RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 TAF9BQ9HBM6 251 aa10.68□□□□□ -0.7
VPS29-209ENST00000551655 MBNL3Q9NUK0 354 aaKnown RBP10.68□□□□□ -0.7
VPS29-209ENST00000551655 RCC2Q9P258 522 aaKnown RBP10.68□□□□□ -0.7
VPS29-209ENST00000551655 A0A0B4J203 849 aa10.67□□□□□ -0.7
VPS29-209ENST00000551655 IGLL5B9A064 214 aa10.67□□□□□ -0.7
VPS29-209ENST00000551655 H0YJW9 148 aa10.67□□□□□ -0.7
VPS29-209ENST00000551655 GNGT2O14610 69 aa10.67□□□□□ -0.7
VPS29-209ENST00000551655 ST8SIA5O15466 376 aa10.67□□□□□ -0.7
VPS29-209ENST00000551655 RAP2AP10114 183 aa10.67□□□□□ -0.7
VPS29-209ENST00000551655 SERPINA2P20848 420 aa10.67□□□□□ -0.7
VPS29-209ENST00000551655 MS4A2Q01362 244 aa10.67□□□□□ -0.7
VPS29-209ENST00000551655 PJVKQ0ZLH3 352 aa10.67□□□□□ -0.7
VPS29-209ENST00000551655 RIPK1Q13546 671 aa10.67□□□□□ -0.7
VPS29-209ENST00000551655 C6orf183Q5T699 404 aa10.67□□□□□ -0.7
VPS29-209ENST00000551655 ASCL4Q6XD76 172 aa10.67□□□□□ -0.7
VPS29-209ENST00000551655 ZNF645Q8N7E2 425 aa10.67□□□□□ -0.7
VPS29-209ENST00000551655 COA4Q9NYJ1 87 aa10.67□□□□□ -0.7
VPS29-209ENST00000551655 OR4C45A6NMZ5 311 aa10.66□□□□□ -0.7
VPS29-209ENST00000551655 H3BNX3 289 aa10.66□□□□□ -0.7
VPS29-209ENST00000551655 IFNA4P05014 189 aa10.66□□□□□ -0.7
VPS29-209ENST00000551655 ANXA8P13928 327 aa10.66□□□□□ -0.7
VPS29-209ENST00000551655 FCGR2BP31994 310 aaPredicted RBP10.66□□□□□ -0.7
VPS29-209ENST00000551655 APOC4P55056 127 aa10.66□□□□□ -0.7
VPS29-209ENST00000551655 GK3PQ14409 553 aa10.66□□□□□ -0.7
VPS29-209ENST00000551655 TMEM30BQ3MIR4 351 aa10.66□□□□□ -0.7
VPS29-209ENST00000551655 NHLRC3Q5JS37 347 aa10.66□□□□□ -0.7
VPS29-209ENST00000551655 DHFR2Q86XF0 187 aa10.66□□□□□ -0.7
VPS29-209ENST00000551655 GID4Q8IVV7 300 aa10.66□□□□□ -0.7
VPS29-209ENST00000551655 STX19Q8N4C7 294 aa10.66□□□□□ -0.7
VPS29-209ENST00000551655 KCNG3Q8TAE7 436 aa10.66□□□□□ -0.7
VPS29-209ENST00000551655 C11orf45Q8TAV5 145 aa10.66□□□□□ -0.7
VPS29-209ENST00000551655 ELAC2Q9BQ52 826 aaKnown RBP10.66□□□□□ -0.7
VPS29-209ENST00000551655 MLXQ9UH92 298 aa10.66□□□□□ -0.7
VPS29-209ENST00000551655 UBQLN2Q9UHD9 624 aa10.66□□□□□ -0.7
VPS29-209ENST00000551655 PPP5D1E7EU14 171 aa10.65□□□□□ -0.7
VPS29-209ENST00000551655 SLC22A1O15245 554 aa10.65□□□□□ -0.7
VPS29-209ENST00000551655 SNX3O60493 162 aa10.65□□□□□ -0.7
VPS29-209ENST00000551655 PRH1P02810 166 aa10.65□□□□□ -0.7
VPS29-209ENST00000551655 HTR1AP08908 422 aa10.65□□□□□ -0.7
VPS29-209ENST00000551655 LINC00205P59089 165 aa10.65□□□□□ -0.7
VPS29-209ENST00000551655 EXOSC2Q13868 293 aaKnown RBP10.65□□□□□ -0.7
VPS29-209ENST00000551655 SERPINA12Q8IW75 414 aa10.65□□□□□ -0.7
VPS29-209ENST00000551655 ADGRG5Q8IZF4 528 aa10.65□□□□□ -0.7
VPS29-209ENST00000551655 OR5D14Q8NGL3 314 aa10.65□□□□□ -0.7
VPS29-209ENST00000551655 GHSRQ92847 366 aa10.65□□□□□ -0.7
VPS29-209ENST00000551655 TECRQ9NZ01 308 aaKnown RBP10.65□□□□□ -0.7
VPS29-209ENST00000551655 WARS2Q9UGM6 360 aaKnown RBP10.65□□□□□ -0.7
VPS29-209ENST00000551655 ZNF230Q9UIE0 474 aaPredicted RBP10.65□□□□□ -0.7
VPS29-209ENST00000551655 JPT1Q9UK76 154 aa10.65□□□□□ -0.7
VPS29-209ENST00000551655 WASHC3Q9Y3C0 194 aa10.65□□□□□ -0.7
VPS29-209ENST00000551655 FAM90A23PA8MXZ1 464 aa10.64□□□□□ -0.71
VPS29-209ENST00000551655 DEFB4AO15263 64 aa10.64□□□□□ -0.71
VPS29-209ENST00000551655 MAS1P04201 325 aa10.64□□□□□ -0.71
VPS29-209ENST00000551655 IGKV1-16P04430 117 aa10.64□□□□□ -0.71
VPS29-209ENST00000551655 RPL35AP18077 110 aaKnown RBP10.64□□□□□ -0.71
VPS29-209ENST00000551655 ATP6V1E1P36543 226 aa10.64□□□□□ -0.71
VPS29-209ENST00000551655 MPV17LQ2QL34 196 aa10.64□□□□□ -0.71
VPS29-209ENST00000551655 ZNF57Q68EA5 555 aaPredicted RBP10.64□□□□□ -0.71
VPS29-209ENST00000551655 C12orf73Q69YU5 71 aa10.64□□□□□ -0.71
VPS29-209ENST00000551655 DMKNQ6E0U4 476 aaPredicted RBP10.64□□□□□ -0.71
VPS29-209ENST00000551655 FDX2Q6P4F2 183 aa10.64□□□□□ -0.71
VPS29-209ENST00000551655 ZDHHC13Q8IUH4 622 aa10.64□□□□□ -0.71
VPS29-209ENST00000551655 PARP16Q8N5Y8 322 aa10.64□□□□□ -0.71
VPS29-209ENST00000551655 DRAXINQ8NBI3 349 aaPredicted RBP10.64□□□□□ -0.71
VPS29-209ENST00000551655 USMG5Q96IX5 58 aa10.64□□□□□ -0.71
VPS29-209ENST00000551655 METTL9Q9H1A3 318 aa10.64□□□□□ -0.71
VPS29-209ENST00000551655 RAB9BQ9NP90 201 aa10.64□□□□□ -0.71
VPS29-209ENST00000551655 AKIP1Q9NQ31 210 aa10.64□□□□□ -0.71
VPS29-209ENST00000551655 ARL8BQ9NVJ2 186 aa10.64□□□□□ -0.71
VPS29-209ENST00000551655 TAS2R4Q9NYW5 299 aa10.64□□□□□ -0.71
VPS29-209ENST00000551655 OR5H14A6NHG9 310 aa10.63□□□□□ -0.71
VPS29-209ENST00000551655 YPEL1O60688 119 aa10.63□□□□□ -0.71
VPS29-209ENST00000551655 RAB3AP20336 220 aa10.63□□□□□ -0.71
VPS29-209ENST00000551655 CBLN1P23435 193 aa10.63□□□□□ -0.71
VPS29-209ENST00000551655 LGALS7P47929 136 aa10.63□□□□□ -0.71
VPS29-209ENST00000551655 DAPP51397 102 aa10.63□□□□□ -0.71
VPS29-209ENST00000551655 OR2AK2Q8NG84 335 aa10.63□□□□□ -0.71
VPS29-209ENST00000551655 ABHD14BQ96IU4 210 aa10.63□□□□□ -0.71
VPS29-209ENST00000551655 YPEL2Q96QA6 119 aa10.63□□□□□ -0.71
VPS29-209ENST00000551655 PRRG3Q9BZD7 231 aa10.63□□□□□ -0.71
VPS29-209ENST00000551655 DMBT1Q9UGM3 2413 aaPredicted RBP10.63□□□□□ -0.71
VPS29-209ENST00000551655 UBE2QL1A1L167 161 aa10.62□□□□□ -0.71
VPS29-209ENST00000551655 MCRIP1C9JLW8 97 aa10.62□□□□□ -0.71
VPS29-209ENST00000551655 S1PR2O95136 353 aa10.62□□□□□ -0.71
VPS29-209ENST00000551655 OR2C1O95371 312 aa10.62□□□□□ -0.71
VPS29-209ENST00000551655 CCR9P51686 369 aa10.62□□□□□ -0.71
VPS29-209ENST00000551655 RHOGP84095 191 aa10.62□□□□□ -0.71
VPS29-209ENST00000551655 RAB12Q6IQ22 244 aa10.62□□□□□ -0.71
VPS29-209ENST00000551655 ZNF529Q6P280 563 aa10.62□□□□□ -0.71
VPS29-209ENST00000551655 BTNL8Q6UX41 500 aa10.62□□□□□ -0.71
VPS29-209ENST00000551655 LINC00596Q86U02 117 aa10.62□□□□□ -0.71
VPS29-209ENST00000551655 GAPTQ8N292 157 aa10.62□□□□□ -0.71
VPS29-209ENST00000551655 STPG3Q8N7X2 389 aa10.62□□□□□ -0.71
VPS29-209ENST00000551655 OR5AN1Q8NGI8 311 aa10.62□□□□□ -0.71
VPS29-209ENST00000551655 TSEN15Q8WW01 171 aaKnown RBP10.62□□□□□ -0.71
VPS29-209ENST00000551655 FAM46BQ96A09 425 aa10.62□□□□□ -0.71
VPS29-209ENST00000551655 PELI1Q96FA3 418 aa10.62□□□□□ -0.71
VPS29-209ENST00000551655 MFFQ9GZY8 342 aa10.62□□□□□ -0.71
VPS29-209ENST00000551655 IL36GQ9NZH8 169 aa10.62□□□□□ -0.71
VPS29-209ENST00000551655 ENOPH1Q9UHY7 261 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms