RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 EIF3KQ9UBQ5 218 aaKnown RBP4.51□□□□□ -1.69
ATXN3-226ENST00000554350 UBQLN2Q9UHD9 624 aa4.51□□□□□ -1.69
ATXN3-226ENST00000554350 SHPKQ9UHJ6 478 aa4.51□□□□□ -1.69
ATXN3-226ENST00000554350 FLVCR2Q9UPI3 526 aa4.51□□□□□ -1.69
ATXN3-226ENST00000554350 TSSC4Q9Y5U2 329 aaPredicted RBP4.51□□□□□ -1.69
ATXN3-226ENST00000554350 LHFPL6Q9Y693 200 aa4.51□□□□□ -1.69
ATXN3-226ENST00000554350 A0A0D9SG52 128 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 RFPL4AA6NLU0 287 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 F5H5P2 479 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 RFPL4AL1F8VTS6 287 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 TMEM178BH3BS89 294 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 AP4M1O00189 453 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 NPFFO15130 113 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 TIMM8AO60220 97 aaPredicted RBP4.5□□□□□ -1.69
ATXN3-226ENST00000554350 MTRF1O75570 445 aaKnown RBP4.5□□□□□ -1.69
ATXN3-226ENST00000554350 B3GALNT1O75752 331 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 KDM4BO94953 1096 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 CYB5R3P00387 301 aaPredicted RBP4.5□□□□□ -1.69
ATXN3-226ENST00000554350 LHBP01229 141 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 CD3DP04234 171 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 SERPINA5P05154 406 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 LIPFP07098 398 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 OR4E1P0C645 316 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 SLC25A4P12235 298 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 RPA2P15927 270 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 MSR1P21757 451 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 CPT2P23786 658 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 S100A11P31949 105 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 ZNF93P35789 620 aaPredicted RBP4.5□□□□□ -1.69
ATXN3-226ENST00000554350 GNALP38405 381 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 VDAC2P45880 294 aaPredicted RBP4.5□□□□□ -1.69
ATXN3-226ENST00000554350 P2RX3P56373 397 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 TAS2R31P59538 309 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 TSPAN5P62079 268 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 FMODQ06828 376 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 ZNF345Q14585 488 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 SURF2Q15527 256 aaPredicted RBP4.5□□□□□ -1.69
ATXN3-226ENST00000554350 GFOD2Q3B7J2 385 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 RNASE10Q5GAN6 216 aaKnown RBP4.5□□□□□ -1.69
ATXN3-226ENST00000554350 NHLRC3Q5JS37 347 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 FAM27BQ5VT28 67 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 LIN54Q6MZP7 749 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 LYPD2Q6UXB3 125 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 RFPL4BQ6ZWI9 263 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 SLC16A14Q7RTX9 510 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 VMO1Q7Z5L0 202 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 NAA40Q86UY6 237 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 SLC25A42Q86VD7 318 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 ZNF584Q8IVC4 421 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 KDM8Q8N371 416 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 FTMTQ8N4E7 242 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 C12orf45Q8N5I9 185 aaPredicted RBP4.5□□□□□ -1.69
ATXN3-226ENST00000554350 JAGN1Q8N5M9 183 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 BEST4Q8NFU0 473 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 OR56B1Q8NGI3 324 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 OR4D6Q8NGJ1 314 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 OR52H1Q8NGJ2 320 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 OR1J2Q8NGS2 313 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 OR10R2Q8NGX6 335 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 FGGYQ96C11 551 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 CPNE2Q96FN4 548 aaPredicted RBP4.5□□□□□ -1.69
ATXN3-226ENST00000554350 URM1Q9BTM9 101 aaKnown RBP4.5□□□□□ -1.69
ATXN3-226ENST00000554350 FAM234AQ9H0X4 552 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 SIRPDQ9H106 197 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 CST11Q9H112 138 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 DNTTIP1Q9H147 329 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 ZNF702PQ9H963 129 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 MRPL15Q9P015 296 aaKnown RBP4.5□□□□□ -1.69
ATXN3-226ENST00000554350 ONECUT1Q9UBC0 465 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 ATPIF1Q9UII2 106 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 GTF2A1LQ9UNN4 478 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 V9GYS6 101 aa4.5□□□□□ -1.69
ATXN3-226ENST00000554350 RPS10-NUDT3A0A1W2PQS6 291 aa4.49□□□□□ -1.69
ATXN3-226ENST00000554350 SERPINE3A8MV23 424 aa4.49□□□□□ -1.69
ATXN3-226ENST00000554350 LEUTXA8MZ59 168 aa4.49□□□□□ -1.69
ATXN3-226ENST00000554350 SMLR1H3BR10 107 aa4.49□□□□□ -1.69
ATXN3-226ENST00000554350 L7N2F9 121 aa4.49□□□□□ -1.69
ATXN3-226ENST00000554350 CHST1O43916 411 aa4.49□□□□□ -1.69
ATXN3-226ENST00000554350 DHRS3O75911 302 aa4.49□□□□□ -1.69
ATXN3-226ENST00000554350 OR2F2O95006 317 aa4.49□□□□□ -1.69
ATXN3-226ENST00000554350 FCER2P06734 321 aa4.49□□□□□ -1.69
ATXN3-226ENST00000554350 CD55P08174 381 aa4.49□□□□□ -1.69
ATXN3-226ENST00000554350 CST2P09228 141 aa4.49□□□□□ -1.69
ATXN3-226ENST00000554350 FRMD6-AS1P0C7T7 363 aa4.49□□□□□ -1.69
ATXN3-226ENST00000554350 DUX4L4P0CJ87 422 aa4.49□□□□□ -1.69
ATXN3-226ENST00000554350 RRASP10301 218 aa4.49□□□□□ -1.69
ATXN3-226ENST00000554350 ANXA7P20073 488 aaKnown RBP4.49□□□□□ -1.69
ATXN3-226ENST00000554350 ZBTB25P24278 435 aa4.49□□□□□ -1.69
ATXN3-226ENST00000554350 PMELP40967 661 aa4.49□□□□□ -1.69
ATXN3-226ENST00000554350 CSNK1A1P48729 337 aa4.49□□□□□ -1.69
ATXN3-226ENST00000554350 ZNF84P51523 738 aa4.49□□□□□ -1.69
ATXN3-226ENST00000554350 LUMP51884 338 aaPredicted RBP4.49□□□□□ -1.69
ATXN3-226ENST00000554350 CYCSP99999 105 aaKnown RBP4.49□□□□□ -1.69
ATXN3-226ENST00000554350 PLA2G7Q13093 441 aa4.49□□□□□ -1.69
ATXN3-226ENST00000554350 UNC119Q13432 240 aa4.49□□□□□ -1.69
ATXN3-226ENST00000554350 OR2F1Q13607 317 aa4.49□□□□□ -1.69
ATXN3-226ENST00000554350 EXOSC2Q13868 293 aaKnown RBP4.49□□□□□ -1.69
ATXN3-226ENST00000554350 TAF13Q15543 124 aa4.49□□□□□ -1.69
ATXN3-226ENST00000554350 TWIST1Q15672 202 aa4.49□□□□□ -1.69
ATXN3-226ENST00000554350 ODF4Q2M2E3 257 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms