□□□□ -0.96
MTHFD1-210ENST00000555252 ZCCHC14Q8WYQ9 949 aaKnown RBP9.07□□□□□ -0.96
MTHFD1-210ENST00000555252 NEIL1Q96FI4 390 aaPredicted RBP9.07□□□□□ -0.96
MTHFD1-210ENST00000555252 WDYHV1Q96HA8 205 aa9.07□□□□□ -0.96
MTHFD1-210ENST00000555252 MIEN1Q9BRT3 115 aa9.07□□□□□ -0.96
MTHFD1-210ENST00000555252 ZNF703Q9H7S9 590 aaPredicted RBP9.07□□□□□ -0.96
MTHFD1-210ENST00000555252 OR2W1Q9Y3N9 320 aa9.07□□□□□ -0.96
MTHFD1-210ENST00000555252 PXMP4Q9Y6I8 212 aa9.07□□□□□ -0.96
MTHFD1-210ENST00000555252 TTC28Q96AY4 2481 aa9.07□□□□□ -0.96
MTHFD1-210ENST00000555252 LNP1A1A4G5 178 aa9.06□□□□□ -0.96
MTHFD1-210ENST00000555252 MLNRO43193 412 aa9.06□□□□□ -0.96
MTHFD1-210ENST00000555252 SCTP09683 121 aa9.06□□□□□ -0.96
MTHFD1-210ENST00000555252 LHX2P50458 406 aa9.06□□□□□ -0.96
MTHFD1-210ENST00000555252 PPP1CBP62140 327 aa9.06□□□□□ -0.96
MTHFD1-210ENST00000555252 TEX43Q6ZNM6 134 aa9.06□□□□□ -0.96
MTHFD1-210ENST00000555252 NECAP1Q8NC96 275 aa9.06□□□□□ -0.96
MTHFD1-210ENST00000555252 RPUSD4Q96CM3 377 aaKnown RBP9.06□□□□□ -0.96
MTHFD1-210ENST00000555252 MS4A10Q96PG2 267 aa9.06□□□□□ -0.96
MTHFD1-210ENST00000555252 SDK1Q7Z5N4 2213 aa9.06□□□□□ -0.96
MTHFD1-210ENST00000555252 A0A0G2JRQ6 117 aa9.06□□□□□ -0.96
MTHFD1-210ENST00000555252 H3BP45 60 aa9.06□□□□□ -0.96
MTHFD1-210ENST00000555252 DEGS1O15121 323 aa9.06□□□□□ -0.96
MTHFD1-210ENST00000555252 NEURL1O76050 574 aa9.06□□□□□ -0.96
MTHFD1-210ENST00000555252 ARR3P36575 388 aa9.06□□□□□ -0.96
MTHFD1-210ENST00000555252 ELLP55199 621 aaPredicted RBP9.06□□□□□ -0.96
MTHFD1-210ENST00000555252 TMEM164Q5U3C3 297 aa9.06□□□□□ -0.96
MTHFD1-210ENST00000555252 SPINK14Q6IE38 97 aa9.06□□□□□ -0.96
MTHFD1-210ENST00000555252 PCSK4Q6UW60 755 aa9.06□□□□□ -0.96
MTHFD1-210ENST00000555252 TMEM14EPQ6UXP3 125 aa9.06□□□□□ -0.96
MTHFD1-210ENST00000555252 HAPLN4Q86UW8 402 aa9.06□□□□□ -0.96
MTHFD1-210ENST00000555252 C17orf78Q8N4C9 275 aa9.06□□□□□ -0.96
MTHFD1-210ENST00000555252 RPP25LQ8N5L8 163 aaKnown RBP9.06□□□□□ -0.96
MTHFD1-210ENST00000555252 ARL6IP6Q8N6S5 226 aa9.06□□□□□ -0.96
MTHFD1-210ENST00000555252 CPEB3Q8NE35 698 aaKnown RBP9.06□□□□□ -0.96
MTHFD1-210ENST00000555252 APOBEC3DQ96AK3 386 aaPredicted RBP9.06□□□□□ -0.96
MTHFD1-210ENST00000555252 GMPPAQ96IJ6 420 aaPredicted RBP9.06□□□□□ -0.96
MTHFD1-210ENST00000555252 OR4C12Q96R67 309 aa9.06□□□□□ -0.96
MTHFD1-210ENST00000555252 TXNDC17Q9BRA2 123 aa9.06□□□□□ -0.96
MTHFD1-210ENST00000555252 LIN7CQ9NUP9 197 aaKnown RBP9.06□□□□□ -0.96
MTHFD1-210ENST00000555252 COL27A1Q8IZC6 1860 aaPredicted RBP9.05□□□□□ -0.96
MTHFD1-210ENST00000555252 PDE6DO43924 150 aa9.05□□□□□ -0.96
MTHFD1-210ENST00000555252 HPRT1P00492 218 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms