RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 UBALD1Q8TB05 177 aa14.19□□□□□ -0.14
CLSTN3-210ENST00000540931 GIMAP1Q8WWP7 306 aa14.19□□□□□ -0.14
CLSTN3-210ENST00000540931 OR2W1Q9Y3N9 320 aa14.19□□□□□ -0.14
CLSTN3-210ENST00000540931 FAM172BPA6NC97 362 aa14.18□□□□□ -0.14
CLSTN3-210ENST00000540931 ZNF736B4DX44 427 aaPredicted RBP14.18□□□□□ -0.14
CLSTN3-210ENST00000540931 HSD17B6O14756 317 aa14.18□□□□□ -0.14
CLSTN3-210ENST00000540931 IFNA6P05013 189 aa14.18□□□□□ -0.14
CLSTN3-210ENST00000540931 IER3P46695 156 aa14.18□□□□□ -0.14
CLSTN3-210ENST00000540931 LUMP51884 338 aaPredicted RBP14.18□□□□□ -0.14
CLSTN3-210ENST00000540931 DLX1P56177 255 aa14.18□□□□□ -0.14
CLSTN3-210ENST00000540931 MEF2DQ14814 521 aa14.18□□□□□ -0.14
CLSTN3-210ENST00000540931 HERPUD1Q15011 391 aa14.18□□□□□ -0.14
CLSTN3-210ENST00000540931 MSMO1Q15800 293 aa14.18□□□□□ -0.14
CLSTN3-210ENST00000540931 LPCAT3Q6P1A2 487 aa14.18□□□□□ -0.14
CLSTN3-210ENST00000540931 OVCH2Q7RTZ1 564 aa14.18□□□□□ -0.14
CLSTN3-210ENST00000540931 THNSL2Q86YJ6 484 aa14.18□□□□□ -0.14
CLSTN3-210ENST00000540931 TGIF2LXQ8IUE1 241 aa14.18□□□□□ -0.14
CLSTN3-210ENST00000540931 LYG1Q8N1E2 194 aa14.18□□□□□ -0.14
CLSTN3-210ENST00000540931 GVQW1Q8N7I0 195 aa14.18□□□□□ -0.14
CLSTN3-210ENST00000540931 SIGLECL1Q8N7X8 197 aa14.18□□□□□ -0.14
CLSTN3-210ENST00000540931 GDPD1Q8N9F7 314 aa14.18□□□□□ -0.14
CLSTN3-210ENST00000540931 TMEM229BQ8NBD8 167 aa14.18□□□□□ -0.14
CLSTN3-210ENST00000540931 C22orf15Q8WYQ4 148 aa14.18□□□□□ -0.14
CLSTN3-210ENST00000540931 MAFIPQ8WZ33 124 aa14.18□□□□□ -0.14
CLSTN3-210ENST00000540931 AKR1E2Q96JD6 320 aa14.18□□□□□ -0.14
CLSTN3-210ENST00000540931 C11orf54Q9H0W9 315 aaPredicted RBP14.18□□□□□ -0.14
CLSTN3-210ENST00000540931 IGKV1-6A0A0C4DH72 117 aa14.17□□□□□ -0.14
CLSTN3-210ENST00000540931 RNF212BA8MTL3 300 aa14.17□□□□□ -0.14
CLSTN3-210ENST00000540931 FAM106CPP0CH98 169 aa14.17□□□□□ -0.14
CLSTN3-210ENST00000540931 FAUP35544 74 aaKnown RBP14.17□□□□□ -0.14
CLSTN3-210ENST00000540931 TSPAN5P62079 268 aa14.17□□□□□ -0.14
CLSTN3-210ENST00000540931 DYRK1AQ13627 763 aa14.17□□□□□ -0.14
CLSTN3-210ENST00000540931 GNMTQ14749 295 aa14.17□□□□□ -0.14
CLSTN3-210ENST00000540931 PYDC2Q56P42 97 aa14.17□□□□□ -0.14
CLSTN3-210ENST00000540931 VAX1Q5SQQ9 334 aa14.17□□□□□ -0.14
CLSTN3-210ENST00000540931 DHRS11Q6UWP2 260 aa14.17□□□□□ -0.14
CLSTN3-210ENST00000540931 LHFPL4Q7Z7J7 247 aa14.17□□□□□ -0.14
CLSTN3-210ENST00000540931 BCL6BQ8N143 479 aaPredicted RBP14.17□□□□□ -0.14
CLSTN3-210ENST00000540931 ARRDC1Q8N5I2 433 aa14.17□□□□□ -0.14
CLSTN3-210ENST00000540931 ZBTB34Q8NCN2 500 aa14.17□□□□□ -0.14
CLSTN3-210ENST00000540931 OR6F1Q8NGZ6 308 aa14.17□□□□□ -0.14
CLSTN3-210ENST00000540931 OR52I2Q8NH67 350 aa14.17□□□□□ -0.14
CLSTN3-210ENST00000540931 LEAP2Q969E1 77 aa14.17□□□□□ -0.14
CLSTN3-210ENST00000540931 SSX3Q99909 188 aa14.17□□□□□ -0.14
CLSTN3-210ENST00000540931 AGMATQ9BSE5 352 aa14.17□□□□□ -0.14
CLSTN3-210ENST00000540931 OR1A1Q9P1Q5 309 aa14.17□□□□□ -0.14
CLSTN3-210ENST00000540931 HILPDAQ9Y5L2 63 aa14.17□□□□□ -0.14
CLSTN3-210ENST00000540931 PTHLHP12272 177 aa14.16□□□□□ -0.14
CLSTN3-210ENST00000540931 S100GP29377 79 aa14.16□□□□□ -0.14
CLSTN3-210ENST00000540931 MC5RP33032 325 aa14.16□□□□□ -0.14
CLSTN3-210ENST00000540931 GPR12P47775 334 aa14.16□□□□□ -0.14
CLSTN3-210ENST00000540931 ZNF134P52741 427 aa14.16□□□□□ -0.14
CLSTN3-210ENST00000540931 RNASE10Q5GAN6 216 aaKnown RBP14.16□□□□□ -0.14
CLSTN3-210ENST00000540931 C16orf82Q7Z2V1 217 aa14.16□□□□□ -0.14
CLSTN3-210ENST00000540931 Q8N402 240 aa14.16□□□□□ -0.14
CLSTN3-210ENST00000540931 RTN4IP1Q8WWV3 396 aaPredicted RBP14.16□□□□□ -0.14
CLSTN3-210ENST00000540931 SNAPC3Q92966 411 aa14.16□□□□□ -0.14
CLSTN3-210ENST00000540931 ST6GALNAC6Q969X2 333 aa14.16□□□□□ -0.14
CLSTN3-210ENST00000540931 ADTRPQ96IZ2 230 aa14.16□□□□□ -0.14
CLSTN3-210ENST00000540931 EHFQ9NZC4 300 aa14.16□□□□□ -0.14
CLSTN3-210ENST00000540931 RBMX2Q9Y388 322 aaKnown RBP14.16□□□□□ -0.14
CLSTN3-210ENST00000540931 IGKV1D-8A0A087WSZ0 117 aa14.15□□□□□ -0.14
CLSTN3-210ENST00000540931 MEIS3P1A6NDR6 274 aa14.15□□□□□ -0.14
CLSTN3-210ENST00000540931 TUSC2O75896 110 aa14.15□□□□□ -0.14
CLSTN3-210ENST00000540931 IGHV3-7P01780 117 aa14.15□□□□□ -0.14
CLSTN3-210ENST00000540931 CD1BP29016 333 aa14.15□□□□□ -0.14
CLSTN3-210ENST00000540931 ECI1P42126 302 aa14.15□□□□□ -0.14
CLSTN3-210ENST00000540931 HERV-K104P61576 105 aa14.15□□□□□ -0.14
CLSTN3-210ENST00000540931 PRB3Q04118 309 aaPredicted RBP14.15□□□□□ -0.14
CLSTN3-210ENST00000540931 ZNF833PQ6ZTB9 187 aa14.15□□□□□ -0.14
CLSTN3-210ENST00000540931 AJUBAQ96IF1 538 aa14.15□□□□□ -0.14
CLSTN3-210ENST00000540931 THAP7Q9BT49 309 aaPredicted RBP14.15□□□□□ -0.14
CLSTN3-210ENST00000540931 IFI27L2Q9H2X8 130 aa14.15□□□□□ -0.14
CLSTN3-210ENST00000540931 KLK11Q9UBX7 282 aa14.15□□□□□ -0.14
CLSTN3-210ENST00000540931 IGHV1-3A0A0C4DH29 117 aa14.14□□□□□ -0.15
CLSTN3-210ENST00000540931 M0QZK8 103 aa14.14□□□□□ -0.15
CLSTN3-210ENST00000540931 OR8U9P0C7N5 309 aa14.14□□□□□ -0.15
CLSTN3-210ENST00000540931 HLA-DMAP28067 261 aa14.14□□□□□ -0.15
CLSTN3-210ENST00000540931 FCGR2CP31995 323 aa14.14□□□□□ -0.15
CLSTN3-210ENST00000540931 HRH1P35367 487 aa14.14□□□□□ -0.15
CLSTN3-210ENST00000540931 INPP1P49441 399 aa14.14□□□□□ -0.15
CLSTN3-210ENST00000540931 CBX3Q13185 183 aa14.14□□□□□ -0.15
CLSTN3-210ENST00000540931 HABP2Q14520 560 aaPredicted RBP14.14□□□□□ -0.15
CLSTN3-210ENST00000540931 LYSMD2Q8IV50 215 aa14.14□□□□□ -0.15
CLSTN3-210ENST00000540931 ZNF645Q8N7E2 425 aa14.14□□□□□ -0.15
CLSTN3-210ENST00000540931 OR8U1Q8NH10 309 aa14.14□□□□□ -0.15
CLSTN3-210ENST00000540931 CAPSLQ8WWF8 208 aa14.14□□□□□ -0.15
CLSTN3-210ENST00000540931 ZNF48Q96MX3 618 aaPredicted RBP14.14□□□□□ -0.15
CLSTN3-210ENST00000540931 VPREB3Q9UKI3 123 aa14.14□□□□□ -0.15
CLSTN3-210ENST00000540931 V9GYH0 126 aa14.14□□□□□ -0.15
CLSTN3-210ENST00000540931 CUBNO60494 3623 aa14.14□□□□□ -0.15
CLSTN3-210ENST00000540931 A0A1W2PPE3 182 aa14.13□□□□□ -0.15
CLSTN3-210ENST00000540931 OR5H14A6NHG9 310 aa14.13□□□□□ -0.15
CLSTN3-210ENST00000540931 DISC1C4P0D8 188 aa14.13□□□□□ -0.15
CLSTN3-210ENST00000540931 ST8SIA5O15466 376 aa14.13□□□□□ -0.15
CLSTN3-210ENST00000540931 HOXA3O43365 443 aaPredicted RBP14.13□□□□□ -0.15
CLSTN3-210ENST00000540931 PPYP01298 95 aa14.13□□□□□ -0.15
CLSTN3-210ENST00000540931 CD74P04233 296 aa14.13□□□□□ -0.15
CLSTN3-210ENST00000540931 CRYBA1P05813 215 aa14.13□□□□□ -0.15
CLSTN3-210ENST00000540931 RNASE1P07998 156 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms