RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 DDI2Q5TDH0 399 aa9.64□□□□□ -0.87
SCAF11-208ENST00000546534 ZNF562Q6V9R5 426 aa9.64□□□□□ -0.87
SCAF11-208ENST00000546534 SYS1Q8N2H4 156 aa9.64□□□□□ -0.87
SCAF11-208ENST00000546534 DEFB125Q8N687 156 aa9.64□□□□□ -0.87
SCAF11-208ENST00000546534 FBLIM1Q8WUP2 373 aa9.64□□□□□ -0.87
SCAF11-208ENST00000546534 RGP1Q92546 391 aaPredicted RBP9.64□□□□□ -0.87
SCAF11-208ENST00000546534 MRPS24Q96EL2 167 aaKnown RBP9.64□□□□□ -0.87
SCAF11-208ENST00000546534 CYYR1Q96J86 154 aa9.64□□□□□ -0.87
SCAF11-208ENST00000546534 NEURL2Q9BR09 285 aa9.64□□□□□ -0.87
SCAF11-208ENST00000546534 GABARAPL3Q9BY60 117 aa9.64□□□□□ -0.87
SCAF11-208ENST00000546534 SPACA1Q9HBV2 294 aa9.64□□□□□ -0.87
SCAF11-208ENST00000546534 ZNF355PQ9NSJ1 428 aa9.64□□□□□ -0.87
SCAF11-208ENST00000546534 PAK1IP1Q9NWT1 392 aaPredicted RBP9.64□□□□□ -0.87
SCAF11-208ENST00000546534 SIGLEC8Q9NYZ4 499 aa9.64□□□□□ -0.87
SCAF11-208ENST00000546534 JPT1Q9UK76 154 aa9.64□□□□□ -0.87
SCAF11-208ENST00000546534 ZNF780AO75290 641 aaPredicted RBP9.63□□□□□ -0.87
SCAF11-208ENST00000546534 CNIH1O95406 144 aa9.63□□□□□ -0.87
SCAF11-208ENST00000546534 CD7P09564 240 aa9.63□□□□□ -0.87
SCAF11-208ENST00000546534 GNGT1P63211 74 aa9.63□□□□□ -0.87
SCAF11-208ENST00000546534 PMS2P11Q13670 270 aa9.63□□□□□ -0.87
SCAF11-208ENST00000546534 MOGAT2Q3SYC2 334 aa9.63□□□□□ -0.87
SCAF11-208ENST00000546534 RAB12Q6IQ22 244 aa9.63□□□□□ -0.87
SCAF11-208ENST00000546534 GLDNQ6ZMI3 551 aaPredicted RBP9.63□□□□□ -0.87
SCAF11-208ENST00000546534 POC5Q8NA72 575 aa9.63□□□□□ -0.87
SCAF11-208ENST00000546534 MRPL48Q96GC5 212 aaKnown RBP9.63□□□□□ -0.87
SCAF11-208ENST00000546534 ALG8Q9BVK2 526 aa9.63□□□□□ -0.87
SCAF11-208ENST00000546534 WFDC10AQ9H1F0 79 aa9.63□□□□□ -0.87
SCAF11-208ENST00000546534 TMEM138Q9NPI0 162 aa9.63□□□□□ -0.87
SCAF11-208ENST00000546534 MBNL3Q9NUK0 354 aaKnown RBP9.63□□□□□ -0.87
SCAF11-208ENST00000546534 POMPQ9Y244 141 aa9.63□□□□□ -0.87
SCAF11-208ENST00000546534 EXOGQ9Y2C4 368 aaKnown RBP9.63□□□□□ -0.87
SCAF11-208ENST00000546534 KIAA1109Q2LD37 5005 aa9.62□□□□□ -0.87
SCAF11-208ENST00000546534 A0A0G2JLM5 398 aa9.62□□□□□ -0.87
SCAF11-208ENST00000546534 UBE2QL1A1L167 161 aa9.62□□□□□ -0.87
SCAF11-208ENST00000546534 CXorf65A6NEN9 183 aa9.62□□□□□ -0.87
SCAF11-208ENST00000546534 YPEL1O60688 119 aa9.62□□□□□ -0.87
SCAF11-208ENST00000546534 SC5DO75845 299 aa9.62□□□□□ -0.87
SCAF11-208ENST00000546534 BPNT1O95861 308 aa9.62□□□□□ -0.87
SCAF11-208ENST00000546534 CA2P00918 260 aa9.62□□□□□ -0.87
SCAF11-208ENST00000546534 TRBV12-3P01733 135 aa9.62□□□□□ -0.87
SCAF11-208ENST00000546534 MAS1P04201 325 aa9.62□□□□□ -0.87
SCAF11-208ENST00000546534 CT45A6P0DMU7 189 aa9.62□□□□□ -0.87
SCAF11-208ENST00000546534 CT45A5P0DMU8 189 aa9.62□□□□□ -0.87
SCAF11-208ENST00000546534 CT45A7P0DMV0 189 aa9.62□□□□□ -0.87
SCAF11-208ENST00000546534 ALDH3A2P51648 485 aa9.62□□□□□ -0.87
SCAF11-208ENST00000546534 GYS2P54840 703 aa9.62□□□□□ -0.87
SCAF11-208ENST00000546534 HTD2P86397 168 aa9.62□□□□□ -0.87
SCAF11-208ENST00000546534 DYRK1AQ13627 763 aa9.62□□□□□ -0.87
SCAF11-208ENST00000546534 AMIGO2Q86SJ2 522 aa9.62□□□□□ -0.87
SCAF11-208ENST00000546534 OR5T1Q8NG75 326 aa9.62□□□□□ -0.87
SCAF11-208ENST00000546534 TRUB1Q8WWH5 349 aaKnown RBP9.62□□□□□ -0.87
SCAF11-208ENST00000546534 ORAI1Q96D31 301 aa9.62□□□□□ -0.87
SCAF11-208ENST00000546534 LGALS12Q96DT0 336 aa9.62□□□□□ -0.87
SCAF11-208ENST00000546534 YPEL2Q96QA6 119 aa9.62□□□□□ -0.87
SCAF11-208ENST00000546534 IFI27L2Q9H2X8 130 aa9.62□□□□□ -0.87
SCAF11-208ENST00000546534 SRD5A3Q9H8P0 318 aa9.62□□□□□ -0.87
SCAF11-208ENST00000546534 IMPAD1Q9NX62 359 aa9.62□□□□□ -0.87
SCAF11-208ENST00000546534 KCNIP1Q9NZI2 227 aa9.62□□□□□ -0.87
SCAF11-208ENST00000546534 METTL1Q9UBP6 276 aaKnown RBP9.62□□□□□ -0.87
SCAF11-208ENST00000546534 PEX16Q9Y5Y5 336 aa9.62□□□□□ -0.87
SCAF11-208ENST00000546534 ZNF785A8K8V0 405 aa9.61□□□□□ -0.87
SCAF11-208ENST00000546534 H0YJW9 148 aa9.61□□□□□ -0.87
SCAF11-208ENST00000546534 H3BUA1 57 aa9.61□□□□□ -0.87
SCAF11-208ENST00000546534 H7C2Y5 167 aa9.61□□□□□ -0.87
SCAF11-208ENST00000546534 CA11O75493 328 aa9.61□□□□□ -0.87
SCAF11-208ENST00000546534 CD2P06729 351 aa9.61□□□□□ -0.87
SCAF11-208ENST00000546534 RAB6AP20340 208 aa9.61□□□□□ -0.87
SCAF11-208ENST00000546534 BDKRB2P30411 391 aa9.61□□□□□ -0.87
SCAF11-208ENST00000546534 GTF2A1P52655 376 aaPredicted RBP9.61□□□□□ -0.87
SCAF11-208ENST00000546534 PPP3R1P63098 170 aa9.61□□□□□ -0.87
SCAF11-208ENST00000546534 DEFA5Q01523 94 aa9.61□□□□□ -0.87
SCAF11-208ENST00000546534 PSG5Q15238 335 aa9.61□□□□□ -0.87
SCAF11-208ENST00000546534 TATDN3Q17R31 274 aa9.61□□□□□ -0.87
SCAF11-208ENST00000546534 CD300EQ496F6 205 aaPredicted RBP9.61□□□□□ -0.87
SCAF11-208ENST00000546534 RPL39P5Q59GN2 51 aa9.61□□□□□ -0.87
SCAF11-208ENST00000546534 LY6G6FQ5SQ64 297 aa9.61□□□□□ -0.87
SCAF11-208ENST00000546534 SLC25A30Q5SVS4 291 aa9.61□□□□□ -0.87
SCAF11-208ENST00000546534 ZNF554Q86TJ5 538 aa9.61□□□□□ -0.87
SCAF11-208ENST00000546534 OR2AK2Q8NG84 335 aa9.61□□□□□ -0.87
SCAF11-208ENST00000546534 OR2K2Q8NGT1 345 aa9.61□□□□□ -0.87
SCAF11-208ENST00000546534 GRPEL2Q8TAA5 225 aa9.61□□□□□ -0.87
SCAF11-208ENST00000546534 GPR148Q8TDV2 347 aa9.61□□□□□ -0.87
SCAF11-208ENST00000546534 ZNF184Q99676 751 aaPredicted RBP9.61□□□□□ -0.87
SCAF11-208ENST00000546534 SLC2A8Q9NY64 477 aa9.61□□□□□ -0.87
SCAF11-208ENST00000546534 PEF1Q9UBV8 284 aaKnown RBP9.61□□□□□ -0.87
SCAF11-208ENST00000546534 GMPPBQ9Y5P6 360 aa9.61□□□□□ -0.87
SCAF11-208ENST00000546534 NUPR2A6NF83 97 aa9.6□□□□□ -0.87
SCAF11-208ENST00000546534 OR5H14A6NHG9 310 aa9.6□□□□□ -0.87
SCAF11-208ENST00000546534 OR11H12B2RN74 326 aa9.6□□□□□ -0.87
SCAF11-208ENST00000546534 DEDDO75618 318 aa9.6□□□□□ -0.87
SCAF11-208ENST00000546534 RBBP9O75884 186 aa9.6□□□□□ -0.87
SCAF11-208ENST00000546534 OR2A4O95047 310 aa9.6□□□□□ -0.87
SCAF11-208ENST00000546534 MC5RP33032 325 aa9.6□□□□□ -0.87
SCAF11-208ENST00000546534 GBX2P52951 348 aaPredicted RBP9.6□□□□□ -0.87
SCAF11-208ENST00000546534 SNRPGP62308 76 aaKnown RBP9.6□□□□□ -0.87
SCAF11-208ENST00000546534 MRPL28Q13084 256 aaKnown RBP9.6□□□□□ -0.87
SCAF11-208ENST00000546534 GPR176Q14439 515 aa9.6□□□□□ -0.87
SCAF11-208ENST00000546534 FXYD3Q14802 87 aa9.6□□□□□ -0.87
SCAF11-208ENST00000546534 RPEL1Q2QD12 228 aa9.6□□□□□ -0.87
SCAF11-208ENST00000546534 MEDAGQ5VYS4 303 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms