RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 COLCA1Q6ZS62 124 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 PPP1R32Q7Z5V6 425 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 TGIF2LXQ8IUE1 241 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 WDR61Q9GZS3 305 aaKnown RBP8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 PARLQ9H300 379 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 PRSS50Q9UI38 385 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 TRAPPC2LQ9UL33 140 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 FGF5P12034 268 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 CEACAM6P40199 344 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 GALR1P47211 349 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 IDH3GP51553 393 aaPredicted RBP8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 SSX2Q16385 188 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 LTC4SQ16873 150 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 NUFIP2Q7Z417 695 aaKnown RBP8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 REC114Q7Z4M0 266 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 WDR86Q86TI4 376 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 FAM58AQ8N1B3 248 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 SPEM1Q8N4L4 309 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 M1APQ8TC57 530 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 TAF15Q92804 592 aaKnown RBP eCLIP8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 C5orf30Q96GV9 206 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 PRDM14Q9GZV8 571 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 CDH20Q9HBT6 801 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 VAX2Q9UIW0 290 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 IGHV3-43A0A0B4J1X8 118 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 TSTD3H0UI37 97 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 DEGS1O15121 323 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 CYTIPO60759 359 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 PAGE4O60829 102 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 MT-CO3P00414 261 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 PFN1P07737 140 aaKnown RBP8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 IGHV3-43DP0DP04 118 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 NPPCP23582 126 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 MAGEA5P43359 124 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 PKIAP61925 76 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 MEF2BQ02080 365 aaPredicted RBP8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 PMS2P11Q13670 270 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 LRRC75BQ2VPJ9 315 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 FGFRL1Q8N441 504 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 DRAM1Q8N682 238 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 OR1P1Q8NH06 330 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 WDYHV1Q96HA8 205 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 RAB40CQ96S21 281 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 WDR54Q9H977 334 aa8.75□□□□□ -1.01
CDC42SE1-207ENST00000540998 KALRNO60229 2985 aa8.74□□□□□ -1.01
CDC42SE1-207ENST00000540998 DEFB108AA8MXU0 73 aa8.74□□□□□ -1.01
CDC42SE1-207ENST00000540998 NUPR1O60356 82 aa8.74□□□□□ -1.01
CDC42SE1-207ENST00000540998 ZG16O60844 167 aa8.74□□□□□ -1.01
CDC42SE1-207ENST00000540998 PDGFBP01127 241 aaPredicted RBP8.74□□□□□ -1.01
CDC42SE1-207ENST00000540998 BSXQ3C1V8 233 aa8.74□□□□□ -1.01
CDC42SE1-207ENST00000540998 LINC00696Q6ZRV3 163 aa8.74□□□□□ -1.01
CDC42SE1-207ENST00000540998 TCF23Q7RTU1 214 aa8.74□□□□□ -1.01
CDC42SE1-207ENST00000540998 OR1L1Q8NH94 360 aa8.74□□□□□ -1.01
CDC42SE1-207ENST00000540998 UBE2ZQ9H832 354 aaPredicted RBP8.74□□□□□ -1.01
CDC42SE1-207ENST00000540998 ADGRG4Q8IZF6 3080 aa8.74□□□□□ -1.01
CDC42SE1-207ENST00000540998 ELOA3CA0A087WX78 387 aaPredicted RBP8.74□□□□□ -1.01
CDC42SE1-207ENST00000540998 H7BYZ3 331 aa8.74□□□□□ -1.01
CDC42SE1-207ENST00000540998 CDIPTO14735 213 aa8.74□□□□□ -1.01
CDC42SE1-207ENST00000540998 WNT9BO14905 357 aa8.74□□□□□ -1.01
CDC42SE1-207ENST00000540998 G0S2P27469 103 aa8.74□□□□□ -1.01
CDC42SE1-207ENST00000540998 GFRA1P56159 465 aa8.74□□□□□ -1.01
CDC42SE1-207ENST00000540998 OR8G1Q15617 311 aa8.74□□□□□ -1.01
CDC42SE1-207ENST00000540998 TMEM41BQ5BJD5 291 aa8.74□□□□□ -1.01
CDC42SE1-207ENST00000540998 ZNF826PQ6ZT77 177 aa8.74□□□□□ -1.01
CDC42SE1-207ENST00000540998 TIPARPQ7Z3E1 657 aaKnown RBP8.74□□□□□ -1.01
CDC42SE1-207ENST00000540998 TMEM183AQ8IXX5 376 aa8.74□□□□□ -1.01
CDC42SE1-207ENST00000540998 DUSP23Q9BVJ7 150 aa8.74□□□□□ -1.01
CDC42SE1-207ENST00000540998 GVINP1Q7Z2Y8 2422 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 TRAV1-1A0A0B4J248 108 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 TRAV38-1A0A0B4J264 116 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 RBMXL2O75526 392 aaKnown RBP8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 OR2H2O95918 312 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 GRPP07492 148 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 TMEM241Q24JQ0 296 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 ZNF114Q8NC26 417 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 Q8NFD4 153 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 OR52L2PQ8NGH6 319 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 OR13D1Q8NGV5 346 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 RFESDQ8TAC1 157 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 MBD3L1Q8WWY6 194 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 PITPNC1Q9UKF7 332 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 TACC2O95359 2948 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 TNCP24821 2201 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 TRBV24-1A0A075B6N3 115 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 SLC31A2O15432 143 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 CASP6P55212 293 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 RIPPLY2Q5TAB7 128 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 MRGPRGQ86SM5 289 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 TMEM256Q8N2U0 113 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 SDSLQ96GA7 329 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 FAM234AQ9H0X4 552 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 TMEM9BQ9NQ34 198 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 CBLN4Q9NTU7 201 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 TCFL5Q9UL49 500 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 MRPS17Q9Y2R5 130 aaKnown RBP8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 S1PR2O95136 353 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 OPN1MWP04001 364 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 OPN1MW2P0DN77 364 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 OPN1MW3P0DN78 364 aa8.73□□□□□ -1.01
CDC42SE1-207ENST00000540998 FGF7P21781 194 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms