RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 HCKP08631 526 aa10.54□□□□□ -0.72
CDX2-202ENST00000548877 SNRPBP14678 240 aaKnown RBP10.54□□□□□ -0.72
CDX2-202ENST00000548877 RAB3AP20336 220 aa10.54□□□□□ -0.72
CDX2-202ENST00000548877 PSMB8P28062 276 aa10.54□□□□□ -0.72
CDX2-202ENST00000548877 BDKRB2P30411 391 aa10.54□□□□□ -0.72
CDX2-202ENST00000548877 VEGFCP49767 419 aa10.54□□□□□ -0.72
CDX2-202ENST00000548877 RUNX1Q01196 453 aa10.54□□□□□ -0.72
CDX2-202ENST00000548877 ZNF816Q0VGE8 651 aaPredicted RBP10.54□□□□□ -0.72
CDX2-202ENST00000548877 PDZK1IP1Q13113 114 aa10.54□□□□□ -0.72
CDX2-202ENST00000548877 ASAH1Q13510 395 aa10.54□□□□□ -0.72
CDX2-202ENST00000548877 DIAPH2-AS1Q14236 149 aa10.54□□□□□ -0.72
CDX2-202ENST00000548877 HNF4GQ14541 408 aa10.54□□□□□ -0.72
CDX2-202ENST00000548877 KRBOX4Q5JUW0 171 aa10.54□□□□□ -0.72
CDX2-202ENST00000548877 HES5Q5TA89 166 aa10.54□□□□□ -0.72
CDX2-202ENST00000548877 ZFAND6Q6FIF0 208 aa10.54□□□□□ -0.72
CDX2-202ENST00000548877 Q6P435 159 aa10.54□□□□□ -0.72
CDX2-202ENST00000548877 IZUMO1Q8IYV9 350 aa10.54□□□□□ -0.72
CDX2-202ENST00000548877 Q8N9W7 124 aa10.54□□□□□ -0.72
CDX2-202ENST00000548877 TMEM138Q9NPI0 162 aa10.54□□□□□ -0.72
CDX2-202ENST00000548877 A0A0A6YYH2 397 aa10.53□□□□□ -0.72
CDX2-202ENST00000548877 IGKV1-9A0A0C4DH69 117 aa10.53□□□□□ -0.72
CDX2-202ENST00000548877 A6NJ64 397 aa10.53□□□□□ -0.72
CDX2-202ENST00000548877 NPIPB11E5RHQ5 1161 aa10.53□□□□□ -0.72
CDX2-202ENST00000548877 SCGNO76038 276 aa10.53□□□□□ -0.72
CDX2-202ENST00000548877 KDM4BO94953 1096 aa10.53□□□□□ -0.72
CDX2-202ENST00000548877 LY86O95711 162 aa10.53□□□□□ -0.72
CDX2-202ENST00000548877 EIF4EP06730 217 aaKnown RBP10.53□□□□□ -0.72
CDX2-202ENST00000548877 OR8U8P0C7N1 319 aa10.53□□□□□ -0.72
CDX2-202ENST00000548877 NFYBP25208 207 aa10.53□□□□□ -0.72
CDX2-202ENST00000548877 ASPHD1Q5U4P2 390 aa10.53□□□□□ -0.72
CDX2-202ENST00000548877 UTS2BQ765I0 119 aa10.53□□□□□ -0.72
CDX2-202ENST00000548877 OVCH2Q7RTZ1 564 aa10.53□□□□□ -0.72
CDX2-202ENST00000548877 OR11H1Q8NG94 326 aa10.53□□□□□ -0.72
CDX2-202ENST00000548877 OR10A7Q8NGE5 316 aa10.53□□□□□ -0.72
CDX2-202ENST00000548877 OR51T1Q8NGJ9 327 aa10.53□□□□□ -0.72
CDX2-202ENST00000548877 PTX4Q96A99 478 aa10.53□□□□□ -0.72
CDX2-202ENST00000548877 RFT1Q96AA3 541 aa10.53□□□□□ -0.72
CDX2-202ENST00000548877 FGGYQ96C11 551 aa10.53□□□□□ -0.72
CDX2-202ENST00000548877 CPNE2Q96FN4 548 aaPredicted RBP10.53□□□□□ -0.72
CDX2-202ENST00000548877 EAF1Q96JC9 268 aaPredicted RBP10.53□□□□□ -0.72
CDX2-202ENST00000548877 GFI1Q99684 422 aa10.53□□□□□ -0.72
CDX2-202ENST00000548877 PLSCR3Q9NRY6 295 aa10.53□□□□□ -0.72
CDX2-202ENST00000548877 TAS2R4Q9NYW5 299 aa10.53□□□□□ -0.72
CDX2-202ENST00000548877 PSG11Q9UQ72 335 aa10.53□□□□□ -0.72
CDX2-202ENST00000548877 IGKV1-12A0A0C4DH73 117 aa10.52□□□□□ -0.73
CDX2-202ENST00000548877 A0A1B0GVG6 124 aa10.52□□□□□ -0.73
CDX2-202ENST00000548877 I3L521 148 aa10.52□□□□□ -0.73
CDX2-202ENST00000548877 SLC33A1O00400 549 aaPredicted RBP10.52□□□□□ -0.73
CDX2-202ENST00000548877 GSTZ1O43708 216 aaPredicted RBP10.52□□□□□ -0.73
CDX2-202ENST00000548877 PFDN1O60925 122 aa10.52□□□□□ -0.73
CDX2-202ENST00000548877 IGKV1D-12P01611 117 aa10.52□□□□□ -0.73
CDX2-202ENST00000548877 IGF1P05019 195 aa10.52□□□□□ -0.73
CDX2-202ENST00000548877 PRKACBP22694 351 aa10.52□□□□□ -0.73
CDX2-202ENST00000548877 HTR2CP28335 458 aa10.52□□□□□ -0.73
CDX2-202ENST00000548877 MTCP1P56278 107 aa10.52□□□□□ -0.73
CDX2-202ENST00000548877 PAX5Q02548 391 aa10.52□□□□□ -0.73
CDX2-202ENST00000548877 KIAA0141Q14154 515 aaPredicted RBP10.52□□□□□ -0.73
CDX2-202ENST00000548877 BAK1Q16611 211 aa10.52□□□□□ -0.73
CDX2-202ENST00000548877 C1orf100Q5SVJ3 147 aa10.52□□□□□ -0.73
CDX2-202ENST00000548877 ZNF529Q6P280 563 aa10.52□□□□□ -0.73
CDX2-202ENST00000548877 LHFPL2Q6ZUX7 228 aa10.52□□□□□ -0.73
CDX2-202ENST00000548877 ZNF565Q8N9K5 539 aa10.52□□□□□ -0.73
CDX2-202ENST00000548877 OR5H6Q8NGV6 325 aa10.52□□□□□ -0.73
CDX2-202ENST00000548877 SPSB1Q96BD6 273 aa10.52□□□□□ -0.73
CDX2-202ENST00000548877 FAM3DQ96BQ1 224 aa10.52□□□□□ -0.73
CDX2-202ENST00000548877 UBE2E2Q96LR5 201 aa10.52□□□□□ -0.73
CDX2-202ENST00000548877 C7orf50Q9BRJ6 194 aaKnown RBP10.52□□□□□ -0.73
CDX2-202ENST00000548877 DIABLOQ9NR28 239 aa10.52□□□□□ -0.73
CDX2-202ENST00000548877 RHBDL2Q9NX52 303 aa10.52□□□□□ -0.73
CDX2-202ENST00000548877 IDI2-AS1Q9NZ38 188 aa10.52□□□□□ -0.73
CDX2-202ENST00000548877 IGHV1-3A0A0C4DH29 117 aa10.51□□□□□ -0.73
CDX2-202ENST00000548877 CENPXA8MT69 81 aa10.51□□□□□ -0.73
CDX2-202ENST00000548877 A8MZ25 164 aa10.51□□□□□ -0.73
CDX2-202ENST00000548877 POU3F4P49335 361 aa10.51□□□□□ -0.73
CDX2-202ENST00000548877 SNU13P55769 128 aaKnown RBP10.51□□□□□ -0.73
CDX2-202ENST00000548877 AP3S2P59780 193 aa10.51□□□□□ -0.73
CDX2-202ENST00000548877 P2RY14Q15391 338 aa10.51□□□□□ -0.73
CDX2-202ENST00000548877 ADAMTSL5Q6ZMM2 481 aa10.51□□□□□ -0.73
CDX2-202ENST00000548877 SNX29P2Q8IUI4 249 aa10.51□□□□□ -0.73
CDX2-202ENST00000548877 SAXO1Q8IYX7 474 aa10.51□□□□□ -0.73
CDX2-202ENST00000548877 JAGN1Q8N5M9 183 aa10.51□□□□□ -0.73
CDX2-202ENST00000548877 OR2T10Q8NGZ9 312 aa10.51□□□□□ -0.73
CDX2-202ENST00000548877 DEDD2Q8WXF8 326 aa10.51□□□□□ -0.73
CDX2-202ENST00000548877 ORAI1Q96D31 301 aa10.51□□□□□ -0.73
CDX2-202ENST00000548877 CALYQ9NYX4 217 aa10.51□□□□□ -0.73
CDX2-202ENST00000548877 NCBP2LA6PVI3 153 aaKnown RBP10.5□□□□□ -0.73
CDX2-202ENST00000548877 HSD17B6O14756 317 aa10.5□□□□□ -0.73
CDX2-202ENST00000548877 LDLRAD4O15165 306 aa10.5□□□□□ -0.73
CDX2-202ENST00000548877 BPNT1O95861 308 aa10.5□□□□□ -0.73
CDX2-202ENST00000548877 GAPDHP04406 335 aaKnown RBP10.5□□□□□ -0.73
CDX2-202ENST00000548877 GSTT2BP0CG30 244 aa10.5□□□□□ -0.73
CDX2-202ENST00000548877 UBBP0CG47 229 aa10.5□□□□□ -0.73
CDX2-202ENST00000548877 OR5H8P0DN80 308 aa10.5□□□□□ -0.73
CDX2-202ENST00000548877 GP9P14770 177 aa10.5□□□□□ -0.73
CDX2-202ENST00000548877 ZNF44P15621 663 aa10.5□□□□□ -0.73
CDX2-202ENST00000548877 ARSBP15848 533 aa10.5□□□□□ -0.73
CDX2-202ENST00000548877 SPNP16150 400 aa10.5□□□□□ -0.73
CDX2-202ENST00000548877 RAB6AP20340 208 aa10.5□□□□□ -0.73
CDX2-202ENST00000548877 ZNF616Q08AN1 781 aa10.5□□□□□ -0.73
CDX2-202ENST00000548877 TMEM69Q5SWH9 247 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms