RNA–Protein interactions for RNA: ENST00000549341.1

DEPDC4-208, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 541 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-208ENST00000549341 SFT2D2O95562 160 aa5.87□□□□□ -1.47
DEPDC4-208ENST00000549341 DUS4LO95620 317 aaKnown RBP5.87□□□□□ -1.47
DEPDC4-208ENST00000549341 LHBP01229 141 aa5.87□□□□□ -1.47
DEPDC4-208ENST00000549341 PPYP01298 95 aa5.87□□□□□ -1.47
DEPDC4-208ENST00000549341 IFNA21P01568 189 aa5.87□□□□□ -1.47
DEPDC4-208ENST00000549341 PPIAL4FP0DN26 164 aa5.87□□□□□ -1.47
DEPDC4-208ENST00000549341 PSG2P11465 335 aa5.87□□□□□ -1.47
DEPDC4-208ENST00000549341 ERP29P30040 261 aaKnown RBP5.87□□□□□ -1.47
DEPDC4-208ENST00000549341 FXYD4P59646 89 aa5.87□□□□□ -1.47
DEPDC4-208ENST00000549341 SRPXP78539 464 aa5.87□□□□□ -1.47
DEPDC4-208ENST00000549341 CYCSP99999 105 aaKnown RBP5.87□□□□□ -1.47
DEPDC4-208ENST00000549341 PAX5Q02548 391 aa5.87□□□□□ -1.47
DEPDC4-208ENST00000549341 SRSF4Q08170 494 aaKnown RBP5.87□□□□□ -1.47
DEPDC4-208ENST00000549341 ATXN7L3Q14CW9 347 aaPredicted RBP5.87□□□□□ -1.47
DEPDC4-208ENST00000549341 HFEQ30201 348 aa5.87□□□□□ -1.47
DEPDC4-208ENST00000549341 TMEM30BQ3MIR4 351 aa5.87□□□□□ -1.47
DEPDC4-208ENST00000549341 RTN4RL2Q86UN3 420 aa5.87□□□□□ -1.47
DEPDC4-208ENST00000549341 WFDC3Q8IUB2 231 aa5.87□□□□□ -1.47
DEPDC4-208ENST00000549341 GAPTQ8N292 157 aa5.87□□□□□ -1.47
DEPDC4-208ENST00000549341 GCSAMQ8N6F7 178 aa5.87□□□□□ -1.47
DEPDC4-208ENST00000549341 OR2AK2Q8NG84 335 aa5.87□□□□□ -1.47
DEPDC4-208ENST00000549341 MITD1Q8WV92 249 aa5.87□□□□□ -1.47
DEPDC4-208ENST00000549341 DYRK2Q92630 601 aa5.87□□□□□ -1.47
DEPDC4-208ENST00000549341 TOMM40LQ969M1 308 aa5.87□□□□□ -1.47
DEPDC4-208ENST00000549341 MOB3AQ96BX8 217 aa5.87□□□□□ -1.47
DEPDC4-208ENST00000549341 CABLES2Q9BTV7 478 aa5.87□□□□□ -1.47
DEPDC4-208ENST00000549341 PDCD10Q9BUL8 212 aa5.87□□□□□ -1.47
DEPDC4-208ENST00000549341 ZNF436Q9C0F3 470 aaPredicted RBP5.87□□□□□ -1.47
DEPDC4-208ENST00000549341 RANGRFQ9HD47 186 aaPredicted RBP5.87□□□□□ -1.47
DEPDC4-208ENST00000549341 MBNL3Q9NUK0 354 aaKnown RBP5.87□□□□□ -1.47
DEPDC4-208ENST00000549341 TRAV20A0A0B4J274 112 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 OR5H14A6NHG9 310 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 NPIPB11E5RHQ5 1161 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 BOLA2-SMG1P6H3BVE0 249 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 GPR31O00270 319 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 GOSR2O14653 212 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 PPIHO43447 177 aaKnown RBP5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 C1QBP02746 253 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 HPXP02790 462 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 RNASE1P07998 156 aaKnown RBP5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 VSIG10L2P0DP72 767 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 MDKP21741 143 aaPredicted RBP5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 AADACP22760 399 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 OMGP23515 440 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 ZBTB25P24278 435 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 CD80P33681 288 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 LUMP51884 338 aaPredicted RBP5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 CCL8P80075 99 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 DHODHQ02127 395 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 DHRS2Q13268 280 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 PPP1R1AQ13522 171 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 HMGN3Q15651 99 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 TEX36Q5VZQ5 186 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 GSG1LQ6UXU4 331 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 C17orf107Q6ZR85 190 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 NOXA1Q86UR1 476 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 MUC20Q8N307 709 aaPredicted RBP5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 ZBTB34Q8NCN2 500 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 NANPQ8TBE9 248 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 CASTOR1Q8WTX7 329 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 IL1F10Q8WWZ1 152 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 RAB39BQ96DA2 213 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 SDSLQ96GA7 329 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 TIMD4Q96H15 378 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 AKR1E2Q96JD6 320 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 ST6GAL2Q96JF0 529 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 KRTAP17-1Q9BYP8 105 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 SLC5A7Q9GZV3 580 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 TAF9BQ9HBM6 251 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 TMEM106BQ9NUM4 274 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 ZNF581Q9P0T4 197 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 OR2W1Q9Y3N9 320 aa5.86□□□□□ -1.47
DEPDC4-208ENST00000549341 IGHV3OR15-7A0A075B7D8 119 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 IGKV1D-8A0A087WSZ0 117 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 TRGV10A0A0A0MS01 117 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 TRBV6-7A0A0A0MS04 114 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 IGHV1-69-2A0A0G2JMI3 117 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 hADV38S2A0JD32 116 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 C5orf51A6NDU8 294 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 TMEM178BH3BS89 294 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 K7N7A8 449 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 M0QZ24 198 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 NDUFB3O43676 98 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 TSPAN15O95858 294 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 CYB5R3P00387 301 aaPredicted RBP5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 PRB2P02812 416 aaPredicted RBP5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 SCTP09683 121 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 NFYAP23511 347 aaPredicted RBP5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 PRTN3P24158 256 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 OR3A1P47881 315 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 P2RX3P56373 397 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 EDDM3BP56851 147 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 PIGPP57054 158 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 RND3P61587 244 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 AESQ08117 197 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 BAMBIQ13145 260 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 EDDM3AQ14507 147 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 LRRC10Q5BKY1 277 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 AVPI1Q5T686 147 aa5.85□□□□□ -1.47
DEPDC4-208ENST00000549341 AADACL3Q5VUY0 350 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms