RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 PRKACAP17612 351 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 CCL1P22362 96 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 MAGEA2P43356 314 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 CBX5P45973 191 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 NPBWR2P48146 333 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 NUDT2P50583 147 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 FUT6P51993 359 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 CDC42P60953 191 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 PSME3P61289 254 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 CDK5Q00535 292 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 MFGE8Q08431 387 aaPredicted RBP2.7□□□□□ -1.98
LIMA1-206ENST00000550611 EDDM3AQ14507 147 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 SPCS2Q15005 226 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 RBMY1FQ15415 496 aaKnown RBP2.7□□□□□ -1.98
LIMA1-206ENST00000550611 UBE2V2Q15819 145 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 SLC35D3Q5M8T2 416 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 SAMD4BQ5PRF9 694 aaKnown RBP2.7□□□□□ -1.98
LIMA1-206ENST00000550611 FAM27D1Q5T7N8 215 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 SLX4IPQ5VYV7 408 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 Q6P435 159 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 FAM122CQ6P4D5 195 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 LINC00322Q6ZN03 302 aaPredicted RBP2.7□□□□□ -1.98
LIMA1-206ENST00000550611 TGIF2LXQ8IUE1 241 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 ENTHD1Q8IYW4 607 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 ZNF679Q8IYX0 411 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 ELMOD2Q8IZ81 293 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 OR8H3Q8N146 312 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 GBGT1Q8N5D6 347 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 ZNF491Q8N8L2 437 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 AQP11Q8NBQ7 271 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 ZNF114Q8NC26 417 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 TSPAN14Q8NG11 270 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 OR11H1Q8NG94 326 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 OR1N2Q8NGR9 330 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 OR56B4Q8NH76 319 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 OR9G1Q8NH87 305 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 THAP6Q8TBB0 222 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 DCUN1D4Q92564 292 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 DLX4Q92988 240 aaPredicted RBP2.7□□□□□ -1.98
LIMA1-206ENST00000550611 SLAMF9Q96A28 289 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 ISOC1Q96CN7 298 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 COQ2Q96H96 371 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 UBE2E2Q96LR5 201 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 MS4A10Q96PG2 267 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 GON7Q9BXV9 100 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 CHST6Q9GZX3 395 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 OR51V1Q9H2C8 321 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 VCXQ9H320 206 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 GAL3ST2Q9H3Q3 398 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 C12orf4Q9NQ89 552 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 TAS2R1Q9NYW7 299 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 RCC2Q9P258 522 aaKnown RBP2.7□□□□□ -1.98
LIMA1-206ENST00000550611 COPS3Q9UNS2 423 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 SLC7A11Q9UPY5 501 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 U3KQV3 271 aa2.7□□□□□ -1.98
LIMA1-206ENST00000550611 LRP1BQ9NZR2 4599 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 DNAH6Q9C0G6 4158 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 DMBT1Q9UGM3 2413 aaPredicted RBP2.69□□□□□ -1.98
LIMA1-206ENST00000550611 SAA2-SAA4A0A096LPE2 208 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 IGKV1-9A0A0C4DH69 117 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 IGKV1-12A0A0C4DH73 117 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 FAM230AA0A1W2PPH8 454 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 ODAMA1E959 279 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 FAM172BPA6NC97 362 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 CCDC182A6NF36 153 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 ZNF729A6NN14 1252 aaPredicted RBP2.69□□□□□ -1.98
LIMA1-206ENST00000550611 TOR1AO14656 332 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 OVOL1O14753 267 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 ATP5HO75947 161 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 CCNB2O95067 398 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 OR2H2O95918 312 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 IGKV1D-33P01593 117 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 IGKV1-33P01594 117 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 IGKV1D-12P01611 117 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 OR8U8P0C7N1 319 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 M6PRP20645 277 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 BCL3P20749 454 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 GABRR1P24046 479 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 CD1BP29016 333 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 VHLP40337 213 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 PTGFRP43088 359 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 KIR3DL2P43630 455 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 HSPA13P48723 471 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 RAB7AP51149 207 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 RIDAP52758 137 aaKnown RBP2.69□□□□□ -1.98
LIMA1-206ENST00000550611 GNB1P62873 340 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 AESQ08117 197 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 ZNF616Q08AN1 781 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 ZNF816Q0VGE8 651 aaPredicted RBP2.69□□□□□ -1.98
LIMA1-206ENST00000550611 PPP1R8Q12972 351 aaKnown RBP2.69□□□□□ -1.98
LIMA1-206ENST00000550611 HAGHQ16775 308 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 MICAQ29983 383 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 SPIN3Q5JUX0 258 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 CST9LP1Q5W188 147 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 FAM53AQ6NSI3 398 aaPredicted RBP2.69□□□□□ -1.98
LIMA1-206ENST00000550611 SLC25A26Q70HW3 274 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 SATL1Q86VE3 508 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 LYPD6Q86Y78 171 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 Q8IYB0 196 aa2.69□□□□□ -1.98
LIMA1-206ENST00000550611 FAM58AQ8N1B3 248 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms