RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 NFYBP25208 207 aa9.4□□□□□ -0.9
SRP54-205ENST00000554803 NTF4P34130 210 aa9.4□□□□□ -0.9
SRP54-205ENST00000554803 MDH2P40926 338 aaKnown RBP9.4□□□□□ -0.9
SRP54-205ENST00000554803 RPL23AP62750 156 aaKnown RBP9.4□□□□□ -0.9
SRP54-205ENST00000554803 ID3Q02535 119 aa9.4□□□□□ -0.9
SRP54-205ENST00000554803 ZNF92Q03936 586 aa9.4□□□□□ -0.9
SRP54-205ENST00000554803 ZNF506Q5JVG8 444 aa9.4□□□□□ -0.9
SRP54-205ENST00000554803 SLC35G3Q8N808 338 aa9.4□□□□□ -0.9
SRP54-205ENST00000554803 TRIB1Q96RU8 372 aa9.4□□□□□ -0.9
SRP54-205ENST00000554803 SFXN3Q9BWM7 321 aa9.4□□□□□ -0.9
SRP54-205ENST00000554803 WNT5BQ9H1J7 359 aa9.4□□□□□ -0.9
SRP54-205ENST00000554803 OR51M1Q9H341 326 aa9.4□□□□□ -0.9
SRP54-205ENST00000554803 CRLF2Q9HC73 371 aa9.4□□□□□ -0.9
SRP54-205ENST00000554803 GPR35Q9HC97 309 aa9.4□□□□□ -0.9
SRP54-205ENST00000554803 Q9N2K0 584 aa9.4□□□□□ -0.9
SRP54-205ENST00000554803 PRR13Q9NZ81 148 aa9.4□□□□□ -0.9
SRP54-205ENST00000554803 TREM2Q9NZC2 230 aa9.4□□□□□ -0.9
SRP54-205ENST00000554803 CLCF1Q9UBD9 225 aa9.4□□□□□ -0.9
SRP54-205ENST00000554803 ATP23Q9Y6H3 246 aa9.4□□□□□ -0.9
SRP54-205ENST00000554803 MALRD1Q5VYJ5 2156 aa9.4□□□□□ -0.91
SRP54-205ENST00000554803 IGKV1-27A0A075B6S5 117 aa9.39□□□□□ -0.91
SRP54-205ENST00000554803 OR5B21A6NL26 309 aa9.39□□□□□ -0.91
SRP54-205ENST00000554803 DEFB108AA8MXU0 73 aa9.39□□□□□ -0.91
SRP54-205ENST00000554803 RNF223E7ERA6 249 aa9.39□□□□□ -0.91
SRP54-205ENST00000554803 WRBO00258 174 aa9.39□□□□□ -0.91
SRP54-205ENST00000554803 MSTNO14793 375 aa9.39□□□□□ -0.91
SRP54-205ENST00000554803 AGPAT2O15120 278 aa9.39□□□□□ -0.91
SRP54-205ENST00000554803 DEGS1O15121 323 aa9.39□□□□□ -0.91
SRP54-205ENST00000554803 EIF3GO75821 320 aaKnown RBP eCLIP9.39□□□□□ -0.91
SRP54-205ENST00000554803 IFNA5P01569 189 aa9.39□□□□□ -0.91
SRP54-205ENST00000554803 SNRNP70P08621 437 aaKnown RBP9.39□□□□□ -0.91
SRP54-205ENST00000554803 DBHP09172 617 aa9.39□□□□□ -0.91
SRP54-205ENST00000554803 APLNRP35414 380 aa9.39□□□□□ -0.91
SRP54-205ENST00000554803 ARR3P36575 388 aa9.39□□□□□ -0.91
SRP54-205ENST00000554803 TAS2R30P59541 319 aa9.39□□□□□ -0.91
SRP54-205ENST00000554803 FXYD4P59646 89 aa9.39□□□□□ -0.91
SRP54-205ENST00000554803 PSG4Q00888 419 aa9.39□□□□□ -0.91
SRP54-205ENST00000554803 NMSQ5H8A3 153 aa9.39□□□□□ -0.91
SRP54-205ENST00000554803 AKR1C8PQ5T2L2 129 aa9.39□□□□□ -0.91
SRP54-205ENST00000554803 ZNF774Q6NX45 483 aa9.39□□□□□ -0.91
SRP54-205ENST00000554803 H1FOOQ8IZA3 346 aaPredicted RBP9.39□□□□□ -0.91
SRP54-205ENST00000554803 ZNF611Q8N823 705 aa9.39□□□□□ -0.91
SRP54-205ENST00000554803 OR5A2Q8NGI9 324 aa9.39□□□□□ -0.91
SRP54-205ENST00000554803 OR5L1Q8NGL2 311 aa9.39□□□□□ -0.91
SRP54-205ENST00000554803 OR2G3Q8NGZ4 309 aa9.39□□□□□ -0.91
SRP54-205ENST00000554803 FAM213BQ8TBF2 198 aa9.39□□□□□ -0.91
SRP54-205ENST00000554803 WNT2BQ93097 391 aa9.39□□□□□ -0.91
SRP54-205ENST00000554803 LSM10Q969L4 123 aaKnown RBP9.39□□□□□ -0.91
SRP54-205ENST00000554803 APOBEC3DQ96AK3 386 aaPredicted RBP9.39□□□□□ -0.91
SRP54-205ENST00000554803 P2RX4Q99571 388 aa9.39□□□□□ -0.91
SRP54-205ENST00000554803 ATP5SQ99766 215 aa9.39□□□□□ -0.91
SRP54-205ENST00000554803 NIPSNAP3BQ9BS92 247 aa9.39□□□□□ -0.91
SRP54-205ENST00000554803 HDHD3Q9BSH5 251 aaPredicted RBP9.39□□□□□ -0.91
SRP54-205ENST00000554803 PSMG3Q9BT73 122 aaPredicted RBP9.39□□□□□ -0.91
SRP54-205ENST00000554803 SMIM3Q9BZL3 60 aa9.39□□□□□ -0.91
SRP54-205ENST00000554803 ELOA3CA0A087WX78 387 aaPredicted RBP9.38□□□□□ -0.91
SRP54-205ENST00000554803 SLC22A20A6NK97 555 aa9.38□□□□□ -0.91
SRP54-205ENST00000554803 PCP4L1A6NKN8 68 aa9.38□□□□□ -0.91
SRP54-205ENST00000554803 C9JQL5 133 aa9.38□□□□□ -0.91
SRP54-205ENST00000554803 FAM90A26D6RGX4 464 aa9.38□□□□□ -0.91
SRP54-205ENST00000554803 ANGPTL7O43827 346 aa9.38□□□□□ -0.91
SRP54-205ENST00000554803 SOX15O60248 233 aa9.38□□□□□ -0.91
SRP54-205ENST00000554803 OR7C1O76099 320 aaPredicted RBP9.38□□□□□ -0.91
SRP54-205ENST00000554803 OR2C1O95371 312 aa9.38□□□□□ -0.91
SRP54-205ENST00000554803 LY86O95711 162 aa9.38□□□□□ -0.91
SRP54-205ENST00000554803 IFNA1P01562 189 aa9.38□□□□□ -0.91
SRP54-205ENST00000554803 ACAA1P09110 424 aaPredicted RBP9.38□□□□□ -0.91
SRP54-205ENST00000554803 MMP7P09237 267 aaPredicted RBP9.38□□□□□ -0.91
SRP54-205ENST00000554803 NPBWR2P48146 333 aa9.38□□□□□ -0.91
SRP54-205ENST00000554803 SNRPEP62304 92 aaKnown RBP9.38□□□□□ -0.91
SRP54-205ENST00000554803 SERF2P84101 59 aa9.38□□□□□ -0.91
SRP54-205ENST00000554803 MSMO1Q15800 293 aa9.38□□□□□ -0.91
SRP54-205ENST00000554803 CEACAM21Q3KPI0 293 aa9.38□□□□□ -0.91
SRP54-205ENST00000554803 PHLDA2Q53GA4 152 aa9.38□□□□□ -0.91
SRP54-205ENST00000554803 TUSC5Q8IXB3 177 aa9.38□□□□□ -0.91
SRP54-205ENST00000554803 Q8IYB0 196 aa9.38□□□□□ -0.91
SRP54-205ENST00000554803 SELENOHQ8IZQ5 122 aaKnown RBP9.38□□□□□ -0.91
SRP54-205ENST00000554803 TMEM252Q8N6L7 170 aa9.38□□□□□ -0.91
SRP54-205ENST00000554803 C9orf106Q8NAJ2 232 aa9.38□□□□□ -0.91
SRP54-205ENST00000554803 PINX1Q96BK5 328 aaKnown RBP9.38□□□□□ -0.91
SRP54-205ENST00000554803 TVP23CQ96ET8 276 aa9.38□□□□□ -0.91
SRP54-205ENST00000554803 HIST1H2AAQ96QV6 131 aa9.38□□□□□ -0.91
SRP54-205ENST00000554803 PRRG4Q9BZD6 226 aa9.38□□□□□ -0.91
SRP54-205ENST00000554803 PKIBQ9C010 78 aa9.38□□□□□ -0.91
SRP54-205ENST00000554803 WFDC1Q9HC57 220 aa9.38□□□□□ -0.91
SRP54-205ENST00000554803 PLA2G2EQ9NZK7 142 aa9.38□□□□□ -0.91
SRP54-205ENST00000554803 CDC42EP3Q9UKI2 254 aa9.38□□□□□ -0.91
SRP54-205ENST00000554803 MPC1Q9Y5U8 109 aa9.38□□□□□ -0.91
SRP54-205ENST00000554803 WSB1Q9Y6I7 421 aa9.38□□□□□ -0.91
SRP54-205ENST00000554803 PRR14LQ5THK1 2151 aa9.38□□□□□ -0.91
SRP54-205ENST00000554803 IGKV1-12A0A0C4DH73 117 aa9.37□□□□□ -0.91
SRP54-205ENST00000554803 C5orf63A6NC05 138 aa9.37□□□□□ -0.91
SRP54-205ENST00000554803 TRAPPC2LH3BP13 241 aa9.37□□□□□ -0.91
SRP54-205ENST00000554803 IGKV1D-12P01611 117 aa9.37□□□□□ -0.91
SRP54-205ENST00000554803 ATP6V0CP27449 155 aa9.37□□□□□ -0.91
SRP54-205ENST00000554803 GNRHRP30968 328 aa9.37□□□□□ -0.91
SRP54-205ENST00000554803 CLEC12BQ2HXU8 276 aa9.37□□□□□ -0.91
SRP54-205ENST00000554803 CEACAM16Q2WEN9 425 aa9.37□□□□□ -0.91
SRP54-205ENST00000554803 HEPN1Q6WQI6 88 aa9.37□□□□□ -0.91
SRP54-205ENST00000554803 P4HA3Q7Z4N8 544 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 495.8 ms