RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 MCUR1Q96AQ8 359 aa3.53□□□□□ -1.84
LIMS1-214ENST00000542845 RARRES2Q99969 163 aa3.53□□□□□ -1.84
LIMS1-214ENST00000542845 KCTD14Q9BQ13 255 aaPredicted RBP3.53□□□□□ -1.84
LIMS1-214ENST00000542845 BTBD10Q9BSF8 475 aa3.53□□□□□ -1.84
LIMS1-214ENST00000542845 CMC2Q9NRP2 79 aa3.53□□□□□ -1.84
LIMS1-214ENST00000542845 MRGBPQ9NV56 204 aa3.53□□□□□ -1.84
LIMS1-214ENST00000542845 BAIAP2Q9UQB8 552 aa3.53□□□□□ -1.84
LIMS1-214ENST00000542845 TP53TG1Q9Y2A0 90 aa3.53□□□□□ -1.84
LIMS1-214ENST00000542845 DNAH11Q96DT5 4516 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 IGHV4-4A0A075B6R2 117 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 A0A0B4J203 849 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 BBIP1A8MTZ0 92 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 TNFRSF11BO00300 401 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 NME4O00746 187 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 AIREO43918 545 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 ZNF254O75437 659 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 OR2A4O95047 310 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 CCNB2O95067 398 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 FABP3P05413 133 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 APELAP0DMC3 54 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 FOLR2P14207 255 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 ATF1P18846 271 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 GZMHP20718 246 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 VHLP40337 213 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 KIR2DS2P43631 304 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 ALDH3A2P51648 485 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 CXCR4P61073 352 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 ACTR3P61158 418 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 CDK5R1Q15078 307 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 TNFAIP8L3Q5GJ75 292 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 CT45A1Q5HYN5 189 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 SOHLH1Q5JUK2 328 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 CD200R1LQ6Q8B3 271 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 DEGS2Q6QHC5 323 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 LINC00596Q86U02 117 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 LINC00311Q8N616 119 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 POM121L12Q8N7R1 296 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 POC5Q8NA72 575 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 AQP11Q8NBQ7 271 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 CT45A3Q8NHU0 189 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 CNIH3Q8TBE1 160 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 TEX47Q8TBZ9 253 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 CACNG8Q8WXS5 425 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 SNAPC3Q92966 411 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 PYURFQ96I23 114 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 AIFM2Q9BRQ8 373 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 MRPL20Q9BYC9 149 aaKnown RBP3.52□□□□□ -1.85
LIMS1-214ENST00000542845 COMMD4Q9H0A8 199 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 SPAG4Q9NPE6 437 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 IL1RAPQ9NPH3 570 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 ARL8BQ9NVJ2 186 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 COA4Q9NYJ1 87 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 GNG12Q9UBI6 72 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 SAMD4AQ9UPU9 718 aaKnown RBP3.52□□□□□ -1.85
LIMS1-214ENST00000542845 SNX5Q9Y5X3 404 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 R4GMQ9 66 aa3.52□□□□□ -1.85
LIMS1-214ENST00000542845 TRAV24A0A0B4J272 114 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 IGKV1-9A0A0C4DH69 117 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 ZNF320A2RRD8 509 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 FAM90A7PA6NKC0 464 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 MARCH11A6NNE9 402 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 FAM90A23PA8MXZ1 464 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 H7C2Y5 167 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 BMPR1BO00238 502 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 UBE2CO00762 179 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 RRHO14718 337 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 SRSF10O75494 262 aaKnown RBP3.51□□□□□ -1.85
LIMS1-214ENST00000542845 KDM4BO94953 1096 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 CA2P00918 260 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 IFNA10P01566 189 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 HLA-AP01891 365 aaKnown RBP3.51□□□□□ -1.85
LIMS1-214ENST00000542845 ZNF20P17024 532 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 PRKACBP22694 351 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 LGALS7P47929 136 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 MAPRE2Q15555 327 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 MICAQ29983 383 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 MRGPRG-AS1Q2M3A8 158 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 ANKRD55Q3KP44 614 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 MOGAT2Q3SYC2 334 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 RSBN1Q5VWQ0 802 aaPredicted RBP3.51□□□□□ -1.85
LIMS1-214ENST00000542845 ZNF57Q68EA5 555 aaPredicted RBP3.51□□□□□ -1.85
LIMS1-214ENST00000542845 ZNF343Q6P1L6 599 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 ZNF322Q6U7Q0 402 aaPredicted RBP3.51□□□□□ -1.85
LIMS1-214ENST00000542845 GLDNQ6ZMI3 551 aaPredicted RBP3.51□□□□□ -1.85
LIMS1-214ENST00000542845 RBPMS2Q6ZRY4 209 aaKnown RBP3.51□□□□□ -1.85
LIMS1-214ENST00000542845 NR2C2APQ86WQ0 139 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 UBE2DNLQ8IWF7 75 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 TMEM61Q8N0U2 210 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 CENPSQ8N2Z9 138 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 NPBQ8NG41 125 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 OR5B3Q8NH48 314 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 OR4A5Q8NH83 315 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 NEK7Q8TDX7 302 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 ASB17Q8WXJ9 295 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 THRSPQ92748 146 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 FGGYQ96C11 551 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 MRPS24Q96EL2 167 aaKnown RBP3.51□□□□□ -1.85
LIMS1-214ENST00000542845 C18orf15Q96N68 181 aa3.51□□□□□ -1.85
LIMS1-214ENST00000542845 FYTTD1Q96QD9 318 aaKnown RBP3.51□□□□□ -1.85
LIMS1-214ENST00000542845 TBX5Q99593 518 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms