RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 GPR31O00270 319 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 CREBL2O60519 120 aaPredicted RBP3.95□□□□□ -1.78
SCAF11-212ENST00000549162 GUCA1AP43080 201 aaPredicted RBP3.95□□□□□ -1.78
SCAF11-212ENST00000549162 MEOX2P50222 304 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 PRSS54Q6PEW0 395 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 MRPL21Q7Z2W9 205 aaKnown RBP3.95□□□□□ -1.78
SCAF11-212ENST00000549162 FBXL14Q8N1E6 418 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 BHLHE23Q8NDY6 225 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 OR52L2PQ8NGH6 319 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 NOL4LQ96MY1 436 aaPredicted RBP3.95□□□□□ -1.78
SCAF11-212ENST00000549162 RAB1BQ9H0U4 201 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 SRD5A3Q9H8P0 318 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 PLSCR3Q9NRY6 295 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 C1orf123Q9NWV4 160 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 CLEC5AQ9NY25 188 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 PLEK2Q9NYT0 353 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 CACNA1AO00555 2505 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 UTRNP46939 3433 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 OTOGLQ3ZCN5 2332 aa3.95□□□□□ -1.78
SCAF11-212ENST00000549162 FAM172BPA6NC97 362 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 FABP12A6NFH5 140 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 LINC01546A6NGU7 62 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 LGALS9O00182 355 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 HOXA3O43365 443 aaPredicted RBP3.94□□□□□ -1.78
SCAF11-212ENST00000549162 IGLV1-40P01703 118 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 HKR1P10072 659 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 EFNB2P52799 333 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 BSPH1Q075Z2 132 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 FAM57BQ71RH2 274 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 TMEM17Q86X19 198 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 NUDT10Q8NFP7 164 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 OR51S1Q8NGJ8 323 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 OR4C16Q8NGL9 310 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 OR5B3Q8NH48 314 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 MBD3L1Q8WWY6 194 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 DVL3Q92997 716 aaPredicted RBP3.94□□□□□ -1.78
SCAF11-212ENST00000549162 NUDT11Q96G61 164 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 ZNF714Q96N38 554 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 DAPK2Q9UIK4 370 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 TRAV14DV4A0A0A6YYC5 116 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 A0A1W2PPI3 338 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 FAM157AC9JC47 383 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 HPRT1P00492 218 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 APOHP02749 345 aaPredicted RBP3.94□□□□□ -1.78
SCAF11-212ENST00000549162 GNRHRP30968 328 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 OR10A3P58181 314 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 CD300EQ496F6 205 aaPredicted RBP3.94□□□□□ -1.78
SCAF11-212ENST00000549162 DCAF12L2Q5VW00 463 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 Q8N402 240 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 POM121L12Q8N7R1 296 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 C19orf18Q8NEA5 215 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 NEUROG1Q92886 237 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 BORCS8Q96FH0 119 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 LIME1Q9H400 295 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 GPN1Q9HCN4 374 aaPredicted RBP3.94□□□□□ -1.78
SCAF11-212ENST00000549162 A6NDX4 124 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 FAM166BA8MTA8 275 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 DFFBO76075 338 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 BCL3P20749 454 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 TALDO1P37837 337 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 LAMTOR1Q6IAA8 161 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 CHMP1BQ7LBR1 199 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 NOXA1Q86UR1 476 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.94□□□□□ -1.78
SCAF11-212ENST00000549162 SELENOHQ8IZQ5 122 aaKnown RBP3.94□□□□□ -1.78
SCAF11-212ENST00000549162 C9orf62Q8N4C0 152 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 OR4M2Q8NGB6 313 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 SLC35E1Q96K37 410 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 HYLS1Q96M11 299 aa3.94□□□□□ -1.78
SCAF11-212ENST00000549162 A0A1B0GW55 424 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 UBE2QL1A1L167 161 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 A8MWP6 167 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 CORTO00230 105 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 PROP1O75360 226 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 SFTPBP07988 381 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 DUX4L2P0CJ85 424 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 DUX4L3P0CJ86 424 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 DUX4L5P0CJ88 424 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 DUX4L6P0CJ89 424 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 DUX4L7P0CJ90 424 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 PDLIM4P50479 330 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 SFRP4Q6FHJ7 346 aaPredicted RBP3.93□□□□□ -1.78
SCAF11-212ENST00000549162 DUX4L9Q6RFH8 374 aaPredicted RBP3.93□□□□□ -1.78
SCAF11-212ENST00000549162 ACOT7LQ6ZUV0 252 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 ZNF767PQ75MW2 155 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 GATSQ8NAP1 163 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 OR52I2Q8NH67 350 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 GPR61Q9BZJ8 451 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 CYTL1Q9NRR1 136 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 DUX4Q9UBX2 424 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 hADV38S2A0JD32 116 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 BTBD17A6NE02 478 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 TRAPPC2LH3BP13 241 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 SH3BGRLO75368 114 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 FOXH1O75593 365 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 HIST1H1BP16401 226 aaKnown RBP3.93□□□□□ -1.78
SCAF11-212ENST00000549162 GCSHP23434 173 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 PRDX2P32119 198 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 NDUFA5Q16718 116 aa3.93□□□□□ -1.78
SCAF11-212ENST00000549162 CDNFQ49AH0 187 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms