RNA–Protein interactions for RNA: ENST00000553617.5

TDP1-207, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-207ENST00000553617 TMEM38BQ9NVV0 291 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 MRPL27Q9P0M9 148 aaKnown RBP2.71□□□□□ -1.98
TDP1-207ENST00000553617 ZFP30Q9Y2G7 519 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 F11RQ9Y624 299 aaKnown RBP2.71□□□□□ -1.98
TDP1-207ENST00000553617 NISCHQ9Y2I1 1504 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 BRCA1P38398 1863 aaKnown RBP2.71□□□□□ -1.98
TDP1-207ENST00000553617 LTBP1Q14766 1721 aa2.71□□□□□ -1.98
TDP1-207ENST00000553617 EIF4G3O43432 1585 aaKnown RBP2.7□□□□□ -1.98
TDP1-207ENST00000553617 LRP4O75096 1905 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 CAMTA1Q9Y6Y1 1673 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 NOS1P29475 1434 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 CEP162Q5TB80 1403 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 DOCK3Q8IZD9 2030 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 WDR62O43379 1518 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 TRAV8-2A0A0B4J237 113 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 A0A1B0GX51 115 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 GMNCA6NCL1 334 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 RBFOX3A6NFN3 312 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 D6RAR5 112 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 LINC01619G3V211 115 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 H7C1C5 153 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 J3QT63 122 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 PEX7O00628 323 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 UPK1BO75841 260 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 TNFSF13O75888 250 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 OR5H8P0DN80 308 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 SPNP16150 400 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 ORM2P19652 201 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 KDELR1P24390 212 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 NPY1RP25929 384 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 AGTR1P30556 359 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 RBMXP38159 391 aaKnown RBP2.7□□□□□ -1.98
TDP1-207ENST00000553617 CTRLP40313 264 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 RND2P52198 227 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 TAS2R30P59541 319 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 LCN6P62502 163 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 HBG1P69891 147 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 HBG2P69892 147 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 HIST1H1AQ02539 215 aaPredicted RBP2.7□□□□□ -1.98
TDP1-207ENST00000553617 DAZ2Q13117 558 aaKnown RBP2.7□□□□□ -1.98
TDP1-207ENST00000553617 PRDX4Q13162 271 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 C1DQ13901 141 aaKnown RBP2.7□□□□□ -1.98
TDP1-207ENST00000553617 BATFQ16520 125 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 IL17AQ16552 155 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 TMEM69Q5SWH9 247 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 SPATA31B1PQ5VZV4 182 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 SPINK14Q6IE38 97 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 ACP7Q6ZNF0 438 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 DGAT2L6Q6ZPD8 337 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 LINC01551Q86U37 167 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 C8orf59Q8N0T1 100 aaPredicted RBP2.7□□□□□ -1.98
TDP1-207ENST00000553617 ACBD7Q8N6N7 88 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 OR11H6Q8NGC7 330 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 OR5A1Q8NGJ0 315 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 ZFP90Q8TF47 636 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 THEM6Q8WUY1 208 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 DCAKDQ8WVC6 231 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 RXFP2Q8WXD0 754 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 OR5P3Q8WZ94 311 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 ROPN1LQ96C74 230 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 SLC35E1Q96K37 410 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 SULT4A1Q9BR01 284 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 GABARAPL3Q9BY60 117 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 LINC00470Q9BZP3 86 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 LPAR5Q9H1C0 372 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 OR51I2Q9H344 312 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 POPDC3Q9HBV1 291 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 DAZ3Q9NR90 486 aaKnown RBP2.7□□□□□ -1.98
TDP1-207ENST00000553617 MMP26Q9NRE1 261 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 RSL24D1Q9UHA3 163 aaKnown RBP2.7□□□□□ -1.98
TDP1-207ENST00000553617 VAX2Q9UIW0 290 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 ERG28Q9UKR5 140 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 TRAPPC2LQ9UL33 140 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 ST3GAL6Q9Y274 331 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 ZNF257Q9Y2Q1 563 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 NCAPD3P42695 1498 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 TTC37Q6PGP7 1564 aa2.7□□□□□ -1.98
TDP1-207ENST00000553617 MIA2Q96PC5 1412 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 ZNF850A8MQ14 1090 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 M0R2Z0 102 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 CORTO00230 105 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 TRAF3IP2O43734 574 aaPredicted RBP2.69□□□□□ -1.98
TDP1-207ENST00000553617 OR7C2O60412 319 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 NDUFC2O95298 119 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 PTHP01270 115 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 OR4A8P0C604 315 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 CRISP2P16562 243 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 RPL7P18124 248 aaKnown RBP2.69□□□□□ -1.98
TDP1-207ENST00000553617 KLK2P20151 261 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 AZU1P20160 251 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 FGF7P21781 194 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 ZBTB25P24278 435 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 BLVRBP30043 206 aaPredicted RBP2.69□□□□□ -1.98
TDP1-207ENST00000553617 CMPK1P30085 196 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 NCBP2P52298 156 aaKnown RBP eCLIP2.69□□□□□ -1.981e-7■■■■□ 26
TDP1-207ENST00000553617 MTPNP58546 118 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 LYZP61626 148 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 NCS1P62166 190 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 RGNQ15493 299 aa2.69□□□□□ -1.98
TDP1-207ENST00000553617 ZNF239Q16600 458 aaKnown RBP2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms