RNA–Protein interactions for RNA: ENST00000540447.5

YBX3-208, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 6,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-208ENST00000540447 Q8IYB0 196 aa7.62□□□□□ -1.19
YBX3-208ENST00000540447 OR8B12Q8NGG6 310 aa7.62□□□□□ -1.19
YBX3-208ENST00000540447 CD99L2Q8TCZ2 262 aa7.62□□□□□ -1.19
YBX3-208ENST00000540447 SOSTQ9BQB4 213 aa7.62□□□□□ -1.19
YBX3-208ENST00000540447 SSBP3Q9BWW4 388 aaPredicted RBP7.62□□□□□ -1.19
YBX3-208ENST00000540447 CLEC1BQ9P126 229 aa7.62□□□□□ -1.19
YBX3-208ENST00000540447 HDGFL3Q9Y3E1 203 aa7.62□□□□□ -1.19
YBX3-208ENST00000540447 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.62□□□□□ -1.19
YBX3-208ENST00000540447 ADAMTSL4Q6UY14 1074 aa7.62□□□□□ -1.19
YBX3-208ENST00000540447 KLHDC9Q8NEP7 349 aa7.62□□□□□ -1.19
YBX3-208ENST00000540447 BAHD1Q8TBE0 780 aaPredicted RBP7.62□□□□□ -1.19
YBX3-208ENST00000540447 FAM174AQ8TBP5 190 aa7.62□□□□□ -1.19
YBX3-208ENST00000540447 ZNF385AQ96PM9 386 aaKnown RBP7.62□□□□□ -1.19
YBX3-208ENST00000540447 CSTL1Q9H114 145 aa7.62□□□□□ -1.19
YBX3-208ENST00000540447 NPVFQ9HCQ7 196 aa7.62□□□□□ -1.19
YBX3-208ENST00000540447 KLHDC2Q9Y2U9 406 aa7.62□□□□□ -1.19
YBX3-208ENST00000540447 APOHP02749 345 aaPredicted RBP7.62□□□□□ -1.19
YBX3-208ENST00000540447 UCP1P25874 307 aa7.62□□□□□ -1.19
YBX3-208ENST00000540447 C2orf83Q53S99 150 aa7.62□□□□□ -1.19
YBX3-208ENST00000540447 AQP3Q92482 292 aa7.62□□□□□ -1.19
YBX3-208ENST00000540447 YBX2Q9Y2T7 364 aaKnown RBP7.62□□□□□ -1.19
YBX3-208ENST00000540447 UCP2P55851 309 aa7.62□□□□□ -1.19
YBX3-208ENST00000540447 TMEM155Q4W5P6 130 aa7.62□□□□□ -1.19
YBX3-208ENST00000540447 CENPWQ5EE01 88 aa7.62□□□□□ -1.19
YBX3-208ENST00000540447 Q6ZSR6 202 aa7.62□□□□□ -1.19
YBX3-208ENST00000540447 MOGAT3Q86VF5 341 aa7.62□□□□□ -1.19
YBX3-208ENST00000540447 DNAJB12Q9NXW2 375 aaKnown RBP7.62□□□□□ -1.19
YBX3-208ENST00000540447 ZNF391Q9UJN7 358 aa7.62□□□□□ -1.19
YBX3-208ENST00000540447 DSPPQ9NZW4 1301 aa7.62□□□□□ -1.19
YBX3-208ENST00000540447 TRBV5-4A0A0C4DH59 114 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 CTLA4P16410 223 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 IGFBP4P22692 258 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 FOLR3P41439 243 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 DUSP2Q05923 314 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 SRSF6Q13247 344 aaKnown RBP7.61□□□□□ -1.19
YBX3-208ENST00000540447 METRNLQ641Q3 311 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 UBALD2Q8IYN6 164 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 POLR3KQ9Y2Y1 108 aaPredicted RBP7.61□□□□□ -1.19
YBX3-208ENST00000540447 MRPS16Q9Y3D3 137 aaKnown RBP7.61□□□□□ -1.19
YBX3-208ENST00000540447 MUC21A0A0G2JKD1 596 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 MUC21A0A140T8X8 626 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 LRRC30A6NM36 301 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 J3QR06 171 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 F11P03951 625 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 RNASE1P07998 156 aaKnown RBP7.61□□□□□ -1.19
YBX3-208ENST00000540447 MUC21Q5SSG8 566 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 TCF24Q7RTU0 167 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 MYEOVQ96EZ4 313 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 hADV38S2A0JD32 116 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 HOXC4P09017 264 aaPredicted RBP7.61□□□□□ -1.19
YBX3-208ENST00000540447 GNG3P63215 75 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 FADS6Q8N9I5 356 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 GPR146Q96CH1 333 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 TIMD4Q96H15 378 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 C20orf144Q9BQM9 153 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 RAXQ9Y2V3 346 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 TSPAN7P41732 249 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 SSR4P51571 173 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 SOX8P57073 446 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 SMIM20Q8N5G0 67 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 GPBAR1Q8TDU6 330 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 NAT6Q93015 286 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 C18orf15Q96N68 181 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 SPANXN1Q5VSR9 72 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 OR2I1PQ8NGU4 316 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 SERGEFQ9UGK8 458 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 DTX4Q9Y2E6 619 aa7.61□□□□□ -1.19
YBX3-208ENST00000540447 YAE1D1Q9NRH1 226 aa7.6□□□□□ -1.19
YBX3-208ENST00000540447 LAMA4Q16363 1823 aa7.6□□□□□ -1.19
YBX3-208ENST00000540447 IGHV4-39P01824 125 aa7.6□□□□□ -1.19
YBX3-208ENST00000540447 B4GALT1P15291 398 aa7.6□□□□□ -1.19
YBX3-208ENST00000540447 CCL14Q16627 93 aa7.6□□□□□ -1.19
YBX3-208ENST00000540447 RFLNBQ8N5W9 214 aa7.6□□□□□ -1.19
YBX3-208ENST00000540447 RFESDQ8TAC1 157 aa7.6□□□□□ -1.19
YBX3-208ENST00000540447 IGHV3-43A0A0B4J1X8 118 aa7.6□□□□□ -1.19
YBX3-208ENST00000540447 TRBV5-5A0A0J9YX44 114 aa7.6□□□□□ -1.19
YBX3-208ENST00000540447 IL2RAP01589 272 aa7.6□□□□□ -1.19
YBX3-208ENST00000540447 IGHV3-43DP0DP04 118 aa7.6□□□□□ -1.19
YBX3-208ENST00000540447 DRD1P21728 446 aa7.6□□□□□ -1.19
YBX3-208ENST00000540447 GPR6P46095 362 aaPredicted RBP7.6□□□□□ -1.19
YBX3-208ENST00000540447 PRSS8Q16651 343 aa7.6□□□□□ -1.19
YBX3-208ENST00000540447 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.6□□□□□ -1.19
YBX3-208ENST00000540447 MARS2Q96GW9 593 aaKnown RBP7.6□□□□□ -1.19
YBX3-208ENST00000540447 MGST2Q99735 147 aa7.6□□□□□ -1.19
YBX3-208ENST00000540447 PDFQ9HBH1 243 aa7.6□□□□□ -1.19
YBX3-208ENST00000540447 RRHO14718 337 aa7.6□□□□□ -1.19
YBX3-208ENST00000540447 CDIPTO14735 213 aa7.6□□□□□ -1.19
YBX3-208ENST00000540447 PRKNO60260 465 aaPredicted RBP7.6□□□□□ -1.19
YBX3-208ENST00000540447 GOSR1O95249 250 aa7.6□□□□□ -1.19
YBX3-208ENST00000540447 MPZP25189 248 aa7.6□□□□□ -1.19
YBX3-208ENST00000540447 LGALS4P56470 323 aa7.6□□□□□ -1.19
YBX3-208ENST00000540447 PPP1CAP62136 330 aa7.6□□□□□ -1.19
YBX3-208ENST00000540447 C19orf48Q6RUI8 117 aa7.6□□□□□ -1.19
YBX3-208ENST00000540447 OR9G4Q8NGQ1 327 aa7.6□□□□□ -1.19
YBX3-208ENST00000540447 PLPPR1Q8TBJ4 325 aa7.6□□□□□ -1.19
YBX3-208ENST00000540447 A0A087X0K7 114 aa7.6□□□□□ -1.19
YBX3-208ENST00000540447 A0A096LPE4 126 aa7.6□□□□□ -1.19
YBX3-208ENST00000540447 A0A1W2PPZ6 126 aa7.6□□□□□ -1.19
YBX3-208ENST00000540447 GAGE5Q13069 117 aa7.6□□□□□ -1.19
YBX3-208ENST00000540447 GAGE6Q13070 117 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms