RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 FBXL15Q9H469 300 aa11.13□□□□□ -0.63
TROAP-203ENST00000546735 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.13□□□□□ -0.63
TROAP-203ENST00000546735 KIAA1456Q9P272 454 aa11.13□□□□□ -0.63
TROAP-203ENST00000546735 ZMAT5Q9UDW3 170 aaKnown RBP11.13□□□□□ -0.63
TROAP-203ENST00000546735 STEAP1Q9UHE8 339 aa11.13□□□□□ -0.63
TROAP-203ENST00000546735 LSM4Q9Y4Z0 139 aaKnown RBP11.13□□□□□ -0.63
TROAP-203ENST00000546735 I3L521 148 aa11.12□□□□□ -0.63
TROAP-203ENST00000546735 SOCS1O15524 211 aa11.12□□□□□ -0.63
TROAP-203ENST00000546735 NDUFA3O95167 84 aa11.12□□□□□ -0.63
TROAP-203ENST00000546735 IGLV1-40P01703 118 aa11.12□□□□□ -0.63
TROAP-203ENST00000546735 CT45A6P0DMU7 189 aa11.12□□□□□ -0.63
TROAP-203ENST00000546735 CT45A5P0DMU8 189 aa11.12□□□□□ -0.63
TROAP-203ENST00000546735 CT45A7P0DMV0 189 aa11.12□□□□□ -0.63
TROAP-203ENST00000546735 SNRPBP14678 240 aaKnown RBP11.12□□□□□ -0.63
TROAP-203ENST00000546735 P2RY14Q15391 338 aa11.12□□□□□ -0.63
TROAP-203ENST00000546735 ECSCRQ19T08 205 aa11.12□□□□□ -0.63
TROAP-203ENST00000546735 LIPKQ5VXJ0 399 aa11.12□□□□□ -0.63
TROAP-203ENST00000546735 RNLSQ5VYX0 342 aa11.12□□□□□ -0.63
TROAP-203ENST00000546735 ZNF880Q6PDB4 577 aa11.12□□□□□ -0.63
TROAP-203ENST00000546735 NPBQ8NG41 125 aa11.12□□□□□ -0.63
TROAP-203ENST00000546735 UBE2E2Q96LR5 201 aa11.12□□□□□ -0.63
TROAP-203ENST00000546735 WWC2-AS2Q96NR7 200 aa11.12□□□□□ -0.63
TROAP-203ENST00000546735 GFI1Q99684 422 aa11.12□□□□□ -0.63
TROAP-203ENST00000546735 ASCL2Q99929 193 aa11.12□□□□□ -0.63
TROAP-203ENST00000546735 LPAR5Q9H1C0 372 aa11.12□□□□□ -0.63
TROAP-203ENST00000546735 PLEKHJ1Q9NW61 149 aa11.12□□□□□ -0.63
TROAP-203ENST00000546735 OR1A1Q9P1Q5 309 aa11.12□□□□□ -0.63
TROAP-203ENST00000546735 AK3Q9UIJ7 227 aa11.12□□□□□ -0.63
TROAP-203ENST00000546735 VSIG4Q9Y279 399 aa11.12□□□□□ -0.63
TROAP-203ENST00000546735 LRRC42Q9Y546 428 aa11.12□□□□□ -0.63
TROAP-203ENST00000546735 A3GALT2U3KPV4 340 aa11.12□□□□□ -0.63
TROAP-203ENST00000546735 RYR3Q15413 4870 aa11.11□□□□□ -0.63
TROAP-203ENST00000546735 FCN1O00602 326 aa11.11□□□□□ -0.63
TROAP-203ENST00000546735 SOX15O60248 233 aa11.11□□□□□ -0.63
TROAP-203ENST00000546735 UCHL1P09936 223 aa11.11□□□□□ -0.63
TROAP-203ENST00000546735 RAB9AP51151 201 aa11.11□□□□□ -0.63
TROAP-203ENST00000546735 RPS25P62851 125 aaKnown RBP11.11□□□□□ -0.63
TROAP-203ENST00000546735 DCTN2Q13561 401 aaKnown RBP11.11□□□□□ -0.63
TROAP-203ENST00000546735 MINDY2Q8NBR6 621 aa11.11□□□□□ -0.63
TROAP-203ENST00000546735 OR6M1Q8NGM8 313 aa11.11□□□□□ -0.63
TROAP-203ENST00000546735 UFD1Q92890 307 aa11.11□□□□□ -0.63
TROAP-203ENST00000546735 CHCHD6Q9BRQ6 235 aa11.11□□□□□ -0.63
TROAP-203ENST00000546735 PIPOXQ9P0Z9 390 aa11.11□□□□□ -0.63
TROAP-203ENST00000546735 NKX1-2Q9UD57 310 aaPredicted RBP11.11□□□□□ -0.63
TROAP-203ENST00000546735 SLC23A1Q9UHI7 598 aa11.11□□□□□ -0.63
TROAP-203ENST00000546735 AK6Q9Y3D8 172 aaKnown RBP11.11□□□□□ -0.63
TROAP-203ENST00000546735 HUWE1Q7Z6Z7 4374 aaKnown RBP11.1□□□□□ -0.63
TROAP-203ENST00000546735 A0A1W2PN81 502 aa11.1□□□□□ -0.63
TROAP-203ENST00000546735 RAB29O14966 203 aa11.1□□□□□ -0.63
TROAP-203ENST00000546735 BPNT1O95861 308 aa11.1□□□□□ -0.63
TROAP-203ENST00000546735 CD37P11049 281 aa11.1□□□□□ -0.63
TROAP-203ENST00000546735 CHRNA7P36544 502 aa11.1□□□□□ -0.63
TROAP-203ENST00000546735 CLDN12P56749 244 aa11.1□□□□□ -0.63
TROAP-203ENST00000546735 CX3CL1P78423 397 aa11.1□□□□□ -0.63
TROAP-203ENST00000546735 ZNF616Q08AN1 781 aa11.1□□□□□ -0.63
TROAP-203ENST00000546735 IRF3Q14653 427 aa11.1□□□□□ -0.63
TROAP-203ENST00000546735 PLGLAQ15195 96 aa11.1□□□□□ -0.63
TROAP-203ENST00000546735 TMEM91Q6ZNR0 172 aa11.1□□□□□ -0.63
TROAP-203ENST00000546735 CLCC1Q96S66 551 aa11.1□□□□□ -0.63
TROAP-203ENST00000546735 FAM103A1Q9BTL3 118 aaKnown RBP11.1□□□□□ -0.63
TROAP-203ENST00000546735 VCXQ9H320 206 aa11.1□□□□□ -0.63
TROAP-203ENST00000546735 PLGRKTQ9HBL7 147 aa11.1□□□□□ -0.63
TROAP-203ENST00000546735 SCN3BQ9NY72 215 aa11.1□□□□□ -0.63
TROAP-203ENST00000546735 RNF150Q9ULK6 438 aa11.1□□□□□ -0.63
TROAP-203ENST00000546735 GAB2Q9UQC2 676 aa11.1□□□□□ -0.63
TROAP-203ENST00000546735 ZNF256Q9Y2P7 627 aaPredicted RBP11.1□□□□□ -0.63
TROAP-203ENST00000546735 COL7A1Q02388 2944 aa11.09□□□□□ -0.63
TROAP-203ENST00000546735 H0YJW9 148 aa11.09□□□□□ -0.63
TROAP-203ENST00000546735 H7C2Y5 167 aa11.09□□□□□ -0.63
TROAP-203ENST00000546735 RRHO14718 337 aa11.09□□□□□ -0.63
TROAP-203ENST00000546735 LY86O95711 162 aa11.09□□□□□ -0.63
TROAP-203ENST00000546735 SCTP09683 121 aa11.09□□□□□ -0.63
TROAP-203ENST00000546735 OR8U8P0C7N1 319 aa11.09□□□□□ -0.63
TROAP-203ENST00000546735 HSMCR30P0CW71 290 aa11.09□□□□□ -0.63
TROAP-203ENST00000546735 EGR2P11161 476 aaPredicted RBP11.09□□□□□ -0.63
TROAP-203ENST00000546735 ARSBP15848 533 aa11.09□□□□□ -0.63
TROAP-203ENST00000546735 CEACAM6P40199 344 aa11.09□□□□□ -0.63
TROAP-203ENST00000546735 AQP4P55087 323 aa11.09□□□□□ -0.63
TROAP-203ENST00000546735 TMEM50BP56557 158 aa11.09□□□□□ -0.63
TROAP-203ENST00000546735 LINC00205P59089 165 aa11.09□□□□□ -0.63
TROAP-203ENST00000546735 HLA-DRB3P79483 266 aa11.09□□□□□ -0.63
TROAP-203ENST00000546735 RUNX1Q01196 453 aa11.09□□□□□ -0.63
TROAP-203ENST00000546735 C19orf54Q5BKX5 351 aa11.09□□□□□ -0.63
TROAP-203ENST00000546735 FAM71F2Q6NXP2 309 aa11.09□□□□□ -0.63
TROAP-203ENST00000546735 DRAXINQ8NBI3 349 aaPredicted RBP11.09□□□□□ -0.63
TROAP-203ENST00000546735 ABHD5Q8WTS1 349 aa11.09□□□□□ -0.63
TROAP-203ENST00000546735 DCUN1D4Q92564 292 aa11.09□□□□□ -0.63
TROAP-203ENST00000546735 AGMATQ9BSE5 352 aa11.09□□□□□ -0.63
TROAP-203ENST00000546735 URM1Q9BTM9 101 aaKnown RBP11.09□□□□□ -0.63
TROAP-203ENST00000546735 C11orf54Q9H0W9 315 aaPredicted RBP11.09□□□□□ -0.63
TROAP-203ENST00000546735 TRBV6-6A0A0A6YYG2 114 aa11.08□□□□□ -0.64
TROAP-203ENST00000546735 OR5H14A6NHG9 310 aa11.08□□□□□ -0.64
TROAP-203ENST00000546735 FOXI3A8MTJ6 420 aaPredicted RBP11.08□□□□□ -0.64
TROAP-203ENST00000546735 SLC17A2O00624 439 aa11.08□□□□□ -0.64
TROAP-203ENST00000546735 HSPA12AO43301 675 aa11.08□□□□□ -0.64
TROAP-203ENST00000546735 PROP1O75360 226 aa11.08□□□□□ -0.64
TROAP-203ENST00000546735 GSTP1P09211 210 aaKnown RBP11.08□□□□□ -0.64
TROAP-203ENST00000546735 NHLRC4P0CG21 123 aaPredicted RBP11.08□□□□□ -0.64
TROAP-203ENST00000546735 VEGFCP49767 419 aa11.08□□□□□ -0.64
TROAP-203ENST00000546735 SLURP1P55000 103 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms