RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 UBE2L5PA0A1B0GUS4 154 aa11.6□□□□□ -0.55
VPS33A-208ENST00000543633 ATXN7O15265 892 aaPredicted RBP11.6□□□□□ -0.55
VPS33A-208ENST00000543633 VENTXO95231 258 aa11.6□□□□□ -0.55
VPS33A-208ENST00000543633 P0C879 139 aa11.6□□□□□ -0.55
VPS33A-208ENST00000543633 FGF7P21781 194 aa11.6□□□□□ -0.55
VPS33A-208ENST00000543633 DDTP30046 118 aa11.6□□□□□ -0.55
VPS33A-208ENST00000543633 FAM3BP58499 235 aaPredicted RBP11.6□□□□□ -0.55
VPS33A-208ENST00000543633 ERVK11-1P61568 191 aa11.6□□□□□ -0.55
VPS33A-208ENST00000543633 IZUMO4Q1ZYL8 232 aa11.6□□□□□ -0.55
VPS33A-208ENST00000543633 SPANXN5Q5MJ07 72 aa11.6□□□□□ -0.55
VPS33A-208ENST00000543633 C16orf82Q7Z2V1 217 aa11.6□□□□□ -0.55
VPS33A-208ENST00000543633 DRAM1Q8N682 238 aa11.6□□□□□ -0.55
VPS33A-208ENST00000543633 OR1P1Q8NH06 330 aa11.6□□□□□ -0.55
VPS33A-208ENST00000543633 BTF3L4Q96K17 158 aa11.6□□□□□ -0.55
VPS33A-208ENST00000543633 SSX3Q99909 188 aa11.6□□□□□ -0.55
VPS33A-208ENST00000543633 GPR87Q9BY21 358 aa11.6□□□□□ -0.55
VPS33A-208ENST00000543633 PPP1R3CQ9UQK1 317 aa11.6□□□□□ -0.55
VPS33A-208ENST00000543633 SOX15O60248 233 aa11.59□□□□□ -0.55
VPS33A-208ENST00000543633 TYMSP04818 313 aa11.59□□□□□ -0.55
VPS33A-208ENST00000543633 MPLP40238 635 aa11.59□□□□□ -0.55
VPS33A-208ENST00000543633 WNT5AP41221 380 aa11.59□□□□□ -0.55
VPS33A-208ENST00000543633 CLN3Q13286 438 aa11.59□□□□□ -0.55
VPS33A-208ENST00000543633 ADIRFQ15847 76 aa11.59□□□□□ -0.55
VPS33A-208ENST00000543633 C9orf135Q5VTT2 229 aa11.59□□□□□ -0.55
VPS33A-208ENST00000543633 C6orf15Q6UXA7 325 aaPredicted RBP11.59□□□□□ -0.55
VPS33A-208ENST00000543633 RPP25LQ8N5L8 163 aaKnown RBP11.59□□□□□ -0.55
VPS33A-208ENST00000543633 OR51G1Q8NGK1 321 aa11.59□□□□□ -0.55
VPS33A-208ENST00000543633 CT55Q8WUE5 264 aa11.59□□□□□ -0.55
VPS33A-208ENST00000543633 SNX22Q96L94 193 aa11.59□□□□□ -0.55
VPS33A-208ENST00000543633 ACTR3CQ9C0K3 210 aaPredicted RBP11.59□□□□□ -0.55
VPS33A-208ENST00000543633 TRAPPC2LQ9UL33 140 aa11.59□□□□□ -0.55
VPS33A-208ENST00000543633 RBM7Q9Y580 266 aaKnown RBP11.59□□□□□ -0.55
VPS33A-208ENST00000543633 PCSK5Q92824 1860 aa11.59□□□□□ -0.55
VPS33A-208ENST00000543633 SDK2Q58EX2 2172 aa11.59□□□□□ -0.55
VPS33A-208ENST00000543633 H7BYZ3 331 aa11.59□□□□□ -0.55
VPS33A-208ENST00000543633 OR2H2O95918 312 aa11.59□□□□□ -0.55
VPS33A-208ENST00000543633 HRASP01112 189 aa11.59□□□□□ -0.55
VPS33A-208ENST00000543633 RD3LP0DJH9 198 aa11.59□□□□□ -0.55
VPS33A-208ENST00000543633 PDLIM4P50479 330 aa11.59□□□□□ -0.55
VPS33A-208ENST00000543633 ELLP55199 621 aaPredicted RBP11.59□□□□□ -0.55
VPS33A-208ENST00000543633 RPL23P62829 140 aaKnown RBP11.59□□□□□ -0.55
VPS33A-208ENST00000543633 ZNF146Q15072 292 aa11.59□□□□□ -0.55
VPS33A-208ENST00000543633 VWC2Q2TAL6 325 aa11.59□□□□□ -0.55
VPS33A-208ENST00000543633 FGFRL1Q8N441 504 aa11.59□□□□□ -0.55
VPS33A-208ENST00000543633 C17orf78Q8N4C9 275 aa11.59□□□□□ -0.55
VPS33A-208ENST00000543633 ZNF645Q8N7E2 425 aa11.59□□□□□ -0.55
VPS33A-208ENST00000543633 TMEM170AQ8WVE7 144 aa11.59□□□□□ -0.55
VPS33A-208ENST00000543633 LOXL4Q96JB6 756 aa11.59□□□□□ -0.55
VPS33A-208ENST00000543633 CIB3Q96Q77 187 aaPredicted RBP11.59□□□□□ -0.55
VPS33A-208ENST00000543633 ARRDC1-AS1Q9H2J1 176 aa11.59□□□□□ -0.55
VPS33A-208ENST00000543633 GP6Q9HCN6 339 aa11.59□□□□□ -0.55
VPS33A-208ENST00000543633 ABI3Q9P2A4 366 aa11.59□□□□□ -0.55
VPS33A-208ENST00000543633 GPR179Q6PRD1 2367 aa11.58□□□□□ -0.56
VPS33A-208ENST00000543633 LY86O95711 162 aa11.58□□□□□ -0.56
VPS33A-208ENST00000543633 IL2RGP31785 369 aa11.58□□□□□ -0.56
VPS33A-208ENST00000543633 SRP14P37108 136 aaKnown RBP11.58□□□□□ -0.56
VPS33A-208ENST00000543633 FOXG1P55316 489 aaPredicted RBP11.58□□□□□ -0.56
VPS33A-208ENST00000543633 CATR1Q13166 79 aa11.58□□□□□ -0.56
VPS33A-208ENST00000543633 ACOT6Q3I5F7 207 aaPredicted RBP11.58□□□□□ -0.56
VPS33A-208ENST00000543633 PDZD11Q5EBL8 140 aa11.58□□□□□ -0.56
VPS33A-208ENST00000543633 PLA2G2CQ5R387 149 aa11.58□□□□□ -0.56
VPS33A-208ENST00000543633 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.58□□□□□ -0.56
VPS33A-208ENST00000543633 RAB24Q969Q5 203 aa11.58□□□□□ -0.56
VPS33A-208ENST00000543633 NOL4LQ96MY1 436 aaPredicted RBP11.58□□□□□ -0.56
VPS33A-208ENST00000543633 ARHGAP21Q5T5U3 1957 aa11.58□□□□□ -0.56
VPS33A-208ENST00000543633 A0A1W2PR80 420 aa11.57□□□□□ -0.56
VPS33A-208ENST00000543633 PPP5D1E7EU14 171 aa11.57□□□□□ -0.56
VPS33A-208ENST00000543633 SH2D1BO14796 132 aa11.57□□□□□ -0.56
VPS33A-208ENST00000543633 GGCTO75223 188 aaKnown RBP11.57□□□□□ -0.56
VPS33A-208ENST00000543633 NEURL1O76050 574 aa11.57□□□□□ -0.56
VPS33A-208ENST00000543633 CLDN1O95832 211 aa11.57□□□□□ -0.56
VPS33A-208ENST00000543633 GCGP01275 180 aa11.57□□□□□ -0.56
VPS33A-208ENST00000543633 COX5AP20674 150 aa11.57□□□□□ -0.56
VPS33A-208ENST00000543633 CEACAM6P40199 344 aa11.57□□□□□ -0.56
VPS33A-208ENST00000543633 GALR1P47211 349 aa11.57□□□□□ -0.56
VPS33A-208ENST00000543633 GABRA6Q16445 453 aa11.57□□□□□ -0.56
VPS33A-208ENST00000543633 TMEM249Q2WGJ8 235 aa11.57□□□□□ -0.56
VPS33A-208ENST00000543633 OR1K1Q8NGR3 316 aa11.57□□□□□ -0.56
VPS33A-208ENST00000543633 LAMP3Q9UQV4 416 aa11.57□□□□□ -0.56
VPS33A-208ENST00000543633 R4GN57 208 aa11.57□□□□□ -0.56
VPS33A-208ENST00000543633 LILRA1O75019 489 aa11.57□□□□□ -0.56
VPS33A-208ENST00000543633 WDR1O75083 606 aa11.57□□□□□ -0.56
VPS33A-208ENST00000543633 RHBDL1O75783 438 aa11.57□□□□□ -0.56
VPS33A-208ENST00000543633 IGKV1D-33P01593 117 aa11.57□□□□□ -0.56
VPS33A-208ENST00000543633 IGKV1-33P01594 117 aa11.57□□□□□ -0.56
VPS33A-208ENST00000543633 AMBPP02760 352 aa11.57□□□□□ -0.56
VPS33A-208ENST00000543633 CD99P14209 185 aa11.57□□□□□ -0.56
VPS33A-208ENST00000543633 ZNF16P17020 682 aaPredicted RBP11.57□□□□□ -0.56
VPS33A-208ENST00000543633 CA6P23280 308 aa11.57□□□□□ -0.56
VPS33A-208ENST00000543633 SRYQ05066 204 aa11.57□□□□□ -0.56
VPS33A-208ENST00000543633 EIF4EBP1Q13541 118 aaPredicted RBP11.57□□□□□ -0.56
VPS33A-208ENST00000543633 ACSM6Q6P461 480 aa11.57□□□□□ -0.56
VPS33A-208ENST00000543633 FIP1L1Q6UN15 594 aaKnown RBP11.57□□□□□ -0.56
VPS33A-208ENST00000543633 NUFIP2Q7Z417 695 aaKnown RBP11.57□□□□□ -0.56
VPS33A-208ENST00000543633 PARLQ9H300 379 aa11.57□□□□□ -0.56
VPS33A-208ENST00000543633 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.57□□□□□ -0.56
VPS33A-208ENST00000543633 GAB2Q9UQC2 676 aa11.57□□□□□ -0.56
VPS33A-208ENST00000543633 A0A087X0M5 115 aa11.56□□□□□ -0.56
VPS33A-208ENST00000543633 A0A1B0GX30 115 aa11.56□□□□□ -0.56
VPS33A-208ENST00000543633 ARGFXA6NJG6 315 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms