RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 VN1R17PQ8TDU5 208 aa11.08□□□□□ -0.64
MSH6-210ENST00000540021 SSMEM1Q8WWF3 244 aa11.08□□□□□ -0.64
MSH6-210ENST00000540021 GALMQ96C23 342 aa11.08□□□□□ -0.64
MSH6-210ENST00000540021 A0A0G2JRQ6 117 aa11.08□□□□□ -0.64
MSH6-210ENST00000540021 HRASP01112 189 aa11.08□□□□□ -0.64
MSH6-210ENST00000540021 FGFRL1Q8N441 504 aa11.08□□□□□ -0.64
MSH6-210ENST00000540021 LRTM2Q8N967 370 aa11.08□□□□□ -0.64
MSH6-210ENST00000540021 DTD1Q8TEA8 209 aa11.08□□□□□ -0.64
MSH6-210ENST00000540021 RAB24Q969Q5 203 aa11.08□□□□□ -0.64
MSH6-210ENST00000540021 PSG11Q9UQ72 335 aa11.08□□□□□ -0.64
MSH6-210ENST00000540021 PPIHO43447 177 aaKnown RBP11.07□□□□□ -0.64
MSH6-210ENST00000540021 CD33P20138 364 aa11.07□□□□□ -0.64
MSH6-210ENST00000540021 PTGDSP41222 190 aa11.07□□□□□ -0.64
MSH6-210ENST00000540021 TCL1AP56279 114 aa11.07□□□□□ -0.64
MSH6-210ENST00000540021 ID3Q02535 119 aa11.07□□□□□ -0.64
MSH6-210ENST00000540021 SRD5A3Q9H8P0 318 aa11.07□□□□□ -0.64
MSH6-210ENST00000540021 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.07□□□□□ -0.64
MSH6-210ENST00000540021 PGPEP1LA6NFU8 196 aa11.07□□□□□ -0.64
MSH6-210ENST00000540021 ST8SIA5O15466 376 aa11.07□□□□□ -0.64
MSH6-210ENST00000540021 AMBPP02760 352 aa11.07□□□□□ -0.64
MSH6-210ENST00000540021 SERF2P84101 59 aa11.07□□□□□ -0.64
MSH6-210ENST00000540021 TRIM61Q5EBN2 209 aa11.07□□□□□ -0.64
MSH6-210ENST00000540021 OR51G1Q8NGK1 321 aa11.07□□□□□ -0.64
MSH6-210ENST00000540021 VAMP8Q9BV40 100 aa11.07□□□□□ -0.64
MSH6-210ENST00000540021 TMEM147Q9BVK8 224 aa11.07□□□□□ -0.64
MSH6-210ENST00000540021 SF3B5Q9BWJ5 86 aaKnown RBP11.07□□□□□ -0.64
MSH6-210ENST00000540021 TAAR3PQ9P1P4 343 aa11.07□□□□□ -0.64
MSH6-210ENST00000540021 FCN1O00602 326 aa11.07□□□□□ -0.64
MSH6-210ENST00000540021 RAB31Q13636 194 aa11.07□□□□□ -0.64
MSH6-210ENST00000540021 ZNF124Q15973 351 aa11.07□□□□□ -0.64
MSH6-210ENST00000540021 RSPO1Q2MKA7 263 aaPredicted RBP11.07□□□□□ -0.64
MSH6-210ENST00000540021 TMEM56Q96MV1 263 aa11.07□□□□□ -0.64
MSH6-210ENST00000540021 HIPK2Q9H2X6 1198 aa11.07□□□□□ -0.64
MSH6-210ENST00000540021 TMEM56-RWDD3S4R434 201 aa11.07□□□□□ -0.64
MSH6-210ENST00000540021 CTXND1A0A1B0GTU2 59 aa11.06□□□□□ -0.64
MSH6-210ENST00000540021 RHBDL1O75783 438 aa11.06□□□□□ -0.64
MSH6-210ENST00000540021 FABP6P51161 128 aa11.06□□□□□ -0.64
MSH6-210ENST00000540021 ERVFC1-1P60608 527 aa11.06□□□□□ -0.64
MSH6-210ENST00000540021 SIGLECL1Q8N7X8 197 aa11.06□□□□□ -0.64
MSH6-210ENST00000540021 CPEB3Q8NE35 698 aaKnown RBP11.06□□□□□ -0.64
MSH6-210ENST00000540021 DUSP13Q9UII6 198 aa11.06□□□□□ -0.64
MSH6-210ENST00000540021 RPH3ALQ9UNE2 315 aa11.06□□□□□ -0.64
MSH6-210ENST00000540021 FREM1Q5H8C1 2179 aa11.06□□□□□ -0.64
MSH6-210ENST00000540021 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.06□□□□□ -0.64
MSH6-210ENST00000540021 FCGR3BO75015 233 aa11.06□□□□□ -0.64
MSH6-210ENST00000540021 WNT5AP41221 380 aa11.06□□□□□ -0.64
MSH6-210ENST00000540021 ZIC4Q8N9L1 334 aa11.06□□□□□ -0.64
MSH6-210ENST00000540021 DLL3Q9NYJ7 618 aa11.06□□□□□ -0.64
MSH6-210ENST00000540021 PRUNE2Q8WUY3 3088 aa11.06□□□□□ -0.64
MSH6-210ENST00000540021 TIMM8AO60220 97 aaPredicted RBP11.06□□□□□ -0.64
MSH6-210ENST00000540021 KBTBD11O94819 623 aa11.06□□□□□ -0.64
MSH6-210ENST00000540021 CTSSP25774 331 aa11.06□□□□□ -0.64
MSH6-210ENST00000540021 HOXA6P31267 233 aa11.06□□□□□ -0.64
MSH6-210ENST00000540021 DUSP3P51452 185 aaPredicted RBP11.06□□□□□ -0.64
MSH6-210ENST00000540021 CEACAM21Q3KPI0 293 aa11.06□□□□□ -0.64
MSH6-210ENST00000540021 VHLLQ6RSH7 139 aa11.06□□□□□ -0.64
MSH6-210ENST00000540021 NOL4LQ96MY1 436 aaPredicted RBP11.06□□□□□ -0.64
MSH6-210ENST00000540021 POLDIP2Q9Y2S7 368 aa11.06□□□□□ -0.64
MSH6-210ENST00000540021 C1QTNF9BB2RNN3 333 aa11.05□□□□□ -0.64
MSH6-210ENST00000540021 ZG16O60844 167 aa11.05□□□□□ -0.64
MSH6-210ENST00000540021 PCOLCEQ15113 449 aa11.05□□□□□ -0.64
MSH6-210ENST00000540021 TMEM164Q5U3C3 297 aa11.05□□□□□ -0.64
MSH6-210ENST00000540021 GCNT2Q8N0V5 402 aa11.05□□□□□ -0.64
MSH6-210ENST00000540021 PHF7Q9BWX1 381 aaPredicted RBP11.05□□□□□ -0.64
MSH6-210ENST00000540021 WDR61Q9GZS3 305 aaKnown RBP11.05□□□□□ -0.64
MSH6-210ENST00000540021 ABCA1O95477 2261 aa11.05□□□□□ -0.64
MSH6-210ENST00000540021 CRISP2P16562 243 aa11.05□□□□□ -0.64
MSH6-210ENST00000540021 EPHA8P29322 1005 aaPredicted RBP11.05□□□□□ -0.64
MSH6-210ENST00000540021 LTBRP36941 435 aa11.05□□□□□ -0.64
MSH6-210ENST00000540021 TPPP2P59282 170 aa11.05□□□□□ -0.64
MSH6-210ENST00000540021 RPL23P62829 140 aaKnown RBP11.05□□□□□ -0.64
MSH6-210ENST00000540021 ALKBH6Q3KRA9 238 aa11.05□□□□□ -0.64
MSH6-210ENST00000540021 SLC25A53Q5H9E4 307 aa11.05□□□□□ -0.64
MSH6-210ENST00000540021 DCAF12Q5T6F0 453 aa11.05□□□□□ -0.64
MSH6-210ENST00000540021 TMPRSS7Q7RTY8 843 aa11.05□□□□□ -0.64
MSH6-210ENST00000540021 ZNF525Q8N782 197 aa11.05□□□□□ -0.64
MSH6-210ENST00000540021 ZDHHC16Q969W1 377 aa11.05□□□□□ -0.64
MSH6-210ENST00000540021 IER2Q9BTL4 223 aa11.05□□□□□ -0.64
MSH6-210ENST00000540021 REV3LO60673 3130 aa11.05□□□□□ -0.64
MSH6-210ENST00000540021 PRRC2CQ9Y520 2896 aaKnown RBP11.05□□□□□ -0.64
MSH6-210ENST00000540021 AESQ08117 197 aa11.05□□□□□ -0.64
MSH6-210ENST00000540021 TBC1D28Q2M2D7 210 aa11.05□□□□□ -0.64
MSH6-210ENST00000540021 LYPD6BQ8NI32 183 aa11.05□□□□□ -0.64
MSH6-210ENST00000540021 ABHD14BQ96IU4 210 aa11.05□□□□□ -0.64
MSH6-210ENST00000540021 CHRNA10Q9GZZ6 450 aa11.05□□□□□ -0.64
MSH6-210ENST00000540021 PTPRZ1P23471 2315 aaPredicted RBP11.05□□□□□ -0.64
MSH6-210ENST00000540021 USF3Q68DE3 2245 aa11.05□□□□□ -0.64
MSH6-210ENST00000540021 C2orf16Q68DN1 1984 aa11.05□□□□□ -0.64
MSH6-210ENST00000540021 EP300Q09472 2414 aaPredicted RBP11.05□□□□□ -0.64
MSH6-210ENST00000540021 H0Y8G0 127 aa11.04□□□□□ -0.64
MSH6-210ENST00000540021 OR7C2O60412 319 aa11.04□□□□□ -0.64
MSH6-210ENST00000540021 MT-CO2P00403 227 aa11.04□□□□□ -0.64
MSH6-210ENST00000540021 ARR3P36575 388 aa11.04□□□□□ -0.64
MSH6-210ENST00000540021 GPR12P47775 334 aa11.04□□□□□ -0.64
MSH6-210ENST00000540021 OR5I1Q13606 314 aa11.04□□□□□ -0.64
MSH6-210ENST00000540021 FAM90A2PQ658T7 463 aa11.04□□□□□ -0.64
MSH6-210ENST00000540021 OR52L2PQ8NGH6 319 aa11.04□□□□□ -0.64
MSH6-210ENST00000540021 IMMP2LQ96T52 175 aa11.04□□□□□ -0.64
MSH6-210ENST00000540021 PRDM13Q9H4Q3 707 aa11.04□□□□□ -0.64
MSH6-210ENST00000540021 NAT8BQ9UHF3 227 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms