RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 CENPSQ8N2Z9 138 aa12.93□□□□□ -0.34
TRAFD1-203ENST00000547063 PNKDQ8N490 385 aa12.93□□□□□ -0.34
TRAFD1-203ENST00000547063 TEX29Q8N6K0 151 aa12.93□□□□□ -0.34
TRAFD1-203ENST00000547063 OR10X1Q8NGY0 326 aa12.93□□□□□ -0.34
TRAFD1-203ENST00000547063 LEAP2Q969E1 77 aa12.93□□□□□ -0.34
TRAFD1-203ENST00000547063 MRGPRFQ96AM1 343 aa12.93□□□□□ -0.34
TRAFD1-203ENST00000547063 FAHD2AQ96GK7 314 aa12.93□□□□□ -0.34
TRAFD1-203ENST00000547063 S1PR3Q99500 378 aa12.93□□□□□ -0.34
TRAFD1-203ENST00000547063 MARVELD1Q9BSK0 173 aa12.93□□□□□ -0.34
TRAFD1-203ENST00000547063 PARP12Q9H0J9 701 aaKnown RBP12.93□□□□□ -0.34
TRAFD1-203ENST00000547063 MMP28Q9H239 520 aa12.93□□□□□ -0.34
TRAFD1-203ENST00000547063 ASH1LQ9NR48 2969 aaKnown RBP12.93□□□□□ -0.34
TRAFD1-203ENST00000547063 ARPC1BO15143 372 aaKnown RBP12.92□□□□□ -0.34
TRAFD1-203ENST00000547063 ST8SIA5O15466 376 aa12.92□□□□□ -0.34
TRAFD1-203ENST00000547063 FLNBO75369 2602 aaKnown RBP12.92□□□□□ -0.34
TRAFD1-203ENST00000547063 DHFRP00374 187 aa12.92□□□□□ -0.34
TRAFD1-203ENST00000547063 IGHV3-7P01780 117 aa12.92□□□□□ -0.34
TRAFD1-203ENST00000547063 HOXB4P17483 251 aaPredicted RBP12.92□□□□□ -0.34
TRAFD1-203ENST00000547063 COX7A1P24310 79 aa12.92□□□□□ -0.34
TRAFD1-203ENST00000547063 CEACAM3P40198 252 aa12.92□□□□□ -0.34
TRAFD1-203ENST00000547063 UBE2E1P51965 193 aa12.92□□□□□ -0.34
TRAFD1-203ENST00000547063 ZNF134P52741 427 aa12.92□□□□□ -0.34
TRAFD1-203ENST00000547063 HLA-DRB5Q30154 266 aa12.92□□□□□ -0.34
TRAFD1-203ENST00000547063 LYG1Q8N1E2 194 aa12.92□□□□□ -0.34
TRAFD1-203ENST00000547063 BVESQ8NE79 360 aa12.92□□□□□ -0.34
TRAFD1-203ENST00000547063 UPRTQ96BW1 309 aa12.92□□□□□ -0.34
TRAFD1-203ENST00000547063 TBX15Q96SF7 602 aa12.92□□□□□ -0.34
TRAFD1-203ENST00000547063 ALX4Q9H161 411 aaPredicted RBP12.92□□□□□ -0.34
TRAFD1-203ENST00000547063 IFI27L2Q9H2X8 130 aa12.92□□□□□ -0.34
TRAFD1-203ENST00000547063 VSIG4Q9Y279 399 aa12.92□□□□□ -0.34
TRAFD1-203ENST00000547063 TRAV6A0A075B6T7 132 aa12.91□□□□□ -0.34
TRAFD1-203ENST00000547063 RNF212BA8MTL3 300 aa12.91□□□□□ -0.34
TRAFD1-203ENST00000547063 INMT-MINDY4F8WBC2 141 aa12.91□□□□□ -0.34
TRAFD1-203ENST00000547063 SMAD7O15105 426 aaKnown RBP12.91□□□□□ -0.34
TRAFD1-203ENST00000547063 PRAF2O60831 178 aa12.91□□□□□ -0.34
TRAFD1-203ENST00000547063 PEX14O75381 377 aa12.91□□□□□ -0.34
TRAFD1-203ENST00000547063 IGLV1-47P01700 117 aa12.91□□□□□ -0.34
TRAFD1-203ENST00000547063 ZNF16P17020 682 aaPredicted RBP12.91□□□□□ -0.34
TRAFD1-203ENST00000547063 GNRHRP30968 328 aa12.91□□□□□ -0.34
TRAFD1-203ENST00000547063 LGALS4P56470 323 aa12.91□□□□□ -0.34
TRAFD1-203ENST00000547063 RND3P61587 244 aa12.91□□□□□ -0.34
TRAFD1-203ENST00000547063 BAMBIQ13145 260 aa12.91□□□□□ -0.34
TRAFD1-203ENST00000547063 ZNF626Q68DY1 528 aa12.91□□□□□ -0.34
TRAFD1-203ENST00000547063 FAM53AQ6NSI3 398 aaPredicted RBP12.91□□□□□ -0.34
TRAFD1-203ENST00000547063 FAM71F2Q6NXP2 309 aa12.91□□□□□ -0.34
TRAFD1-203ENST00000547063 ZNF818PQ6ZRF7 136 aa12.91□□□□□ -0.34
TRAFD1-203ENST00000547063 TMED4Q7Z7H5 227 aa12.91□□□□□ -0.34
TRAFD1-203ENST00000547063 CCL28Q9NRJ3 127 aa12.91□□□□□ -0.34
TRAFD1-203ENST00000547063 SLC2A9Q9NRM0 540 aa12.91□□□□□ -0.34
TRAFD1-203ENST00000547063 RNF150Q9ULK6 438 aa12.91□□□□□ -0.34
TRAFD1-203ENST00000547063 A0A1W2PPE3 182 aa12.9□□□□□ -0.34
TRAFD1-203ENST00000547063 RNASEK-C17orf49H0YIS7 233 aa12.9□□□□□ -0.34
TRAFD1-203ENST00000547063 HSD17B6O14756 317 aa12.9□□□□□ -0.34
TRAFD1-203ENST00000547063 SLC31A2O15432 143 aa12.9□□□□□ -0.34
TRAFD1-203ENST00000547063 B3GALNT1O75752 331 aa12.9□□□□□ -0.34
TRAFD1-203ENST00000547063 ARG1P05089 322 aa12.9□□□□□ -0.34
TRAFD1-203ENST00000547063 HTR1DP28221 377 aa12.9□□□□□ -0.34
TRAFD1-203ENST00000547063 MECP2P51608 486 aaKnown RBP12.9□□□□□ -0.34
TRAFD1-203ENST00000547063 ZNF137PP52743 207 aa12.9□□□□□ -0.34
TRAFD1-203ENST00000547063 PIGPP57054 158 aa12.9□□□□□ -0.34
TRAFD1-203ENST00000547063 TMEM128Q5BJH2 165 aa12.9□□□□□ -0.34
TRAFD1-203ENST00000547063 MINOS1Q5TGZ0 78 aa12.9□□□□□ -0.34
TRAFD1-203ENST00000547063 SPNS3Q6ZMD2 512 aa12.9□□□□□ -0.34
TRAFD1-203ENST00000547063 ZNF66Q6ZN08 573 aa12.9□□□□□ -0.34
TRAFD1-203ENST00000547063 SLC25A42Q86VD7 318 aa12.9□□□□□ -0.34
TRAFD1-203ENST00000547063 SGPP2Q8IWX5 399 aa12.9□□□□□ -0.34
TRAFD1-203ENST00000547063 CIARTQ8N365 385 aaPredicted RBP12.9□□□□□ -0.34
TRAFD1-203ENST00000547063 DRAM1Q8N682 238 aa12.9□□□□□ -0.34
TRAFD1-203ENST00000547063 LHX4Q969G2 390 aa12.9□□□□□ -0.34
TRAFD1-203ENST00000547063 ABHD14BQ96IU4 210 aa12.9□□□□□ -0.34
TRAFD1-203ENST00000547063 ADTRPQ96IZ2 230 aa12.9□□□□□ -0.34
TRAFD1-203ENST00000547063 HSD17B10Q99714 261 aaKnown RBP12.9□□□□□ -0.34
TRAFD1-203ENST00000547063 RTBDNQ9BSG5 229 aaPredicted RBP12.9□□□□□ -0.34
TRAFD1-203ENST00000547063 C5orf66Q9H5L9 145 aa12.9□□□□□ -0.34
TRAFD1-203ENST00000547063 KCNIP3Q9Y2W7 256 aa12.9□□□□□ -0.34
TRAFD1-203ENST00000547063 TBL2Q9Y4P3 447 aaKnown RBP12.9□□□□□ -0.34
TRAFD1-203ENST00000547063 MINOS1-NBL1R4GNA1 71 aa12.9□□□□□ -0.34
TRAFD1-203ENST00000547063 ITPR3Q14573 2671 aa12.89□□□□□ -0.35
TRAFD1-203ENST00000547063 SAA2-SAA4A0A096LPE2 208 aa12.89□□□□□ -0.35
TRAFD1-203ENST00000547063 TEX13DA0A0J9YY54 714 aaPredicted RBP12.89□□□□□ -0.35
TRAFD1-203ENST00000547063 ODF3BA8MYP8 253 aa12.89□□□□□ -0.35
TRAFD1-203ENST00000547063 LEUTXA8MZ59 168 aa12.89□□□□□ -0.35
TRAFD1-203ENST00000547063 BUB1B-PAK6H3BSN5 160 aa12.89□□□□□ -0.35
TRAFD1-203ENST00000547063 TXNL1O43396 289 aa12.89□□□□□ -0.35
TRAFD1-203ENST00000547063 SAA2P0DJI9 122 aaPredicted RBP12.89□□□□□ -0.35
TRAFD1-203ENST00000547063 SPNP16150 400 aa12.89□□□□□ -0.35
TRAFD1-203ENST00000547063 BPIFB3P59826 476 aa12.89□□□□□ -0.35
TRAFD1-203ENST00000547063 CATR1Q13166 79 aa12.89□□□□□ -0.35
TRAFD1-203ENST00000547063 MIDNQ504T8 468 aa12.89□□□□□ -0.35
TRAFD1-203ENST00000547063 UTF1Q5T230 341 aa12.89□□□□□ -0.35
TRAFD1-203ENST00000547063 GPR157Q5UAW9 335 aa12.89□□□□□ -0.35
TRAFD1-203ENST00000547063 HCP5Q6MZN7 132 aa12.89□□□□□ -0.35
TRAFD1-203ENST00000547063 KCTD9Q7L273 389 aa12.89□□□□□ -0.35
TRAFD1-203ENST00000547063 LDLRAD3Q86YD5 345 aa12.89□□□□□ -0.35
TRAFD1-203ENST00000547063 RTN4IP1Q8WWV3 396 aaPredicted RBP12.89□□□□□ -0.35
TRAFD1-203ENST00000547063 C18orf12Q96KH6 178 aa12.89□□□□□ -0.35
TRAFD1-203ENST00000547063 GPN1Q9HCN4 374 aaPredicted RBP12.89□□□□□ -0.35
TRAFD1-203ENST00000547063 SDHAF2Q9NX18 166 aa12.89□□□□□ -0.35
TRAFD1-203ENST00000547063 DPM3Q9P2X0 92 aa12.89□□□□□ -0.35
TRAFD1-203ENST00000547063 FLVCR2Q9UPI3 526 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms