RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 HIST1H2BNQ99877 126 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 HIST1H2BMQ99879 126 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 CXXC4Q9H2H0 198 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 RBKSQ9H477 322 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 TMEM106BQ9NUM4 274 aa11.12□□□□□ -0.63
PTCH1-212ENST00000546744 TNFSF10P50591 281 aa11.11□□□□□ -0.63
PTCH1-212ENST00000546744 RLN3Q8WXF3 142 aa11.11□□□□□ -0.63
PTCH1-212ENST00000546744 C12orf49Q9H741 205 aa11.11□□□□□ -0.63
PTCH1-212ENST00000546744 OR2J3O76001 311 aa11.11□□□□□ -0.63
PTCH1-212ENST00000546744 CLDN18P56856 261 aa11.11□□□□□ -0.63
PTCH1-212ENST00000546744 HES1Q14469 280 aa11.11□□□□□ -0.63
PTCH1-212ENST00000546744 VHLLQ6RSH7 139 aa11.11□□□□□ -0.63
PTCH1-212ENST00000546744 F5P12259 2224 aa11.11□□□□□ -0.63
PTCH1-212ENST00000546744 SRIP30626 198 aa11.11□□□□□ -0.63
PTCH1-212ENST00000546744 CEBPDP49716 269 aaPredicted RBP11.11□□□□□ -0.63
PTCH1-212ENST00000546744 TTC32Q5I0X7 151 aa11.11□□□□□ -0.63
PTCH1-212ENST00000546744 UBALD1Q8TB05 177 aa11.11□□□□□ -0.63
PTCH1-212ENST00000546744 NEUROG1Q92886 237 aa11.11□□□□□ -0.63
PTCH1-212ENST00000546744 SLC17A3O00476 420 aa11.1□□□□□ -0.63
PTCH1-212ENST00000546744 COL10A1Q03692 680 aa11.1□□□□□ -0.63
PTCH1-212ENST00000546744 SELENOHQ8IZQ5 122 aaKnown RBP11.1□□□□□ -0.63
PTCH1-212ENST00000546744 LYG1Q8N1E2 194 aa11.1□□□□□ -0.63
PTCH1-212ENST00000546744 HIST3H2BBQ8N257 126 aa11.1□□□□□ -0.63
PTCH1-212ENST00000546744 OR8B3Q8NGG8 313 aa11.1□□□□□ -0.63
PTCH1-212ENST00000546744 IL36BQ9NZH7 164 aa11.1□□□□□ -0.63
PTCH1-212ENST00000546744 LOC102724200A0A096LPH7 203 aaPredicted RBP11.1□□□□□ -0.63
PTCH1-212ENST00000546744 OR4A8P0C604 315 aa11.1□□□□□ -0.63
PTCH1-212ENST00000546744 MRPS11P82912 194 aaKnown RBP11.1□□□□□ -0.63
PTCH1-212ENST00000546744 BIVMQ86UB2 503 aa11.1□□□□□ -0.63
PTCH1-212ENST00000546744 RFLNBQ8N5W9 214 aa11.1□□□□□ -0.63
PTCH1-212ENST00000546744 OR5A1Q8NGJ0 315 aa11.1□□□□□ -0.63
PTCH1-212ENST00000546744 OR1L8Q8NGR8 309 aa11.1□□□□□ -0.63
PTCH1-212ENST00000546744 RCC1LQ96I51 464 aaKnown RBP11.1□□□□□ -0.63
PTCH1-212ENST00000546744 GUCD1Q96NT3 240 aa11.1□□□□□ -0.63
PTCH1-212ENST00000546744 IGHMP01871 453 aa11.1□□□□□ -0.63
PTCH1-212ENST00000546744 ACP1P24666 158 aa11.1□□□□□ -0.63
PTCH1-212ENST00000546744 DLX1P56177 255 aa11.1□□□□□ -0.63
PTCH1-212ENST00000546744 RPS20P60866 119 aaKnown RBP11.1□□□□□ -0.63
PTCH1-212ENST00000546744 RPS4XP62701 263 aaKnown RBP11.1□□□□□ -0.63
PTCH1-212ENST00000546744 TRA2AQ13595 282 aaKnown RBP eCLIP11.1□□□□□ -0.63
PTCH1-212ENST00000546744 LILRA6Q6PI73 481 aa11.1□□□□□ -0.63
PTCH1-212ENST00000546744 OR8A1Q8NGG7 326 aa11.1□□□□□ -0.63
PTCH1-212ENST00000546744 RPRMQ9NS64 109 aa11.1□□□□□ -0.63
PTCH1-212ENST00000546744 PROCRQ9UNN8 238 aa11.1□□□□□ -0.63
PTCH1-212ENST00000546744 MSGN1A6NI15 193 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 NUDT3O95989 172 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 GFERP55789 205 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 MGAT2Q10469 447 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 OR2Y1Q8NGV0 311 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 APOBEC4Q8WW27 367 aaKnown RBP11.09□□□□□ -0.63
PTCH1-212ENST00000546744 SSMEM1Q8WWF3 244 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 Q96M66 194 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 RP1L1Q8IWN7 2480 aaPredicted RBP11.09□□□□□ -0.63
PTCH1-212ENST00000546744 CKAP5Q14008 2032 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 SCN5AQ14524 2016 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 FAM157BP0CG42 384 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 GABRG2P18507 467 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 CXorf66Q5JRM2 361 aaPredicted RBP11.09□□□□□ -0.63
PTCH1-212ENST00000546744 LY6G6FQ5SQ64 297 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 C6orf15Q6UXA7 325 aaPredicted RBP11.09□□□□□ -0.63
PTCH1-212ENST00000546744 PRSS41Q7RTY9 318 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 ZAR1Q86SH2 424 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 OR4X1Q8NH49 305 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 TMEM190Q8WZ59 177 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 MRPL32Q9BYC8 188 aaKnown RBP11.09□□□□□ -0.63
PTCH1-212ENST00000546744 PLSCR2Q9NRY7 297 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 A1L4Q6 167 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 TNFSF13O75888 250 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 MAS1LP35410 378 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 COMPP49747 757 aaPredicted RBP11.09□□□□□ -0.63
PTCH1-212ENST00000546744 RPL30P62888 115 aaKnown RBP11.09□□□□□ -0.63
PTCH1-212ENST00000546744 LRRC10Q5BKY1 277 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 TMEM196Q5HYL7 178 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 C9orf50Q5SZB4 431 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 C1orf194Q5T5A4 169 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 CLDND2Q8NHS1 167 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 HIST1H2BLQ99880 126 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 PAXXQ9BUH6 204 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 SPANXA1Q9NS26 97 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 SYNGR1O43759 233 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 RPL7P18124 248 aaKnown RBP11.09□□□□□ -0.63
PTCH1-212ENST00000546744 SSX8Q7RTT4 187 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 GBGT1Q8N5D6 347 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 KCNK17Q96T54 332 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 GLRX2Q9NS18 164 aa11.09□□□□□ -0.63
PTCH1-212ENST00000546744 IGHV3-15A0A0B4J1V0 119 aa11.08□□□□□ -0.64
PTCH1-212ENST00000546744 SMIM13P0DJ93 91 aa11.08□□□□□ -0.64
PTCH1-212ENST00000546744 CA6P23280 308 aa11.08□□□□□ -0.64
PTCH1-212ENST00000546744 TMEM30BQ3MIR4 351 aa11.08□□□□□ -0.64
PTCH1-212ENST00000546744 ZPLD1Q8TCW7 415 aa11.08□□□□□ -0.64
PTCH1-212ENST00000546744 TM4SF19Q96DZ7 209 aa11.08□□□□□ -0.64
PTCH1-212ENST00000546744 SMOC1Q9H4F8 434 aa11.08□□□□□ -0.64
PTCH1-212ENST00000546744 ASCL3Q9NQ33 180 aa11.08□□□□□ -0.64
PTCH1-212ENST00000546744 SRSF4Q08170 494 aaKnown RBP11.08□□□□□ -0.64
PTCH1-212ENST00000546744 PDCD1Q15116 288 aa11.08□□□□□ -0.64
PTCH1-212ENST00000546744 SAMD13Q5VXD3 122 aa11.08□□□□□ -0.64
PTCH1-212ENST00000546744 OR10D3Q8NH80 312 aa11.08□□□□□ -0.64
PTCH1-212ENST00000546744 TM2D1Q9BX74 207 aa11.08□□□□□ -0.64
PTCH1-212ENST00000546744 AMMECR1Q9Y4X0 333 aaPredicted RBP11.08□□□□□ -0.64
PTCH1-212ENST00000546744 ZNF785A8K8V0 405 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms