RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 RSU1Q15404 277 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 C2orf68Q2NKX9 166 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 MPV17LQ2QL34 196 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 SLC22A6Q4U2R8 563 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 TPTE2P1Q5T6R2 138 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 GFI1BQ5VTD9 330 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 RNLSQ5VYX0 342 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 OR52W1Q6IF63 320 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 FAM53AQ6NSI3 398 aaPredicted RBP3.29□□□□□ -1.88
VTI1B-203ENST00000554636 LINC00596Q86U02 117 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 ABHD12Q8N2K0 398 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 OSR2Q8N2R0 312 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 BPIFB6Q8NFQ5 453 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 OR4D6Q8NGJ1 314 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 OR9G1Q8NH87 305 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 OR2T6Q8NHC8 308 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 ZNF596Q8TC21 504 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 MRGPRDQ8TDS7 321 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 RNF183Q96D59 192 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 DERL3Q96Q80 235 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 ZNF184Q99676 751 aaPredicted RBP3.29□□□□□ -1.88
VTI1B-203ENST00000554636 METTL9Q9H1A3 318 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 MMP28Q9H239 520 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 PAK1IP1Q9NWT1 392 aaPredicted RBP3.29□□□□□ -1.88
VTI1B-203ENST00000554636 CHCHD3Q9NX63 227 aaKnown RBP3.29□□□□□ -1.88
VTI1B-203ENST00000554636 IDI2-AS1Q9NZ38 188 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 DPM3Q9P2X0 92 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 ING4Q9UNL4 249 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 ST3GAL6Q9Y274 331 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 PAM16Q9Y3D7 125 aa3.29□□□□□ -1.88
VTI1B-203ENST00000554636 SAA2-SAA4A0A096LPE2 208 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 A0A1W2PPI3 338 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 SH2D7A6NKC9 451 aaPredicted RBP3.28□□□□□ -1.88
VTI1B-203ENST00000554636 FAM90A12PA8MX19 464 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 LEUTXA8MZ59 168 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 OOSP1A8MZH6 123 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 BUB1B-PAK6H3BSN5 160 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 J3QR06 171 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 ZNF780AO75290 641 aaPredicted RBP3.28□□□□□ -1.88
VTI1B-203ENST00000554636 SC5DO75845 299 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 OR7C1O76099 320 aaPredicted RBP3.28□□□□□ -1.88
VTI1B-203ENST00000554636 OR2F2O95006 317 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 IGHV3-7P01780 117 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 MT-ND4P03905 459 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 CD28P10747 220 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 GTF2F2P13984 249 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 CELP19835 753 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 MYF6P23409 242 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 CD24P25063 80 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 NFYBP25208 207 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 MT3P25713 68 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 VDAC2P45880 294 aaPredicted RBP3.28□□□□□ -1.88
VTI1B-203ENST00000554636 GNG10P50151 68 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 BLCAPP62952 87 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 SLC35A2P78381 396 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 DEFA6Q01524 100 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 DIAPH2-AS1Q14236 149 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 LTC4SQ16873 150 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 C6orf141Q5SZD1 244 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 FAM27D1Q5T7N8 215 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 SIGIRRQ6IA17 410 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 GLIPR1L1Q6UWM5 242 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 UNQ9370/PRO34162Q6UXP9 181 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 ZNF497Q6ZNH5 498 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 LRRTM1Q86UE6 522 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 CDH26Q8IXH8 852 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 GAPTQ8N292 157 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 STX19Q8N4C7 294 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 JAGN1Q8N5M9 183 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 DRAM1Q8N682 238 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 NKAIN3Q8N8D7 197 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 TMEM104Q8NE00 496 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 OR10A7Q8NGE5 316 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 UBALD1Q8TB05 177 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 LEAP2Q969E1 77 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 TOMM40LQ969M1 308 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 RPEQ96AT9 228 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 RBM14Q96PK6 669 aaKnown RBP3.28□□□□□ -1.88
VTI1B-203ENST00000554636 OR5M11Q96RB7 305 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 MND1Q9BWT6 205 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 BARHL1Q9BZE3 327 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 VCXQ9H320 206 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 BANF2Q9H503 90 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 DCLRE1BQ9H816 532 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 CKLFQ9UBR5 152 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 PITPNC1Q9UKF7 332 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 PSG11Q9UQ72 335 aa3.28□□□□□ -1.88
VTI1B-203ENST00000554636 MRPS28Q9Y2Q9 187 aaKnown RBP3.28□□□□□ -1.88
VTI1B-203ENST00000554636 AMMECR1Q9Y4X0 333 aaPredicted RBP3.28□□□□□ -1.88
VTI1B-203ENST00000554636 HUWE1Q7Z6Z7 4374 aaKnown RBP3.27□□□□□ -1.89
VTI1B-203ENST00000554636 DNAH7Q8WXX0 4024 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 IGLV5-37A0A075B6J1 123 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 A0A0A6YYD4 124 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 IGHV3-43A0A0B4J1X8 118 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 A0A1W2PPE3 182 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 FAM90A7PA6NKC0 464 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 FAM90A23PA8MXZ1 464 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 C12orf77C9JDV5 145 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 AIPO00170 330 aa3.27□□□□□ -1.89
VTI1B-203ENST00000554636 SDCBPO00560 298 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms