RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 BTF3L4Q96K17 158 aa12.03□□□□□ -0.48
SRP54-202ENST00000546080 ZNF488Q96MN9 340 aa12.03□□□□□ -0.48
SRP54-202ENST00000546080 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.03□□□□□ -0.48
SRP54-202ENST00000546080 TRAV24A0A0B4J272 114 aa12.03□□□□□ -0.48
SRP54-202ENST00000546080 A0A0U1RQK1 487 aa12.03□□□□□ -0.48
SRP54-202ENST00000546080 ZNF320A2RRD8 509 aa12.03□□□□□ -0.48
SRP54-202ENST00000546080 COX5AP20674 150 aa12.03□□□□□ -0.48
SRP54-202ENST00000546080 LTBRP36941 435 aa12.03□□□□□ -0.48
SRP54-202ENST00000546080 RPL29P47914 159 aaKnown RBP12.03□□□□□ -0.48
SRP54-202ENST00000546080 B3GALT5-AS1P59052 145 aa12.03□□□□□ -0.48
SRP54-202ENST00000546080 GGNQ86UU5 652 aa12.03□□□□□ -0.48
SRP54-202ENST00000546080 KCNE4Q8WWG9 221 aa12.03□□□□□ -0.48
SRP54-202ENST00000546080 MS4A10Q96PG2 267 aa12.03□□□□□ -0.48
SRP54-202ENST00000546080 TMEM147Q9BVK8 224 aa12.03□□□□□ -0.48
SRP54-202ENST00000546080 MYO9BQ13459 2157 aa12.02□□□□□ -0.48
SRP54-202ENST00000546080 LOC102723996A0A087X1L8 192 aa12.02□□□□□ -0.48
SRP54-202ENST00000546080 M0QZK8 103 aa12.02□□□□□ -0.48
SRP54-202ENST00000546080 IGHV3-9P01782 118 aa12.02□□□□□ -0.48
SRP54-202ENST00000546080 CYC1P08574 325 aa12.02□□□□□ -0.48
SRP54-202ENST00000546080 RPL15P61313 204 aaKnown RBP12.02□□□□□ -0.48
SRP54-202ENST00000546080 PMP22Q01453 160 aa12.02□□□□□ -0.48
SRP54-202ENST00000546080 ATP6V1FQ16864 119 aa12.02□□□□□ -0.48
SRP54-202ENST00000546080 ZNF705AQ6ZN79 300 aaPredicted RBP12.02□□□□□ -0.48
SRP54-202ENST00000546080 TMEM256Q8N2U0 113 aa12.02□□□□□ -0.48
SRP54-202ENST00000546080 SMRP1Q8NCR6 262 aa12.02□□□□□ -0.48
SRP54-202ENST00000546080 SGCZQ96LD1 299 aa12.02□□□□□ -0.48
SRP54-202ENST00000546080 SH2D2AQ9NP31 389 aa12.02□□□□□ -0.48
SRP54-202ENST00000546080 IGHV5-10-1A0A0J9YXX1 117 aa12.02□□□□□ -0.49
SRP54-202ENST00000546080 C1QTNF9BB2RNN3 333 aa12.02□□□□□ -0.49
SRP54-202ENST00000546080 C11orf94C9JXX5 98 aa12.02□□□□□ -0.49
SRP54-202ENST00000546080 NPIPB11E5RHQ5 1161 aa12.02□□□□□ -0.49
SRP54-202ENST00000546080 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.02□□□□□ -0.49
SRP54-202ENST00000546080 MLNRO43193 412 aa12.02□□□□□ -0.49
SRP54-202ENST00000546080 WDR1O75083 606 aa12.02□□□□□ -0.49
SRP54-202ENST00000546080 RPLP1P05386 114 aaKnown RBP12.02□□□□□ -0.49
SRP54-202ENST00000546080 CCL2P13500 99 aa12.02□□□□□ -0.49
SRP54-202ENST00000546080 RELQ04864 619 aaPredicted RBP12.02□□□□□ -0.49
SRP54-202ENST00000546080 GUSBP11Q6P575 273 aa12.02□□□□□ -0.49
SRP54-202ENST00000546080 SLC23A3Q6PIS1 610 aa12.02□□□□□ -0.49
SRP54-202ENST00000546080 OR5A2Q8NGI9 324 aa12.02□□□□□ -0.49
SRP54-202ENST00000546080 OR10D3Q8NH80 312 aa12.02□□□□□ -0.49
SRP54-202ENST00000546080 WDYHV1Q96HA8 205 aa12.02□□□□□ -0.49
SRP54-202ENST00000546080 CCDC74BQ96LY2 380 aa12.02□□□□□ -0.49
SRP54-202ENST00000546080 TBX15Q96SF7 602 aa12.02□□□□□ -0.49
SRP54-202ENST00000546080 IMMP2LQ96T52 175 aa12.02□□□□□ -0.49
SRP54-202ENST00000546080 PXMP4Q9Y6I8 212 aa12.02□□□□□ -0.49
SRP54-202ENST00000546080 ABCA7Q8IZY2 2146 aa12.01□□□□□ -0.49
SRP54-202ENST00000546080 A0A1B0GUS0 222 aa12.01□□□□□ -0.49
SRP54-202ENST00000546080 A0A1W2PR80 420 aa12.01□□□□□ -0.49
SRP54-202ENST00000546080 C5orf49A4QMS7 147 aa12.01□□□□□ -0.49
SRP54-202ENST00000546080 GALR2O43603 387 aaPredicted RBP12.01□□□□□ -0.49
SRP54-202ENST00000546080 LILRA1O75019 489 aa12.01□□□□□ -0.49
SRP54-202ENST00000546080 SRD5A2P31213 254 aa12.01□□□□□ -0.49
SRP54-202ENST00000546080 CCL7P80098 99 aa12.01□□□□□ -0.49
SRP54-202ENST00000546080 CST9LP1Q5W188 147 aa12.01□□□□□ -0.49
SRP54-202ENST00000546080 BTNL3Q6UXE8 466 aa12.01□□□□□ -0.49
SRP54-202ENST00000546080 FGFRL1Q8N441 504 aa12.01□□□□□ -0.49
SRP54-202ENST00000546080 ZNF709Q8N972 641 aa12.01□□□□□ -0.49
SRP54-202ENST00000546080 ZNF552Q9H707 407 aaPredicted RBP12.01□□□□□ -0.49
SRP54-202ENST00000546080 DLL3Q9NYJ7 618 aa12.01□□□□□ -0.49
SRP54-202ENST00000546080 TNRC6BQ9UPQ9 1833 aaKnown RBP12.01□□□□□ -0.49
SRP54-202ENST00000546080 TRAV39A0A0B4J263 110 aa12.01□□□□□ -0.49
SRP54-202ENST00000546080 MARCH11A6NNE9 402 aa12.01□□□□□ -0.49
SRP54-202ENST00000546080 COX6A1P12074 109 aa12.01□□□□□ -0.49
SRP54-202ENST00000546080 CD99P14209 185 aa12.01□□□□□ -0.49
SRP54-202ENST00000546080 SPINK2P20155 84 aa12.01□□□□□ -0.49
SRP54-202ENST00000546080 GCH1P30793 250 aa12.01□□□□□ -0.49
SRP54-202ENST00000546080 MPLP40238 635 aa12.01□□□□□ -0.49
SRP54-202ENST00000546080 WNT5AP41221 380 aa12.01□□□□□ -0.49
SRP54-202ENST00000546080 LINC01551Q86U37 167 aa12.01□□□□□ -0.49
SRP54-202ENST00000546080 ZCCHC14Q8WYQ9 949 aaKnown RBP12.01□□□□□ -0.49
SRP54-202ENST00000546080 IMMP1LQ96LU5 166 aa12.01□□□□□ -0.49
SRP54-202ENST00000546080 IL17BQ9UHF5 180 aa12.01□□□□□ -0.49
SRP54-202ENST00000546080 KIAA2026Q5HYC2 2103 aa12□□□□□ -0.49
SRP54-202ENST00000546080 A0A1W2PQM1 296 aa12□□□□□ -0.49
SRP54-202ENST00000546080 DLEU1O43261 78 aa12□□□□□ -0.49
SRP54-202ENST00000546080 HPRT1P00492 218 aa12□□□□□ -0.49
SRP54-202ENST00000546080 NPPCP23582 126 aa12□□□□□ -0.49
SRP54-202ENST00000546080 OR3A1P47881 315 aa12□□□□□ -0.49
SRP54-202ENST00000546080 TFF3Q07654 80 aa12□□□□□ -0.49
SRP54-202ENST00000546080 TMEM144Q7Z5S9 345 aa12□□□□□ -0.49
SRP54-202ENST00000546080 MRPL52Q86TS9 123 aaKnown RBP12□□□□□ -0.49
SRP54-202ENST00000546080 MYPOPQ86VE0 399 aaPredicted RBP12□□□□□ -0.49
SRP54-202ENST00000546080 RPS19BP1Q86WX3 136 aaKnown RBP12□□□□□ -0.49
SRP54-202ENST00000546080 FAM58AQ8N1B3 248 aa12□□□□□ -0.49
SRP54-202ENST00000546080 CMTM2Q8TAZ6 248 aa12□□□□□ -0.49
SRP54-202ENST00000546080 ABHD3Q8WU67 409 aa12□□□□□ -0.49
SRP54-202ENST00000546080 SDSLQ96GA7 329 aa12□□□□□ -0.49
SRP54-202ENST00000546080 WDR54Q9H977 334 aa12□□□□□ -0.49
SRP54-202ENST00000546080 RNF212BA8MTL3 300 aa11.99□□□□□ -0.49
SRP54-202ENST00000546080 NUPR1O60356 82 aa11.99□□□□□ -0.49
SRP54-202ENST00000546080 SYNGR4O95473 234 aa11.99□□□□□ -0.49
SRP54-202ENST00000546080 SFTPCP11686 197 aa11.99□□□□□ -0.49
SRP54-202ENST00000546080 HLA-BQ31612 363 aa11.99□□□□□ -0.49
SRP54-202ENST00000546080 C9orf135Q5VTT2 229 aa11.99□□□□□ -0.49
SRP54-202ENST00000546080 MOB1BQ7L9L4 216 aa11.99□□□□□ -0.49
SRP54-202ENST00000546080 ZNF573Q86YE8 665 aa11.99□□□□□ -0.49
SRP54-202ENST00000546080 OR10P1Q8NGE3 313 aa11.99□□□□□ -0.49
SRP54-202ENST00000546080 APOBEC3DQ96AK3 386 aaPredicted RBP11.99□□□□□ -0.49
SRP54-202ENST00000546080 TMEM208Q9BTX3 173 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms