RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 KLRD1Q13241 179 aa8.56□□□□□ -1.04
VPS33A-204ENST00000540669 ZNF833PQ6ZTB9 187 aa8.56□□□□□ -1.04
VPS33A-204ENST00000540669 PRR18Q8N4B5 295 aa8.56□□□□□ -1.04
VPS33A-204ENST00000540669 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.56□□□□□ -1.04
VPS33A-204ENST00000540669 OR51S1Q8NGJ8 323 aa8.56□□□□□ -1.04
VPS33A-204ENST00000540669 IL1F10Q8WWZ1 152 aa8.56□□□□□ -1.04
VPS33A-204ENST00000540669 PRRT1Q99946 306 aa8.56□□□□□ -1.04
VPS33A-204ENST00000540669 SUCNR1Q9BXA5 334 aa8.56□□□□□ -1.04
VPS33A-204ENST00000540669 BEX2Q9BXY8 128 aa8.56□□□□□ -1.04
VPS33A-204ENST00000540669 MMP28Q9H239 520 aa8.56□□□□□ -1.04
VPS33A-204ENST00000540669 ZNRD1Q9P1U0 126 aa8.56□□□□□ -1.04
VPS33A-204ENST00000540669 GNG12Q9UBI6 72 aa8.56□□□□□ -1.04
VPS33A-204ENST00000540669 ZNF69Q9UC07 566 aa8.56□□□□□ -1.04
VPS33A-204ENST00000540669 AUP1Q9Y679 476 aa8.56□□□□□ -1.04
VPS33A-204ENST00000540669 RGS11O94810 467 aa8.55□□□□□ -1.04
VPS33A-204ENST00000540669 NDUFB6O95139 128 aa8.55□□□□□ -1.04
VPS33A-204ENST00000540669 IGHV4-38-2P0DP08 117 aa8.55□□□□□ -1.04
VPS33A-204ENST00000540669 FAUP35544 74 aaKnown RBP8.55□□□□□ -1.04
VPS33A-204ENST00000540669 SRP14P37108 136 aaKnown RBP8.55□□□□□ -1.04
VPS33A-204ENST00000540669 OR3A3P47888 321 aa8.55□□□□□ -1.04
VPS33A-204ENST00000540669 RAB7AP51149 207 aa8.55□□□□□ -1.04
VPS33A-204ENST00000540669 RND3P61587 244 aa8.55□□□□□ -1.04
VPS33A-204ENST00000540669 ZNF816Q0VGE8 651 aaPredicted RBP8.55□□□□□ -1.04
VPS33A-204ENST00000540669 MIDNQ504T8 468 aa8.55□□□□□ -1.04
VPS33A-204ENST00000540669 ABHD12Q8N2K0 398 aa8.55□□□□□ -1.04
VPS33A-204ENST00000540669 DUSP18Q8NEJ0 188 aa8.55□□□□□ -1.04
VPS33A-204ENST00000540669 OR2AK2Q8NG84 335 aa8.55□□□□□ -1.04
VPS33A-204ENST00000540669 OR10V1Q8NGI7 309 aa8.55□□□□□ -1.04
VPS33A-204ENST00000540669 OR13D1Q8NGV5 346 aa8.55□□□□□ -1.04
VPS33A-204ENST00000540669 TERB2Q8NHR7 220 aa8.55□□□□□ -1.04
VPS33A-204ENST00000540669 LEAP2Q969E1 77 aa8.55□□□□□ -1.04
VPS33A-204ENST00000540669 ZNF2Q9BSG1 426 aaPredicted RBP8.55□□□□□ -1.04
VPS33A-204ENST00000540669 RSRP1Q9BUV0 290 aa8.55□□□□□ -1.04
VPS33A-204ENST00000540669 GHITMQ9H3K2 345 aa8.55□□□□□ -1.04
VPS33A-204ENST00000540669 HEXA-AS1Q9H8Q6 139 aa8.55□□□□□ -1.04
VPS33A-204ENST00000540669 ZNF221Q9UK13 617 aa8.55□□□□□ -1.04
VPS33A-204ENST00000540669 TBL2Q9Y4P3 447 aaKnown RBP8.55□□□□□ -1.04
VPS33A-204ENST00000540669 NIPBLQ6KC79 2804 aaeCLIP8.54□□□□□ -1.04
VPS33A-204ENST00000540669 SAA2-SAA4A0A096LPE2 208 aa8.54□□□□□ -1.04
VPS33A-204ENST00000540669 TRAV40A0A0B4J280 105 aa8.54□□□□□ -1.04
VPS33A-204ENST00000540669 IGHV1-69DA0A0B4J2H0 117 aa8.54□□□□□ -1.04
VPS33A-204ENST00000540669 A0A1W2PPI3 338 aa8.54□□□□□ -1.04
VPS33A-204ENST00000540669 FAM172BPA6NC97 362 aa8.54□□□□□ -1.04
VPS33A-204ENST00000540669 DISC1C4P0D8 188 aa8.54□□□□□ -1.04
VPS33A-204ENST00000540669 INAFM1C9JVW0 142 aa8.54□□□□□ -1.04
VPS33A-204ENST00000540669 ST8SIA5O15466 376 aa8.54□□□□□ -1.04
VPS33A-204ENST00000540669 PTTG1O95997 202 aa8.54□□□□□ -1.04
VPS33A-204ENST00000540669 IGHV1-69P01742 117 aa8.54□□□□□ -1.04
VPS33A-204ENST00000540669 SAA2P0DJI9 122 aaPredicted RBP8.54□□□□□ -1.04
VPS33A-204ENST00000540669 GNRHRP30968 328 aa8.54□□□□□ -1.04
VPS33A-204ENST00000540669 CEACAM6P40199 344 aa8.54□□□□□ -1.04
VPS33A-204ENST00000540669 ECI1P42126 302 aa8.54□□□□□ -1.04
VPS33A-204ENST00000540669 BPIFB3P59826 476 aa8.54□□□□□ -1.04
VPS33A-204ENST00000540669 MINOS1Q5TGZ0 78 aa8.54□□□□□ -1.04
VPS33A-204ENST00000540669 ZNF57Q68EA5 555 aaPredicted RBP8.54□□□□□ -1.04
VPS33A-204ENST00000540669 PNKDQ8N490 385 aa8.54□□□□□ -1.04
VPS33A-204ENST00000540669 ZNF645Q8N7E2 425 aa8.54□□□□□ -1.04
VPS33A-204ENST00000540669 ZDHHC22Q8N966 263 aa8.54□□□□□ -1.04
VPS33A-204ENST00000540669 BVESQ8NE79 360 aa8.54□□□□□ -1.04
VPS33A-204ENST00000540669 OR6F1Q8NGZ6 308 aa8.54□□□□□ -1.04
VPS33A-204ENST00000540669 DDB2Q92466 427 aa8.54□□□□□ -1.04
VPS33A-204ENST00000540669 ZNF486Q96H40 463 aaPredicted RBP8.54□□□□□ -1.04
VPS33A-204ENST00000540669 SLC25A21Q9BQT8 299 aaPredicted RBP8.54□□□□□ -1.04
VPS33A-204ENST00000540669 GINS4Q9BRT9 223 aa8.54□□□□□ -1.04
VPS33A-204ENST00000540669 PCGF1Q9BSM1 259 aa8.54□□□□□ -1.04
VPS33A-204ENST00000540669 PRDM13Q9H4Q3 707 aa8.54□□□□□ -1.04
VPS33A-204ENST00000540669 C5orf66Q9H5L9 145 aa8.54□□□□□ -1.04
VPS33A-204ENST00000540669 C7orf69Q9H7B7 122 aa8.54□□□□□ -1.04
VPS33A-204ENST00000540669 GPR132Q9UNW8 380 aa8.54□□□□□ -1.04
VPS33A-204ENST00000540669 VSIG4Q9Y279 399 aa8.54□□□□□ -1.04
VPS33A-204ENST00000540669 MINOS1-NBL1R4GNA1 71 aa8.54□□□□□ -1.04
VPS33A-204ENST00000540669 OOSP1A8MZH6 123 aa8.53□□□□□ -1.04
VPS33A-204ENST00000540669 BUB1B-PAK6H3BSN5 160 aa8.53□□□□□ -1.04
VPS33A-204ENST00000540669 HSPA12AO43301 675 aa8.53□□□□□ -1.04
VPS33A-204ENST00000540669 CTSDP07339 412 aaPredicted RBP8.53□□□□□ -1.04
VPS33A-204ENST00000540669 SRD5A1P18405 259 aa8.53□□□□□ -1.04
VPS33A-204ENST00000540669 COX7A1P24310 79 aa8.53□□□□□ -1.04
VPS33A-204ENST00000540669 NFYBP25208 207 aa8.53□□□□□ -1.04
VPS33A-204ENST00000540669 SAA4P35542 130 aa8.53□□□□□ -1.04
VPS33A-204ENST00000540669 CCR6P51684 374 aa8.53□□□□□ -1.04
VPS33A-204ENST00000540669 LUMP51884 338 aaPredicted RBP8.53□□□□□ -1.04
VPS33A-204ENST00000540669 PRB3Q04118 309 aaPredicted RBP8.53□□□□□ -1.04
VPS33A-204ENST00000540669 OXA1LQ15070 435 aa8.53□□□□□ -1.04
VPS33A-204ENST00000540669 RBMS2Q15434 407 aaKnown RBP8.53□□□□□ -1.04
VPS33A-204ENST00000540669 LTC4SQ16873 150 aa8.53□□□□□ -1.04
VPS33A-204ENST00000540669 IDO2Q6ZQW0 420 aa8.53□□□□□ -1.04
VPS33A-204ENST00000540669 NRARPQ7Z6K4 114 aa8.53□□□□□ -1.04
VPS33A-204ENST00000540669 TMEM17Q86X19 198 aa8.53□□□□□ -1.04
VPS33A-204ENST00000540669 DYNAPQ8N1N2 210 aa8.53□□□□□ -1.04
VPS33A-204ENST00000540669 DRAM1Q8N682 238 aa8.53□□□□□ -1.04
VPS33A-204ENST00000540669 CFHR4Q92496 578 aa8.53□□□□□ -1.04
VPS33A-204ENST00000540669 TMEM230Q96A57 120 aa8.53□□□□□ -1.04
VPS33A-204ENST00000540669 RTBDNQ9BSG5 229 aaPredicted RBP8.53□□□□□ -1.04
VPS33A-204ENST00000540669 OR2D2Q9H210 308 aa8.53□□□□□ -1.04
VPS33A-204ENST00000540669 SDHAF2Q9NX18 166 aa8.53□□□□□ -1.04
VPS33A-204ENST00000540669 CUBNO60494 3623 aa8.53□□□□□ -1.04
VPS33A-204ENST00000540669 A0A1W2PPE3 182 aa8.52□□□□□ -1.05
VPS33A-204ENST00000540669 VGLL3A8MV65 326 aa8.52□□□□□ -1.05
VPS33A-204ENST00000540669 NPFFO15130 113 aa8.52□□□□□ -1.05
VPS33A-204ENST00000540669 CRLF1O75462 422 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms