RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 LIN54Q6MZP7 749 aa15.87■□□□□ 0.13
DDB1-220ENST00000542337 LCNL1Q6ZST4 164 aa15.87■□□□□ 0.13
DDB1-220ENST00000542337 FAM89BQ8N5H3 189 aa15.87■□□□□ 0.13
DDB1-220ENST00000542337 EDARADDQ8WWZ3 215 aa15.87■□□□□ 0.13
DDB1-220ENST00000542337 RAX2Q96IS3 184 aa15.87■□□□□ 0.13
DDB1-220ENST00000542337 DUX3Q96PT4 197 aa15.87■□□□□ 0.13
DDB1-220ENST00000542337 AK3Q9UIJ7 227 aa15.87■□□□□ 0.13
DDB1-220ENST00000542337 HSF4Q9ULV5 492 aa15.87■□□□□ 0.13
DDB1-220ENST00000542337 A0A0A6YYD4 124 aa15.86■□□□□ 0.13
DDB1-220ENST00000542337 TRBV6-6A0A0A6YYG2 114 aa15.86■□□□□ 0.13
DDB1-220ENST00000542337 ST8SIA5O15466 376 aa15.86■□□□□ 0.13
DDB1-220ENST00000542337 MRPS15P82914 257 aaKnown RBP15.86■□□□□ 0.13
DDB1-220ENST00000542337 OR5M8Q8NGP6 311 aa15.86■□□□□ 0.13
DDB1-220ENST00000542337 IFI27L2Q9H2X8 130 aa15.86■□□□□ 0.13
DDB1-220ENST00000542337 OR51J1Q9H342 316 aa15.86■□□□□ 0.13
DDB1-220ENST00000542337 V9GY05 133 aa15.86■□□□□ 0.13
DDB1-220ENST00000542337 DNAH3Q8TD57 4116 aa15.85■□□□□ 0.13
DDB1-220ENST00000542337 ERICH4A6NGS2 130 aa15.85■□□□□ 0.13
DDB1-220ENST00000542337 ITGB1BP1O14713 200 aa15.85■□□□□ 0.13
DDB1-220ENST00000542337 HLA-DRB1P01911 266 aa15.85■□□□□ 0.13
DDB1-220ENST00000542337 MC5RP33032 325 aa15.85■□□□□ 0.13
DDB1-220ENST00000542337 CEACAM6P40199 344 aa15.85■□□□□ 0.13
DDB1-220ENST00000542337 VEGFCP49767 419 aa15.85■□□□□ 0.13
DDB1-220ENST00000542337 CFHR3Q02985 330 aa15.85■□□□□ 0.13
DDB1-220ENST00000542337 DCTN2Q13561 401 aaKnown RBP15.85■□□□□ 0.13
DDB1-220ENST00000542337 C5orf64Q2M2E5 130 aa15.85■□□□□ 0.13
DDB1-220ENST00000542337 NPBQ8NG41 125 aa15.85■□□□□ 0.13
DDB1-220ENST00000542337 OR56B1Q8NGI3 324 aa15.85■□□□□ 0.13
DDB1-220ENST00000542337 FAM3DQ96BQ1 224 aa15.85■□□□□ 0.13
DDB1-220ENST00000542337 RBMXL1Q96E39 390 aaKnown RBP15.85■□□□□ 0.13
DDB1-220ENST00000542337 C12orf4Q9NQ89 552 aa15.85■□□□□ 0.13
DDB1-220ENST00000542337 PARP11Q9NR21 331 aa15.85■□□□□ 0.13
DDB1-220ENST00000542337 WI2-2373I1.2A0A1W2PRP0 233 aa15.84■□□□□ 0.13
DDB1-220ENST00000542337 OR5H14A6NHG9 310 aa15.84■□□□□ 0.13
DDB1-220ENST00000542337 PDCD5O14737 125 aa15.84■□□□□ 0.13
DDB1-220ENST00000542337 GSTP1P09211 210 aaKnown RBP15.84■□□□□ 0.13
DDB1-220ENST00000542337 PSMB8P28062 276 aa15.84■□□□□ 0.13
DDB1-220ENST00000542337 MAP2K4P45985 399 aa15.84■□□□□ 0.13
DDB1-220ENST00000542337 HLA-DRB3P79483 266 aa15.84■□□□□ 0.13
DDB1-220ENST00000542337 FABP5Q01469 135 aa15.84■□□□□ 0.13
DDB1-220ENST00000542337 PLGLAQ15195 96 aa15.84■□□□□ 0.13
DDB1-220ENST00000542337 C2orf76Q3KRA6 126 aa15.84■□□□□ 0.13
DDB1-220ENST00000542337 IZUMO2Q6UXV1 221 aa15.84■□□□□ 0.13
DDB1-220ENST00000542337 ZNF367Q7RTV3 350 aa15.84■□□□□ 0.13
DDB1-220ENST00000542337 C4orf3Q8WVX3 66 aa15.84■□□□□ 0.13
DDB1-220ENST00000542337 RITA1Q96K30 269 aa15.84■□□□□ 0.13
DDB1-220ENST00000542337 CNBD2Q96M20 576 aa15.84■□□□□ 0.13
DDB1-220ENST00000542337 GFI1Q99684 422 aa15.84■□□□□ 0.13
DDB1-220ENST00000542337 CMSS1Q9BQ75 279 aaKnown RBP15.84■□□□□ 0.13
DDB1-220ENST00000542337 WSB1Q9Y6I7 421 aa15.84■□□□□ 0.13
DDB1-220ENST00000542337 H7C2Y5 167 aa15.83■□□□□ 0.12
DDB1-220ENST00000542337 DENRO43583 198 aaKnown RBP15.83■□□□□ 0.12
DDB1-220ENST00000542337 CNTFRP26992 372 aa15.83■□□□□ 0.12
DDB1-220ENST00000542337 CLDN12P56749 244 aa15.83■□□□□ 0.12
DDB1-220ENST00000542337 DGCR2P98153 550 aa15.83■□□□□ 0.12
DDB1-220ENST00000542337 DEFB136Q30KP8 78 aa15.83■□□□□ 0.12
DDB1-220ENST00000542337 RPL39P5Q59GN2 51 aa15.83■□□□□ 0.12
DDB1-220ENST00000542337 FAM131AQ6UXB0 335 aa15.83■□□□□ 0.12
DDB1-220ENST00000542337 ARHGAP5-AS1Q96IT6 56 aa15.83■□□□□ 0.12
DDB1-220ENST00000542337 HDHD3Q9BSH5 251 aaPredicted RBP15.83■□□□□ 0.12
DDB1-220ENST00000542337 Q9N2K0 584 aa15.83■□□□□ 0.12
DDB1-220ENST00000542337 ZNF221Q9UK13 617 aa15.83■□□□□ 0.12
DDB1-220ENST00000542337 RAB22AQ9UL26 194 aa15.83■□□□□ 0.12
DDB1-220ENST00000542337 IGHV7-81A0A0B4J1V7 117 aa15.82■□□□□ 0.12
DDB1-220ENST00000542337 TRAV41A0A0B4J266 112 aa15.82■□□□□ 0.12
DDB1-220ENST00000542337 ATP6V0E1O15342 81 aa15.82■□□□□ 0.12
DDB1-220ENST00000542337 RAMP3O60896 148 aa15.82■□□□□ 0.12
DDB1-220ENST00000542337 RBBP9O75884 186 aa15.82■□□□□ 0.12
DDB1-220ENST00000542337 CT45A6P0DMU7 189 aa15.82■□□□□ 0.12
DDB1-220ENST00000542337 CT45A5P0DMU8 189 aa15.82■□□□□ 0.12
DDB1-220ENST00000542337 CT45A7P0DMV0 189 aa15.82■□□□□ 0.12
DDB1-220ENST00000542337 TBCEQ15813 527 aaPredicted RBP15.82■□□□□ 0.12
DDB1-220ENST00000542337 ZNF660Q6AZW8 331 aaPredicted RBP15.82■□□□□ 0.12
DDB1-220ENST00000542337 ABHD14BQ96IU4 210 aa15.82■□□□□ 0.12
DDB1-220ENST00000542337 PECRQ9BY49 303 aa15.82■□□□□ 0.12
DDB1-220ENST00000542337 C11orf54Q9H0W9 315 aaPredicted RBP15.82■□□□□ 0.12
DDB1-220ENST00000542337 VSIG4Q9Y279 399 aa15.82■□□□□ 0.12
DDB1-220ENST00000542337 WASHC3Q9Y3C0 194 aa15.82■□□□□ 0.12
DDB1-220ENST00000542337 TRDCB7Z8K6 153 aa15.81■□□□□ 0.12
DDB1-220ENST00000542337 RRHO14718 337 aa15.81■□□□□ 0.12
DDB1-220ENST00000542337 NDUFA3O95167 84 aa15.81■□□□□ 0.12
DDB1-220ENST00000542337 CD3GP09693 182 aa15.81■□□□□ 0.12
DDB1-220ENST00000542337 MYL9P24844 172 aa15.81■□□□□ 0.12
DDB1-220ENST00000542337 TMEM50BP56557 158 aa15.81■□□□□ 0.12
DDB1-220ENST00000542337 C9orf66Q5T8R8 295 aa15.81■□□□□ 0.12
DDB1-220ENST00000542337 UBE2E2Q96LR5 201 aa15.81■□□□□ 0.12
DDB1-220ENST00000542337 RNF5Q99942 180 aa15.81■□□□□ 0.12
DDB1-220ENST00000542337 OR1A1Q9P1Q5 309 aa15.81■□□□□ 0.12
DDB1-220ENST00000542337 G3V318 75 aa15.8■□□□□ 0.12
DDB1-220ENST00000542337 SCTP09683 121 aa15.8■□□□□ 0.12
DDB1-220ENST00000542337 PPIFP30405 207 aaKnown RBP15.8■□□□□ 0.12
DDB1-220ENST00000542337 SERPINB10P48595 397 aa15.8■□□□□ 0.12
DDB1-220ENST00000542337 TMEM267Q0VDI3 215 aaPredicted RBP15.8■□□□□ 0.12
DDB1-220ENST00000542337 HES5Q5TA89 166 aa15.8■□□□□ 0.12
DDB1-220ENST00000542337 GLDNQ6ZMI3 551 aaPredicted RBP15.8■□□□□ 0.12
DDB1-220ENST00000542337 OR11H1Q8NG94 326 aa15.8■□□□□ 0.12
DDB1-220ENST00000542337 ABHD5Q8WTS1 349 aa15.8■□□□□ 0.12
DDB1-220ENST00000542337 PTX4Q96A99 478 aa15.8■□□□□ 0.12
DDB1-220ENST00000542337 RAB3CQ96E17 227 aa15.8■□□□□ 0.12
DDB1-220ENST00000542337 AGMATQ9BSE5 352 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms