RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 HIST1H2BLQ99880 126 aa8.88□□□□□ -0.99
CHFR-219ENST00000541341 RARRES2Q99969 163 aa8.88□□□□□ -0.99
CHFR-219ENST00000541341 ST3GAL6Q9Y274 331 aa8.88□□□□□ -0.99
CHFR-219ENST00000541341 CHCHD2Q9Y6H1 151 aaPredicted RBP8.88□□□□□ -0.99
CHFR-219ENST00000541341 HIVEP1P15822 2718 aa8.88□□□□□ -0.99
CHFR-219ENST00000541341 TGIF2-C20orf24A0A0A6YYL0 155 aa8.87□□□□□ -0.99
CHFR-219ENST00000541341 A0A1W2PP11 408 aa8.87□□□□□ -0.99
CHFR-219ENST00000541341 IGSF23A1L1A6 192 aa8.87□□□□□ -0.99
CHFR-219ENST00000541341 NKX2-6A6NCS4 301 aa8.87□□□□□ -0.99
CHFR-219ENST00000541341 H7BYZ3 331 aa8.87□□□□□ -0.99
CHFR-219ENST00000541341 TCAPO15273 167 aa8.87□□□□□ -0.99
CHFR-219ENST00000541341 SSSCA1O60232 199 aa8.87□□□□□ -0.99
CHFR-219ENST00000541341 RAMP1O60894 148 aa8.87□□□□□ -0.99
CHFR-219ENST00000541341 NEURL1O76050 574 aa8.87□□□□□ -0.99
CHFR-219ENST00000541341 CLDN14O95500 239 aa8.87□□□□□ -0.99
CHFR-219ENST00000541341 CXCL1P09341 107 aa8.87□□□□□ -0.99
CHFR-219ENST00000541341 CYB561P49447 251 aa8.87□□□□□ -0.99
CHFR-219ENST00000541341 CLDN17P56750 224 aa8.87□□□□□ -0.99
CHFR-219ENST00000541341 ERVFRD-1P60508 538 aa8.87□□□□□ -0.99
CHFR-219ENST00000541341 PAFAH1B2P68402 229 aa8.87□□□□□ -0.99
CHFR-219ENST00000541341 ENDOGQ14249 297 aaKnown RBP8.87□□□□□ -0.99
CHFR-219ENST00000541341 GAMTQ14353 236 aa8.87□□□□□ -0.99
CHFR-219ENST00000541341 BSXQ3C1V8 233 aa8.87□□□□□ -0.99
CHFR-219ENST00000541341 NMSQ5H8A3 153 aa8.87□□□□□ -0.99
CHFR-219ENST00000541341 RIPPLY2Q5TAB7 128 aa8.87□□□□□ -0.99
CHFR-219ENST00000541341 MEX3BQ6ZN04 569 aaKnown RBP8.87□□□□□ -0.99
CHFR-219ENST00000541341 TBC1D26Q86UD7 250 aa8.87□□□□□ -0.99
CHFR-219ENST00000541341 FADS6Q8N9I5 356 aa8.87□□□□□ -0.99
CHFR-219ENST00000541341 MDS2Q8NDY4 140 aa8.87□□□□□ -0.99
CHFR-219ENST00000541341 OR2M3Q8NG83 312 aa8.87□□□□□ -0.99
CHFR-219ENST00000541341 OR1F12Q8NHA8 337 aa8.87□□□□□ -0.99
CHFR-219ENST00000541341 FBXO17Q96EF6 278 aa8.87□□□□□ -0.99
CHFR-219ENST00000541341 REEP6Q96HR9 211 aa8.87□□□□□ -0.99
CHFR-219ENST00000541341 ULBP2Q9BZM5 246 aa8.87□□□□□ -0.99
CHFR-219ENST00000541341 PARP12Q9H0J9 701 aaKnown RBP8.87□□□□□ -0.99
CHFR-219ENST00000541341 SLC39A9Q9NUM3 307 aa8.87□□□□□ -0.99
CHFR-219ENST00000541341 PRR13Q9NZ81 148 aa8.87□□□□□ -0.99
CHFR-219ENST00000541341 PRSS50Q9UI38 385 aa8.87□□□□□ -0.99
CHFR-219ENST00000541341 INTS1Q8N201 2190 aaKnown RBP8.87□□□□□ -0.99
CHFR-219ENST00000541341 C2CD3Q4AC94 2353 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 A0A1B0GWJ7 208 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 C17orf112F2Z3M2 114 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 TUSC2O75896 110 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 KBTBD11O94819 623 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 HRASP01112 189 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 SOD3P08294 240 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 CD46P15529 392 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 OR10J1P30954 320 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 PTGDSP41222 190 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 FHITP49789 147 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 IDH3GP51553 393 aaPredicted RBP8.86□□□□□ -0.99
CHFR-219ENST00000541341 CEBPGP53567 150 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 DSCR4P56555 118 aaPredicted RBP8.86□□□□□ -0.99
CHFR-219ENST00000541341 ERVFC1-1P60608 527 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 NUTF2P61970 127 aaKnown RBP8.86□□□□□ -0.99
CHFR-219ENST00000541341 MEF2BQ02080 365 aaPredicted RBP8.86□□□□□ -0.99
CHFR-219ENST00000541341 RELQ04864 619 aaPredicted RBP8.86□□□□□ -0.99
CHFR-219ENST00000541341 GAGE1Q13065 139 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 MSMO1Q15800 293 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 TMEM249Q2WGJ8 235 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 SP6Q3SY56 376 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 RNFT1Q5M7Z0 435 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 FAM90A2PQ658T7 463 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 C1QL2Q7Z5L3 287 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 ZBTB34Q8NCN2 500 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 OR5D18Q8NGL1 313 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 NRGNQ92686 78 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 FRZBQ92765 325 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 ADGRG7Q96K78 797 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 LYZL4Q96KX0 146 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 CIB3Q96Q77 187 aaPredicted RBP8.86□□□□□ -0.99
CHFR-219ENST00000541341 TMEM204Q9BSN7 226 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 OR51I2Q9H344 312 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 LIN7CQ9NUP9 197 aaKnown RBP8.86□□□□□ -0.99
CHFR-219ENST00000541341 ZNF319Q9P2F9 582 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 GNG13Q9P2W3 67 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 LAMP3Q9UQV4 416 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 ATP23Q9Y6H3 246 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 ZNF407Q9C0G0 2248 aa8.86□□□□□ -0.99
CHFR-219ENST00000541341 KIAA1549Q9HCM3 1950 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 TRBV23-1A0A0A0MS06 115 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 XKRY2A2RUG3 117 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 MAP1LC3B2A6NCE7 125 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 IFITM10A6NMD0 228 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 FAM90A27PA6NNH2 459 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 CD300LBA8K4G0 201 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 NPIPB11E5RHQ5 1161 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 DEGS1O15121 323 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 ADAM20O43506 726 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 CHST1O43916 411 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 PDE6DO43924 150 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 LCATP04180 440 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 SP1P08047 785 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 DBHP09172 617 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 IL11P20809 199 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 CRYGSP22914 178 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 F2RP25116 425 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 OPRM1P35372 400 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 ZNF92Q03936 586 aa8.85□□□□□ -0.99
CHFR-219ENST00000541341 LRRC75BQ2VPJ9 315 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms