RNA–Protein interactions for RNA: ENST00000545738.6

LIMS2-217, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 5 BASIC

Gene LIMS2, Length 1,730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-217ENST00000545738 LGALS4P56470 323 aa13.13□□□□□ -0.31
LIMS2-217ENST00000545738 RPL39P5Q59GN2 51 aa13.13□□□□□ -0.31
LIMS2-217ENST00000545738 TPTE2P1Q5T6R2 138 aa13.13□□□□□ -0.31
LIMS2-217ENST00000545738 MINOS1Q5TGZ0 78 aa13.13□□□□□ -0.31
LIMS2-217ENST00000545738 TEX29Q8N6K0 151 aa13.13□□□□□ -0.31
LIMS2-217ENST00000545738 PIFOQ8TCI5 191 aa13.13□□□□□ -0.31
LIMS2-217ENST00000545738 DUX5Q96PT3 197 aa13.13□□□□□ -0.31
LIMS2-217ENST00000545738 NECAP2Q9NVZ3 263 aa13.13□□□□□ -0.31
LIMS2-217ENST00000545738 RABL2AQ9UBK7 228 aaPredicted RBP13.13□□□□□ -0.31
LIMS2-217ENST00000545738 RABL2BQ9UNT1 228 aa13.13□□□□□ -0.31
LIMS2-217ENST00000545738 MINOS1-NBL1R4GNA1 71 aa13.13□□□□□ -0.31
LIMS2-217ENST00000545738 FBN1P35555 2871 aaKnown RBP13.13□□□□□ -0.31
LIMS2-217ENST00000545738 A0A1W2PPI3 338 aa13.13□□□□□ -0.31
LIMS2-217ENST00000545738 CD74P04233 296 aa13.13□□□□□ -0.31
LIMS2-217ENST00000545738 OR8U9P0C7N5 309 aa13.13□□□□□ -0.31
LIMS2-217ENST00000545738 AADACP22760 399 aa13.13□□□□□ -0.31
LIMS2-217ENST00000545738 PTBP1P26599 531 aaKnown RBP eCLIP13.13□□□□□ -0.31
LIMS2-217ENST00000545738 FCGR2CP31995 323 aa13.13□□□□□ -0.31
LIMS2-217ENST00000545738 ACTBP60709 375 aa13.13□□□□□ -0.31
LIMS2-217ENST00000545738 ACTG1P63261 375 aa13.13□□□□□ -0.31
LIMS2-217ENST00000545738 DYRK1AQ13627 763 aa13.13□□□□□ -0.31
LIMS2-217ENST00000545738 OR5H2Q8NGV7 314 aa13.13□□□□□ -0.31
LIMS2-217ENST00000545738 OR8U1Q8NH10 309 aa13.13□□□□□ -0.31
LIMS2-217ENST00000545738 ANKRD20A5PA0PJZ0 165 aa13.12□□□□□ -0.31
LIMS2-217ENST00000545738 ZNF736B4DX44 427 aaPredicted RBP13.12□□□□□ -0.31
LIMS2-217ENST00000545738 ITGB1BP1O14713 200 aa13.12□□□□□ -0.31
LIMS2-217ENST00000545738 RGS11O94810 467 aa13.12□□□□□ -0.31
LIMS2-217ENST00000545738 CD24P25063 80 aa13.12□□□□□ -0.31
LIMS2-217ENST00000545738 LINC00299Q6ZSB3 139 aa13.12□□□□□ -0.31
LIMS2-217ENST00000545738 MALSU1Q96EH3 234 aa13.12□□□□□ -0.31
LIMS2-217ENST00000545738 MEGF9Q9H1U4 602 aa13.12□□□□□ -0.31
LIMS2-217ENST00000545738 OR2D2Q9H210 308 aa13.12□□□□□ -0.31
LIMS2-217ENST00000545738 OR2W1Q9Y3N9 320 aa13.12□□□□□ -0.31
LIMS2-217ENST00000545738 C2CD3Q4AC94 2353 aa13.11□□□□□ -0.31
LIMS2-217ENST00000545738 LEUTXA8MZ59 168 aa13.11□□□□□ -0.31
LIMS2-217ENST00000545738 HSD17B6O14756 317 aa13.11□□□□□ -0.31
LIMS2-217ENST00000545738 PPYP01298 95 aa13.11□□□□□ -0.31
LIMS2-217ENST00000545738 IGHV4-59P01825 116 aa13.11□□□□□ -0.31
LIMS2-217ENST00000545738 FBP1P09467 338 aa13.11□□□□□ -0.31
LIMS2-217ENST00000545738 CTXN2P0C2S0 81 aa13.11□□□□□ -0.31
LIMS2-217ENST00000545738 ZNF735P0CB33 412 aa13.11□□□□□ -0.31
LIMS2-217ENST00000545738 TAS2R46P59540 309 aa13.11□□□□□ -0.31
LIMS2-217ENST00000545738 KLF9Q13886 244 aaPredicted RBP13.11□□□□□ -0.31
LIMS2-217ENST00000545738 DHRS11Q6UWP2 260 aa13.11□□□□□ -0.31
LIMS2-217ENST00000545738 Q6YL49 198 aa13.11□□□□□ -0.31
LIMS2-217ENST00000545738 TMEM229BQ8NBD8 167 aa13.11□□□□□ -0.31
LIMS2-217ENST00000545738 RTN4IP1Q8WWV3 396 aaPredicted RBP13.11□□□□□ -0.31
LIMS2-217ENST00000545738 MRGPRFQ96AM1 343 aa13.11□□□□□ -0.31
LIMS2-217ENST00000545738 OCEL1Q9H607 264 aa13.11□□□□□ -0.31
LIMS2-217ENST00000545738 ZNF45Q02386 682 aa13.1□□□□□ -0.31
LIMS2-217ENST00000545738 SSBP1Q04837 148 aaKnown RBP13.1□□□□□ -0.31
LIMS2-217ENST00000545738 VAX1Q5SQQ9 334 aa13.1□□□□□ -0.31
LIMS2-217ENST00000545738 STEAP1BQ6NZ63 245 aa13.1□□□□□ -0.31
LIMS2-217ENST00000545738 ZNF833PQ6ZTB9 187 aa13.1□□□□□ -0.31
LIMS2-217ENST00000545738 PRIMA1Q86XR5 153 aa13.1□□□□□ -0.31
LIMS2-217ENST00000545738 ZDHHC22Q8N966 263 aa13.1□□□□□ -0.31
LIMS2-217ENST00000545738 OR4C16Q8NGL9 310 aa13.1□□□□□ -0.31
LIMS2-217ENST00000545738 OR56B4Q8NH76 319 aa13.1□□□□□ -0.31
LIMS2-217ENST00000545738 GIMAP1Q8WWP7 306 aa13.1□□□□□ -0.31
LIMS2-217ENST00000545738 EDARADDQ8WWZ3 215 aa13.1□□□□□ -0.31
LIMS2-217ENST00000545738 CFHR4Q92496 578 aa13.1□□□□□ -0.31
LIMS2-217ENST00000545738 GPHA2Q96T91 129 aa13.1□□□□□ -0.31
LIMS2-217ENST00000545738 ARPC5LQ9BPX5 153 aa13.1□□□□□ -0.31
LIMS2-217ENST00000545738 ZNF2Q9BSG1 426 aaPredicted RBP13.1□□□□□ -0.31
LIMS2-217ENST00000545738 FXYD6Q9H0Q3 95 aa13.1□□□□□ -0.31
LIMS2-217ENST00000545738 FAM96BQ9Y3D0 163 aa13.1□□□□□ -0.31
LIMS2-217ENST00000545738 ATRQ13535 2644 aa13.1□□□□□ -0.31
LIMS2-217ENST00000545738 IGHV3-72A0A0B4J1Y9 119 aa13.1□□□□□ -0.31
LIMS2-217ENST00000545738 OR5H14A6NHG9 310 aa13.1□□□□□ -0.31
LIMS2-217ENST00000545738 TIMM23O14925 209 aa13.1□□□□□ -0.31
LIMS2-217ENST00000545738 HOXA3O43365 443 aaPredicted RBP13.1□□□□□ -0.31
LIMS2-217ENST00000545738 IER3P46695 156 aa13.1□□□□□ -0.31
LIMS2-217ENST00000545738 TAS2R19P59542 299 aa13.1□□□□□ -0.31
LIMS2-217ENST00000545738 AADACL3Q5VUY0 350 aa13.1□□□□□ -0.31
LIMS2-217ENST00000545738 GDPD1Q8N9F7 314 aa13.1□□□□□ -0.31
LIMS2-217ENST00000545738 TOMM40LQ969M1 308 aa13.1□□□□□ -0.31
LIMS2-217ENST00000545738 RPEQ96AT9 228 aa13.1□□□□□ -0.31
LIMS2-217ENST00000545738 MRPL20Q9BYC9 149 aaKnown RBP13.1□□□□□ -0.31
LIMS2-217ENST00000545738 SDHAF2Q9NX18 166 aa13.1□□□□□ -0.31
LIMS2-217ENST00000545738 AMMECR1Q9Y4X0 333 aaPredicted RBP13.1□□□□□ -0.31
LIMS2-217ENST00000545738 IGHV1-3A0A0C4DH29 117 aa13.09□□□□□ -0.31
LIMS2-217ENST00000545738 PFDN1O60925 122 aa13.09□□□□□ -0.31
LIMS2-217ENST00000545738 VENTXO95231 258 aa13.09□□□□□ -0.31
LIMS2-217ENST00000545738 FXYD4P59646 89 aa13.09□□□□□ -0.31
LIMS2-217ENST00000545738 ZNF816Q0VGE8 651 aaPredicted RBP13.09□□□□□ -0.31
LIMS2-217ENST00000545738 CCBE1Q6UXH8 406 aaPredicted RBP13.09□□□□□ -0.31
LIMS2-217ENST00000545738 DRAM1Q8N682 238 aa13.09□□□□□ -0.31
LIMS2-217ENST00000545738 SSX3Q99909 188 aa13.09□□□□□ -0.31
LIMS2-217ENST00000545738 TNFRSF19Q9NS68 423 aa13.09□□□□□ -0.31
LIMS2-217ENST00000545738 ZNF107Q9UII5 783 aaPredicted RBP13.09□□□□□ -0.31
LIMS2-217ENST00000545738 DNAJC9-AS1A6NH13 148 aa13.08□□□□□ -0.32
LIMS2-217ENST00000545738 H3BUX3 64 aa13.08□□□□□ -0.32
LIMS2-217ENST00000545738 RAB29O14966 203 aa13.08□□□□□ -0.32
LIMS2-217ENST00000545738 RAB3DO95716 219 aa13.08□□□□□ -0.32
LIMS2-217ENST00000545738 CSF1P09603 554 aa13.08□□□□□ -0.32
LIMS2-217ENST00000545738 IL7P13232 177 aa13.08□□□□□ -0.32
LIMS2-217ENST00000545738 RAB7AP51149 207 aa13.08□□□□□ -0.32
LIMS2-217ENST00000545738 CBX3Q13185 183 aa13.08□□□□□ -0.32
LIMS2-217ENST00000545738 SLC9A3R2Q15599 337 aa13.08□□□□□ -0.32
LIMS2-217ENST00000545738 RNASE10Q5GAN6 216 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms