RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 MDFIC2A0A1B0GVS7 189 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 A0A1W2PRD5 423 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 A0A1W2PRF3 423 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 A0A1W2PRM7 423 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 MEIOCA2RUB1 952 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 MEIS3P1A6NDR6 274 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 TRDCB7Z8K6 153 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 HSPA12AO43301 675 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 TPPPO94811 219 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 DIRAS3O95661 229 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 IGLV1-47P01700 117 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 IGHV3-7P01780 117 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 HLA-DQB1P01920 261 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 ARG1P05089 322 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 SCTP09683 121 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 S100A5P33763 92 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 PRSS3P35030 304 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 PPP1CCP36873 323 aaKnown RBP5.13□□□□□ -1.59
PRKDC-211ENST00000546304 BPIFB3P59826 476 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 HTD2P86397 168 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 FOXE3Q13461 319 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 IL18Q14116 193 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 SRSF7Q16629 238 aaKnown RBP eCLIP5.13□□□□□ -1.59
PRKDC-211ENST00000546304 HLA-DRB5Q30154 266 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 CNPY1Q3B7I2 92 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 Q3ZCU0 254 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 MIDNQ504T8 468 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 RNASE12Q5GAN4 147 aaKnown RBP5.13□□□□□ -1.59
PRKDC-211ENST00000546304 UTF1Q5T230 341 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 FAM53AQ6NSI3 398 aaPredicted RBP5.13□□□□□ -1.59
PRKDC-211ENST00000546304 C5orf24Q7Z6I8 188 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 LURAP1LQ8IV03 231 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 ABHD12Q8N2K0 398 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 GVQW1Q8N7I0 195 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 BEND2Q8NDZ0 799 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 BEST4Q8NFU0 473 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 OR2AK2Q8NG84 335 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 OR4P4Q8NGL7 312 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 OR4A4PQ8NGN8 299 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 OR10X1Q8NGY0 326 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 OR9G1Q8NH87 305 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 ZNF596Q8TC21 504 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 C22orf15Q8WYQ4 148 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 SNAPC3Q92966 411 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 GALMQ96C23 342 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 SLC6A7Q99884 636 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 ABHD14AQ9BUJ0 271 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 MMP28Q9H239 520 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 OR2S2Q9NQN1 319 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 AURKAIP1Q9NWT8 199 aaPredicted RBP5.13□□□□□ -1.59
PRKDC-211ENST00000546304 PTTG2Q9NZH5 202 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 OR1A1Q9P1Q5 309 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 ZNRD1Q9P1U0 126 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 SLC23A1Q9UHI7 598 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 ANXA10Q9UJ72 324 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 ANAPC10Q9UM13 185 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 PSG11Q9UQ72 335 aa5.13□□□□□ -1.59
PRKDC-211ENST00000546304 TBL2Q9Y4P3 447 aaKnown RBP5.13□□□□□ -1.59
PRKDC-211ENST00000546304 AMMECR1Q9Y4X0 333 aaPredicted RBP5.13□□□□□ -1.59
PRKDC-211ENST00000546304 COL6A5A8TX70 2615 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 IGKV1D-8A0A087WSZ0 117 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 A0A0U1RQK1 487 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 A0A1W2PPE3 182 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 J3QR06 171 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 SULT1C2O00338 296 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 TOR1AO14656 332 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 BET1O15155 118 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 SLC31A2O15432 143 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 RGS11O94810 467 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 FCER2P06734 321 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 FBP1P09467 338 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 GSTT2P0CG29 244 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 GSTT2BP0CG30 244 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 ZBTB25P24278 435 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 HTR1DP28221 377 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 TNFSF8P32971 234 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 RCVRNP35243 200 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 LGALS4P56470 323 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 ARPC4P59998 168 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 ACTBP60709 375 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 ACTG1P63261 375 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 MRPS10P82664 201 aaKnown RBP5.12□□□□□ -1.59
PRKDC-211ENST00000546304 DGCR2P98153 550 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 IGSF11Q5DX21 431 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 SPANXN2Q5MJ10 180 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 MINOS1Q5TGZ0 78 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 PYHIN1Q6K0P9 492 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 FAM131AQ6UXB0 335 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 LHFPL4Q7Z7J7 247 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 HOGA1Q86XE5 327 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 C8orf31Q8N9H6 132 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 ZNF439Q8NDP4 499 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 OR52L2PQ8NGH6 319 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 OR6Q1Q8NGQ2 317 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 GPX8Q8TED1 209 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 C15orf40Q8WUR7 153 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 SMIM4Q8WVI0 70 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 C17orf50Q8WW18 174 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 ZNF503Q96F45 646 aa5.12□□□□□ -1.59
PRKDC-211ENST00000546304 ABHD1Q96SE0 405 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms